Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
RE70748.complete Sequence
978 bp (978 high quality bases) assembled on 2002-08-23
GenBank Submission: BT001730
> RE70748.complete
AGTCATCTCTTTGCGGGCTTAACAATGAGGTCGTTTTTGCTGATGATGAT
GCTGTTGCTTGGAACAAGTTGGGCACAACTTGTTTACCGGGACTATAGCT
CACAAATCGGTGGAGGATTTTATAGACCCCAAAGAGGACAATATGGACTG
ATAAGTGATGGAAGGCGGCCAGGAGGTCCATACGAAAGTACTGCTCAAGA
GGGTTTAATCTCTGGAGTGGATACGGGAGGTCCCTTTGGTAATTATGGAA
ACTACGGATCAGTAAATGGAGGACTACTTGCTACCAATCAGCAAGGAGGA
CTTATTTCTGGCGGAAGTAGTGGAGGACCCTTTGCCCAAACTGGCAGCTC
CTTTACCAAAGAAGGACTAATTTCTGATGCCAACAGTGGTGGTCCTTTTA
ACAGCAACCAAGGATTATTTGGTTTGAATAGTGGAAGCGGTCTGCTCAGT
GGAGCTAATACTGGAGGACCATTTGCCAGTGATCATCAAGGAGGTTTAAT
TTCCGGAGGAAATTCTGGAGGCCCTTTTGGAAGTGACCCATGGGCAAATA
GTAATGAAGGGACGTATGAAGGACTTATTTTTGGTGCCAATAGTGGAGGC
CCTTTTGGGAGGAATCAAGGAAGATTTCATGGCGGAGGGCTAACTAGTGG
CAGTAATACTGGAGGTCCATTTGCAAACAGAAATCAACTTGGAGGACTGA
TTGCTGGCGGAAACAGTGGAGGTCCCTTCGAAAGCAAAGAAGCGACAATC
GATCACAGTGAAGGTGGTCTAATCGAAGGAGGTAAGATAGGTGGTCCTCT
GGGCCAAAATCCAGGAGGATTAGTTACTGGAGGCAATAGTGGAGGCCCCT
TTGGACAAGCTGAAAGTAGCTAAAATAAAATAGATTTAATACGTCTCTTA
AGTCATTTAGTTAAATATCACGTCTTTCACTTGTCTGTTATCAATAAAAT
TTCAATAATGCTAAAAAAAAAAAAAAAA
RE70748.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:42:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-RA | 962 | CG30151-RA | 1..962 | 1..962 | 4810 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:50:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 16415289..16416250 | 962..1 | 4495 | 97.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:14:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20528499..20529464 | 966..1 | 4815 | 99.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:15:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 20529698..20530663 | 966..1 | 4815 | 99.8 | Minus |
Blast to na_te.dros performed on 2019-03-16 12:50:27 has no hits.
RE70748.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:51:22 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 16415289..16416250 | 1..962 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:35:04 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..849 | 25..873 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:15:44 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..849 | 25..873 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:00:57 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..849 | 25..873 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:06:41 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..849 | 25..873 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:57:50 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..849 | 25..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:39:29 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..961 | 1..961 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:15:44 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..961 | 1..961 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:00:57 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..962 | 1..962 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:06:41 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..961 | 1..961 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:57:50 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30151-RA | 1..962 | 1..962 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:22 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528503..20529464 | 1..962 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:22 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528503..20529464 | 1..962 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:51:22 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20528503..20529464 | 1..962 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:00:57 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16416008..16416969 | 1..962 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:38:43 Download gff for
RE70748.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20529702..20530663 | 1..962 | 100 | | Minus |
RE70748.hyp Sequence
Translation from 0 to 872
> RE70748.hyp
SHLFAGLTMRSFLLMMMLLLGTSWAQLVYRDYSSQIGGGFYRPQRGQYGL
ISDGRRPGGPYESTAQEGLISGVDTGGPFGNYGNYGSVNGGLLATNQQGG
LISGGSSGGPFAQTGSSFTKEGLISDANSGGPFNSNQGLFGLNSGSGLLS
GANTGGPFASDHQGGLISGGNSGGPFGSDPWANSNEGTYEGLIFGANSGG
PFGRNQGRFHGGGLTSGSNTGGPFANRNQLGGLIAGGNSGGPFESKEATI
DHSEGGLIEGGKIGGPLGQNPGGLVTGGNSGGPFGQAESS*
RE70748.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:15:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 282 | CG30151-PA | 1..282 | 9..290 | 1509 | 100 | Plus |
glo-PA | 586 | CG6946-PA | 239..468 | 54..285 | 208 | 34.2 | Plus |
glo-PB | 586 | CG6946-PB | 239..468 | 54..285 | 208 | 34.2 | Plus |
CG17108-PA | 342 | CG17108-PA | 28..231 | 54..285 | 199 | 35.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 308..533 | 32..285 | 197 | 33.5 | Plus |
CG17108-PA | 342 | CG17108-PA | 48..319 | 31..285 | 185 | 32.3 | Plus |
glo-PA | 586 | CG6946-PA | 292..472 | 38..232 | 157 | 29.9 | Plus |
glo-PB | 586 | CG6946-PB | 292..472 | 38..232 | 157 | 29.9 | Plus |
CG17108-PA | 342 | CG17108-PA | 24..186 | 104..283 | 155 | 35.7 | Plus |
RE70748.pep Sequence
Translation from 24 to 872
> RE70748.pep
MRSFLLMMMLLLGTSWAQLVYRDYSSQIGGGFYRPQRGQYGLISDGRRPG
GPYESTAQEGLISGVDTGGPFGNYGNYGSVNGGLLATNQQGGLISGGSSG
GPFAQTGSSFTKEGLISDANSGGPFNSNQGLFGLNSGSGLLSGANTGGPF
ASDHQGGLISGGNSGGPFGSDPWANSNEGTYEGLIFGANSGGPFGRNQGR
FHGGGLTSGSNTGGPFANRNQLGGLIAGGNSGGPFESKEATIDHSEGGLI
EGGKIGGPLGQNPGGLVTGGNSGGPFGQAESS*
RE70748.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20862-PA | 196 | GG20862-PA | 1..185 | 1..206 | 427 | 57.9 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:11:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH21069-PA | 455 | GH21069-PA | 1..362 | 1..281 | 230 | 33.8 | Plus |
Dgri\GH21069-PA | 455 | GH21069-PA | 194..432 | 58..279 | 210 | 38 | Plus |
Dgri\GH21069-PA | 455 | GH21069-PA | 251..455 | 58..260 | 193 | 39.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30151-PA | 282 | CG30151-PA | 1..282 | 1..282 | 1509 | 100 | Plus |
glo-PA | 586 | CG6946-PA | 239..468 | 46..277 | 208 | 34.2 | Plus |
glo-PB | 586 | CG6946-PB | 239..468 | 46..277 | 208 | 34.2 | Plus |
CG17108-PA | 342 | CG17108-PA | 28..231 | 46..277 | 199 | 35.1 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 308..533 | 24..277 | 197 | 33.5 | Plus |
CG17108-PA | 342 | CG17108-PA | 48..319 | 23..277 | 185 | 32.3 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 308..544 | 24..277 | 183 | 32.2 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 281..485 | 29..279 | 180 | 31.1 | Plus |
Muc91C-PB | 949 | CG7709-PB | 538..768 | 35..282 | 178 | 28.4 | Plus |
Muc91C-PA | 950 | CG7709-PA | 539..769 | 35..282 | 178 | 28.4 | Plus |
HnRNP-K-PB | 413 | CG13425-PB | 88..297 | 72..274 | 170 | 30 | Plus |
HnRNP-K-PE | 493 | CG13425-PE | 171..380 | 72..274 | 170 | 30 | Plus |
HnRNP-K-PF | 496 | CG13425-PF | 171..380 | 72..274 | 170 | 30 | Plus |
HnRNP-K-PA | 496 | CG13425-PA | 171..380 | 72..274 | 170 | 30 | Plus |
HnRNP-K-PC | 502 | CG13425-PC | 177..386 | 72..274 | 170 | 30 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 236..478 | 38..274 | 168 | 31.2 | Plus |
HnRNP-K-PD | 315 | CG13425-PD | 11..202 | 74..274 | 168 | 29.9 | Plus |
Cpr47Ef-PD | 601 | CG13214-PD | 236..466 | 38..277 | 165 | 31.2 | Plus |
HnRNP-K-PB | 413 | CG13425-PB | 102..333 | 33..247 | 164 | 33.5 | Plus |
HnRNP-K-PE | 493 | CG13425-PE | 185..416 | 33..247 | 164 | 33.5 | Plus |
HnRNP-K-PF | 496 | CG13425-PF | 185..416 | 33..247 | 164 | 33.5 | Plus |
HnRNP-K-PA | 496 | CG13425-PA | 185..416 | 33..247 | 164 | 33.5 | Plus |
HnRNP-K-PC | 502 | CG13425-PC | 191..422 | 33..247 | 164 | 33.5 | Plus |
HnRNP-K-PD | 315 | CG13425-PD | 7..238 | 33..247 | 164 | 33.5 | Plus |
Cpr47Ef-PC | 612 | CG13214-PC | 372..585 | 29..271 | 163 | 30.2 | Plus |
glo-PA | 586 | CG6946-PA | 292..472 | 30..224 | 157 | 29.9 | Plus |
glo-PB | 586 | CG6946-PB | 292..472 | 30..224 | 157 | 29.9 | Plus |
CG17108-PA | 342 | CG17108-PA | 24..186 | 96..275 | 155 | 35.7 | Plus |
resilin-PB | 575 | CG15920-PB | 351..573 | 33..276 | 155 | 30.7 | Plus |
resilin-PA | 620 | CG15920-PA | 396..618 | 33..276 | 155 | 30.7 | Plus |
CG14191-PA | 193 | CG14191-PA | 22..172 | 50..209 | 152 | 31.2 | Plus |
Muc91C-PB | 949 | CG7709-PB | 608..836 | 25..240 | 151 | 28.9 | Plus |
Muc91C-PA | 950 | CG7709-PA | 609..837 | 25..240 | 151 | 28.9 | Plus |
CG5787-PB | 950 | CG5787-PB | 271..446 | 66..232 | 151 | 30.6 | Plus |
CG5787-PA | 950 | CG5787-PA | 271..446 | 66..232 | 151 | 30.6 | Plus |
CG34327-PA | 220 | CG34327-PA | 25..217 | 59..273 | 147 | 32 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:11:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24303-PA | 139 | GA24303-PA | 31..135 | 136..238 | 141 | 43.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19787-PA | 242 | GM19787-PA | 1..242 | 1..241 | 593 | 66.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25278-PA | 244 | GD25278-PA | 1..235 | 1..239 | 702 | 79.2 | Plus |
Dsim\GD25278-PA | 244 | GD25278-PA | 40..215 | 137..279 | 154 | 40.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:11:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13800-PA | 324 | GE13800-PA | 1..269 | 1..282 | 658 | 58.2 | Plus |
Dyak\GE13800-PA | 324 | GE13800-PA | 155..320 | 30..196 | 220 | 44.8 | Plus |