BDGP Sequence Production Resources |
Search the DGRC for RE70695
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 706 |
Well: | 95 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31808-RC |
Protein status: | RE70695.pep: gold |
Sequenced Size: | 1941 |
Gene | Date | Evidence |
---|---|---|
CG5996 | 2002-01-01 | Sim4 clustering to Release 2 |
CR31808 | 2008-08-15 | Release 5.9 accounting |
CR31808 | 2008-12-18 | 5.12 accounting |
1941 bp (1941 high quality bases) assembled on 2002-05-23
GenBank Submission: AY118418.1
> RE70695.complete AGTTACTTGTTGCTCGCTCTCTCGTTGGCTCCCTCTCTCAATGAGCGCTG GTTGGGGCAATGGCAATTGTGGCTGCTGCTCAGCTTGGCGTTTTCATTCA ATCAGCTGAGTTCGCCGCGTTCGGTTTTCCCGCTGCCGATTCTGTTCACC GTTACACCGATCGAATATTACGCGTCTTGCGTCTGTAAAGGAACTGAAAC GCACCAGTTTTTGAGTTGGAAAATATCCCCAAAACAACAAGACTCGGCGA GAACGGAAAATTTGTTTGCTGCTTGTCACCTTCGAAAGTTATGTGTTCTG GCCTTTACCACTACTGAAATTTCTAGAGCGTTTCGGTCAGGGCCTACCTA GCTGAATCCAAAAAAAGGCAAGAAAGCTACAGGGCAGCCACCAGAAAGGA GCTGCCAACTTGCATATTACGCTTGTGCGTTTCGTTCGTTCCACGCTTGT GACCCGTAGCCCACGTCCACTTTTGTGGCGTGTGCAATCCAAAAGCCGCC AAGACGACTTACTCGATAATGAAGATGAGCTCGCCCAGGATCATGCAGCA GAAACGGAGCAGCAAGTCCTCCAATTCGTCGCGGGTCTCCATGACCACCT CGACGGCGGAGGAGAATCTCATAGAATCGAAGCTCTTCAGCTGGATGCGT CTATTCCGATTCGCCTCGCTGCTCTGCCGCGCCGAGTAACGGAGTTAGTC CATAAGATCGAAATACCCTCGATATCCTGTCCTCCTCCCAAGTGAAAAGA AACCACAAATTTTAAGATATGTAAATGCATATGTCAGATACTCGAACTAG TTGCCGCTTTTCAGTCAAGTTTTCCTATATATAATGAGACACCAACAGAA ACACCAAACTAATGTCACCCAAACTTTTCCAGCAATGTAGAGAATAAGCA TTACAAAATGAGTAAACAGAAATACCATGTTAAGTTTAAGCTGAAAAGCT GGGAATGTCAAACCCTTGGAGTCCAATATTTAATTTACTGTCCTTTTTTG GGAAATCGAAAACCATTTCGTTCAGTTAGCTCTTCACAATTAAGTCAATT TTTAGTGTAAATTCCGTTGAAACGGAATTTCTCGCGCCTTTCGTACCTTT TGTATTGTAATAAGTCAAAAAGAAGATAAGACACATACAAATTGCAAACT ACAAGCAAATAAATATTAAATCATAATCCACTTATTGCGTTTATTCGGGT TTATTAGTGCTTAAGTTTCGAGAACAGCCGACTACAACACGAGGTATATA TATTTTTGTAATTACAACACTGTTTTGCGTGTCACAAAATGGAAATACAC ACGAGTAGGAGGAACATCAAGAGAATCGTTTATGCAAGGCTATTAACTAG ATAAATACATATATTAACTAAAGAAGCGAACAAAAATGCAGTACTAACAA TTACAATACAATGTATACATGTAGAGGAATATATTTACACATCAAACTCG AATCGGAGTCTATGCAAATGCGCTTATCCAATAAAGATTAACACAAATTC ACAATAGTTATCCAAGCCCAGCAATATGAGAAGTGCATTTAACCCAAAGA AGTTGCCAAACGACAGCAATTGTTTTTAATACATTAGCAATGCAAAAACA CAATAGTGAAACAATTATCTTTATTTCTGTAAAACCTCAGAACGTACTAT AAATCAATGAAATAACTACGACAACAAAGAACAAATACAGTTATCAGAGA TTTTCCAAATTCAATTTTACTTATTAATTAGTTAGTAAGCCAAAATGCAA CCGTGCAACTTGAACATAACGGTACTAACGGTAATATCGGTAGTAGCGGT AAATGCCAATACAAAGAGAAAACTGTACTAGAACATAGCAATATCACTGC AGCAGATGTTTGTTGAGAAAAATGCAATAAATCGATATCGGTCAATAAAT AAAGTCTTTAAGCTGTTGAGTGTTCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nc_DMG2-MB6.chr2L.17.058.b | 1857 | nc_DMG2-MB6.chr2L.17.058.b | 1..1850 | 78..1927 | 9250 | 100 | Plus |
nc_DMG2-MB6.chr2L.17.058.d | 1506 | nc_DMG2-MB6.chr2L.17.058.d | 1..1506 | 78..1583 | 7530 | 100 | Plus |
nc_DMG2-MB6.chr2L.17.058.c | 587 | nc_DMG2-MB6.chr2L.17.058.c | 1..587 | 391..977 | 2935 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR31808-RA | 1830 | CR31808-RA | 1..1830 | 96..1925 | 9150 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 3452..3543 | 1687..1778 | 126 | 62.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16702995..16704498 | 422..1925 | 100 | <- | Minus |
chr2L | 16714474..16714894 | 1..421 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31808-RD | 1..171 | 519..689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31808-RC | 1..171 | 519..689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10996-RA | 325..343 | 846..864 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31808-RC | 1..171 | 519..689 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR31808-RA | 1..1830 | 96..1925 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cyt-c-d-RA | 1..334 | 1..334 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31808-RC | 1..1925 | 1..1925 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31808-RC | 5..1929 | 1..1925 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cyt-c-d-RA | 1..334 | 1..334 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31808-RC | 5..1929 | 1..1925 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16704286..16705789 | 422..1925 | 100 | <- | Minus |
2L | 16715771..16716191 | 1..421 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16704286..16705789 | 422..1925 | 100 | <- | Minus |
2L | 16715771..16716191 | 1..421 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16704286..16705789 | 422..1925 | 100 | <- | Minus |
2L | 16715771..16716191 | 1..421 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16704286..16705789 | 422..1925 | 100 | <- | Minus |
arm_2L | 16715771..16716191 | 1..421 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16704286..16705789 | 422..1925 | 100 | <- | Minus |
2L | 16715771..16716191 | 1..421 | 99 | Minus |
Translation from 0 to 350
> RE70695.hyp SCLLLALSLAPSLNERWLGQWQLWLLLSLAFSFNQLSSPRSVFPLPILFT VTPIEYYASCVCKGTETHQFLSWKISPKQQDSARTENLFAACHLRKLCVL AFTTTEISRAFRSGPT*
Translation from 518 to 688
> RE70695.pep MKMSSPRIMQQKRSSKSSNSSRVSMTTSTAEENLIESKLFSWMRLFRFAS LLCRAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24373-PA | 56 | GF24373-PA | 1..56 | 1..56 | 213 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20116-PA | 56 | GG20116-PA | 1..56 | 1..56 | 272 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10363-PA | 54 | GH10363-PA | 1..54 | 3..56 | 260 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31808-PC | 56 | CG31808-PC | 1..56 | 1..56 | 273 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21355-PA | 56 | GI21355-PA | 1..56 | 1..56 | 258 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19341-PA | 54 | GL19341-PA | 1..54 | 3..56 | 262 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25924-PA | 306 | GA25924-PA | 1..54 | 3..56 | 264 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17166-PA | 56 | GM17166-PA | 1..56 | 1..56 | 272 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21904-PA | 54 | GD21904-PA | 1..54 | 3..56 | 260 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11150-PA | 94 | GJ11150-PA | 39..94 | 1..56 | 272 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18179-PA | 59 | GK18179-PA | 1..59 | 1..56 | 199 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13172-PA | 56 | GE13172-PA | 1..56 | 1..56 | 272 | 100 | Plus |