BDGP Sequence Production Resources |
Search the DGRC for RE70722
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 707 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12082-RA |
Protein status: | RE70722.pep: gold |
Preliminary Size: | 2484 |
Sequenced Size: | 2798 |
Gene | Date | Evidence |
---|---|---|
CG12082 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12082 | 2002-06-10 | Blastp of sequenced clone |
CG12082 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12082 | 2008-04-29 | Release 5.5 accounting |
CG12082 | 2008-08-15 | Release 5.9 accounting |
CG12082 | 2008-12-18 | 5.12 accounting |
2798 bp (2798 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121697
> RE70722.complete AGTATTGAATAAACAACGATAGCCTGCAGCAGTCAAATTAAACTAATTGT GCTTATTGGGCGGCCAAATACGTAAATATCACTCAAAAGCCGTTATAAGG TACAAAAATAAGGCAGCTGCAAAAAAAATCAACTATACTATTTTACATTC GGTCCGTAAAGTTTATGAGAAAAGAGCTGCCTACAGGATTCCAGATACCG TTATGGAGGAACTACGCAAGCATTTATCCAAGGTGAACGTGCCATGCGCA TCCGGGGCGGGCAGTCCTCCCATCTACAAGGACGAGTGCGTCTACTCCTA TGACAATCCCGAGACGCCCACCGGTTTGTACGTGTGCCTGCACAGCTTTT TGGGCTTCGGCGAGGCGTATGTGCGGGAGTATGCCGACAAGACCGGCAAC CGGGTCTTCCTCCACATCCAGCGGGTGAAGACGATCAAGGAGGGCGCCGA CATGGAGGCCGAATGCGCGGAGTCGGAGGCAGGACCGGAACGGAAGATCA CCCGCCTGGCCATTGGCGTCGAGGGCGGCTACAACGAGTCGGACATGGCC AAGAAGTACGAGATCAAGGACACGTACAGCATCGTGGTGGCTCCGCACCT GGATAAGAAGCTGCCCTATCCGGATCCAGAGCTGCCCATGCGTGTCACCC AGTCGGTGGAAGCGATCCTGGCCGCCGACTCGGCAATTGCCAAGTTGGAG AAGGCCACGCTGATGGGCACCTGGGATGGTGAAGTGCGTCAGGCGTCGAA GTACGCAGATAACCTGCAGCAGCTGGATAATGGCAAGAGGATTCCCCCAT CCGGCTGGCAGTGCGAGAAGTGCGACTTGACCAACAACCTCTGGCTTAAT CTGACCGATGGTTCGATCATGTGCGGACGCAAGTTCTTTGACGGCAGTGG CGGCAACGATCACGCCGTGGAGCACTACAGAGTAACGGGTTTCCCGCTGG CGGTGAAACTGGGCACCATCACCGCTGATGGCAAGTCGGATGTGTTCTCC TACCCGGAGGATGAAATGGTACTCGATCCACACTTAGAGCGCCATCTCTC CCACTTTGGCATCAACATGGCGGCGATGAAGAAGAGCGAGAAGTCGATGG TGGAGCTAGAGTTGGACATTAACCAGCGCATCGGCGAGTGGACGGCGCTT ACGGAGAGCGAAAGTGAGCTGCAGCCTGTTGCTGGTCCTGGATACACTGG CATGCGCAATCTGGGCAACTCCTGCTACATAAACAGCGTGATGCAAGTGC TCTTCGTCATCCCAGACTTCCAGCAGCGGTTCGTGGGCACTGGAGCGGAA CGCTATTTCAAAGAGTTTCCCAGCGACCCGGCCAACGACTTCAATATTCA AATGGCCAAGCTGGGAACTGGTCTGCAGTCGGGAAAGTACAGCAGTATTG CCGAGAACACTTTGGACACCGATCACAGCACCGGAATATCGCCGGCCATG TTTAAGAACATTGTGGGCAAGAATCACCCAGATTTCAGCACCAAACAGCA GCAAGATGCCAACGATTTCTATCTGCATTTGCTCACCCTGCTGGACAGGA ATTCGCGGAACCAAACAAATCCCGCAGATGCTCTAAAGTTCCTGCTGGAG GATCGCGTTGAGTGTCTGGCCAGCCACAAGGTGAAGTACAATACCCGCGA GGAATACAGCTTCCGTCTGCCTGTTCCGTTGGACAAGGCCACCAATCTGG ATGAGGTGCGGGAGTTCCAGGAGCGTAAGAAGGCGGCCCGCGAGACCGGA CAACGGCTTCCGGATCGCGACATCGTGAGGCACAAGGTGCCTCTACAGGC ATGCCTGGAAAGGTTTTTCGGCCCGGAGCTGATCGAGCAATTCTACTCCA CTGCCATCGGGTCCAAGACGAATGCCAGGAAAATTACGCGATTGGCCACC ATGCCCGACTGCCTGATGATTCACGTGGGAAAGTTCACGCTGGGCGACGA CTGGGTGCCCAAGAAACTGGACGTTTCCGTAGACATGCCCGATGAACTGG ATCTAAGTAACTGGCGCTCCGCTGGTGGCTTGCAGCCTGGTGAGGAGGCT CTTCCCGAGCCCGCCACAGAGGAGGTGAAGTTTGCATTTGACGAGGCGGT CATGTCCGAGTTGCTGACCATGGGTTTTCCACCGGAAGCCTGCAAGCGTG CTTGCTATCACACCAAAAACAGCGGACTTGAGGCAGCCTCCAACTGGTTG ATGGAGCACATCGCCGACGAGGATATCTCGGAGCCCTTTGTGGTGCCGAA CAACAGCATTGGAGACTGCGCCGCCAACCAGTTTGTGGCCAATCCCGAGA GCCTGGCCATGCTCATGAGCATGGGCTTCGACGAAAGACAGGCGGTGGCT GCTCTGAAAGCGACCGATGGCAATGTGGAGCGCGCCACCGACTGGATCTT CTCGCACGCCGATTCAATTGGTGTTGAGGATGCTGCCCCCGCTGCGAATT CATCAGCTGCAGCGGCCTCCTCGACGCCAAATAAGACCAACTACCGCGAT GGCCGCGGCAAGTATCGCCTGGTGGCATTCATCTCACACATGGGCACCTC CGCCCAGGTGGGACACTACGTTTGTCACATTCGCAAGAAGGGCGAATGGG TGATCTTCAACGATAGCAAGGTGGCCAAGTCGCAGAACCCACCCAAGGAC CTCGGCTATCTGTATCTGTATATGCGCGAACAGTAGCCAGCCCGATCTCA GTCCAATCCGAATCACCCCAGTCCCACAAGCTAATATTATTCGCCCTGAA GAATGGAATTTAATAATAAAGTACATAAACAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3144851..3146917 | 2782..716 | 10095 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 3146977..3147581 | 717..113 | 3010 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 3147695..3147807 | 113..1 | 550 | 99.1 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3145405..3147471 | 2782..716 | 10335 | 100 | Minus |
3L | 28110227 | 3L | 3147531..3148135 | 717..113 | 3025 | 100 | Minus |
3L | 28110227 | 3L | 3148249..3148361 | 113..1 | 565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3145405..3147471 | 2782..716 | 10335 | 100 | Minus |
3L | 28103327 | 3L | 3147531..3148135 | 717..113 | 3025 | 100 | Minus |
3L | 28103327 | 3L | 3148249..3148361 | 113..1 | 565 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3144851..3146916 | 717..2782 | 99 | <- | Minus |
chr3L | 3146978..3147580 | 114..716 | 99 | <- | Minus |
chr3L | 3147695..3147807 | 1..113 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2484 | 203..2686 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2484 | 203..2686 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2484 | 203..2686 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2484 | 203..2686 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2484 | 203..2686 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2779 | 4..2782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2779 | 4..2782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2779 | 4..2782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2779 | 4..2782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12082-RA | 1..2779 | 4..2782 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3145405..3147470 | 717..2782 | 100 | <- | Minus |
3L | 3147532..3148134 | 114..716 | 100 | <- | Minus |
3L | 3148249..3148361 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3145405..3147470 | 717..2782 | 100 | <- | Minus |
3L | 3147532..3148134 | 114..716 | 100 | <- | Minus |
3L | 3148249..3148361 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3145405..3147470 | 717..2782 | 100 | <- | Minus |
3L | 3147532..3148134 | 114..716 | 100 | <- | Minus |
3L | 3148249..3148361 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3145405..3147470 | 717..2782 | 100 | <- | Minus |
arm_3L | 3147532..3148134 | 114..716 | 100 | <- | Minus |
arm_3L | 3148249..3148361 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3145405..3147470 | 717..2782 | 100 | <- | Minus |
3L | 3147532..3148134 | 114..716 | 100 | <- | Minus |
3L | 3148249..3148361 | 1..113 | 100 | Minus |
Translation from 202 to 2685
> RE70722.pep MEELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFL GFGEAYVREYADKTGNRVFLHIQRVKTIKEGADMEAECAESEAGPERKIT RLAIGVEGGYNESDMAKKYEIKDTYSIVVAPHLDKKLPYPDPELPMRVTQ SVEAILAADSAIAKLEKATLMGTWDGEVRQASKYADNLQQLDNGKRIPPS GWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVTGFPLA VKLGTITADGKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKKSEKSMV ELELDINQRIGEWTALTESESELQPVAGPGYTGMRNLGNSCYINSVMQVL FVIPDFQQRFVGTGAERYFKEFPSDPANDFNIQMAKLGTGLQSGKYSSIA ENTLDTDHSTGISPAMFKNIVGKNHPDFSTKQQQDANDFYLHLLTLLDRN SRNQTNPADALKFLLEDRVECLASHKVKYNTREEYSFRLPVPLDKATNLD EVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYST AIGSKTNARKITRLATMPDCLMIHVGKFTLGDDWVPKKLDVSVDMPDELD LSNWRSAGGLQPGEEALPEPATEEVKFAFDEAVMSELLTMGFPPEACKRA CYHTKNSGLEAASNWLMEHIADEDISEPFVVPNNSIGDCAANQFVANPES LAMLMSMGFDERQAVAALKATDGNVERATDWIFSHADSIGVEDAAPAANS SAAAASSTPNKTNYRDGRGKYRLVAFISHMGTSAQVGHYVCHIRKKGEWV IFNDSKVAKSQNPPKDLGYLYLYMREQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10220-PA | 826 | GF10220-PA | 1..826 | 1..827 | 4072 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14479-PA | 828 | GG14479-PA | 1..828 | 1..827 | 4314 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15672-PA | 821 | GH15672-PA | 1..820 | 1..826 | 3651 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Usp5-PC | 827 | CG12082-PC | 1..827 | 1..827 | 4362 | 100 | Plus |
Usp5-PB | 827 | CG12082-PB | 1..827 | 1..827 | 4362 | 100 | Plus |
Usp5-PA | 827 | CG12082-PA | 1..827 | 1..827 | 4362 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12716-PA | 822 | GI12716-PA | 1..822 | 1..827 | 3735 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20751-PA | 532 | GL20751-PA | 3..499 | 232..722 | 2341 | 86.9 | Plus |
Dper\GL10678-PA | 113 | GL10678-PA | 1..110 | 1..108 | 459 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11383-PA | 829 | GA11383-PA | 1..829 | 1..827 | 3903 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14081-PA | 826 | GM14081-PA | 1..826 | 1..827 | 4358 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13355-PA | 826 | GD13355-PA | 1..826 | 1..827 | 4345 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12705-PA | 828 | GJ12705-PA | 1..828 | 1..827 | 3720 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18032-PA | 830 | GK18032-PA | 1..830 | 1..827 | 3829 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21667-PA | 828 | GE21667-PA | 1..828 | 1..827 | 4332 | 96.5 | Plus |
Translation from 202 to 2685
> RE70722.hyp MEELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFL GFGEAYVREYADKTGNRVFLHIQRVKTIKEGADMEAECAESEAGPERKIT RLAIGVEGGYNESDMAKKYEIKDTYSIVVAPHLDKKLPYPDPELPMRVTQ SVEAILAADSAIAKLEKATLMGTWDGEVRQASKYADNLQQLDNGKRIPPS GWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVTGFPLA VKLGTITADGKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKKSEKSMV ELELDINQRIGEWTALTESESELQPVAGPGYTGMRNLGNSCYINSVMQVL FVIPDFQQRFVGTGAERYFKEFPSDPANDFNIQMAKLGTGLQSGKYSSIA ENTLDTDHSTGISPAMFKNIVGKNHPDFSTKQQQDANDFYLHLLTLLDRN SRNQTNPADALKFLLEDRVECLASHKVKYNTREEYSFRLPVPLDKATNLD EVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYST AIGSKTNARKITRLATMPDCLMIHVGKFTLGDDWVPKKLDVSVDMPDELD LSNWRSAGGLQPGEEALPEPATEEVKFAFDEAVMSELLTMGFPPEACKRA CYHTKNSGLEAASNWLMEHIADEDISEPFVVPNNSIGDCAANQFVANPES LAMLMSMGFDERQAVAALKATDGNVERATDWIFSHADSIGVEDAAPAANS SAAAASSTPNKTNYRDGRGKYRLVAFISHMGTSAQVGHYVCHIRKKGEWV IFNDSKVAKSQNPPKDLGYLYLYMREQ*