BDGP Sequence Production Resources |
Search the DGRC for RE70822
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 708 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7945-RB |
Protein status: | RE70822.pep: gold |
Sequenced Size: | 1288 |
Gene | Date | Evidence |
---|---|---|
CG7945 | 2004-01-09 | Blastp of sequenced clone |
CG7945 | 2008-04-29 | Release 5.5 accounting |
CG7945 | 2008-08-15 | Release 5.9 accounting |
CG7945 | 2008-12-18 | 5.12 accounting |
1288 bp (1288 high quality bases) assembled on 2004-01-09
GenBank Submission: BT011355
> RE70822.complete ACTTTTCTTTTTTGCGGTAGTCAGACACGGTCATACAAATCCCACAATAT AATGTTAAATTAATCATATTTATACTTATCTTCATTTAAGTAAAGCGAAA TATTCGATTGACCCTCGAAGTAAACAACCCAGGTGCTCAAAAATGAAGCT AACAAAGTTAGATTAATCGGTGTCTACGAATTATCTGGAAACACAAGCAT TTCCCGTCATCTAACTCAAACTGCCCAACTCGAAAAATCAACAATATTTT TGCATCGGGCCAAAGGTGCATTAAAACCGGAGCCTCAAGTCTCGGGCGGC AGGTAATTTATTCAAGTTCAAAACAGCCACCCGGGGATTCTCCTAGACAT CGGTTGCCACAAGAAAAGAAGAAGAATTAGGCGTAATCTTCTAGAAAATT GGTGATTTCAGCCGAGAATGTTTGAGAATTTTCGAGGTATTTTTCGGAAA CGGCGTCGCTGCGAGTCGGACACAACACCGCCGCCACCGCCGCCGCAACC CGCCCAGGAGGCGGAGATAATAAACCGATATCCGGAAGATATAGAAGCCG ATACGCCCGAGTCCAATGATGGCTTTGACGCCTCCTGGACCGAAGGCTCT TTTCACAGCCCACATTCAGATAGACCATTTAACGCCAGCGAGAGATTTGT CACCATACTGGATAGTTTGGATGCACGTGTGGAGAAGCTGCGCAAGGATG CACTCAACCTGCAGGAGAAGAAAGACTACCTTCTGATGTCCATGGATCTG ATCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGCTGAACGAGAGGA GATCATTTTGTACCTACAACGGGTGAGCTCTCGCTTGGCCACCGTGGAGC TGCGTGTGCGCACTGTTCGGGACAACTCTCAGGAGGATTCCCTTAGCCAG ATAAATGTATTGATTGACAGCATGATCAAGATGGGTGATCCCGTGATCGG ACGCCAACGATGCCAGTTTTACTTAAACGCCTGCTGCAGCAGCTCAATGG ATCCATCCGGACACATGGACACCGTGCCCGAGGCCGATGTTGGGCCGGTC GACAAGAAGTTCGAGAGCGTTTTGCTTGGCTGCACTCTGGACGATCAGAA GAACATCAAGAAGCGGCTCCAGGCCTTAATGGCTTATCTGAATAAGCAAA CTGTTAGCCATTAATTAAATTGTTTTTTGGTCTATTAACTATTCATAGCA TTATTATCAAACCAAACGAAATACATCACCAAGCTAGATGAAACGAATAA TAAAGAAAGCAGCATATACACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7945.b | 1363 | CG7945.b | 1..1273 | 1..1273 | 6350 | 99.9 | Plus |
CG7945-RB | 1276 | CG7945-RB | 1..1251 | 23..1273 | 6255 | 100 | Plus |
CG7945-RC | 3575 | CG7945-RC | 1609..2239 | 643..1273 | 3155 | 100 | Plus |
CG7945-RC | 3575 | CG7945-RC | 1..601 | 23..623 | 3005 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15513450..15514072 | 623..1 | 3100 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 15511649..15512135 | 1272..786 | 2435 | 100 | Minus |
chr3L | 24539361 | chr3L | 15512298..15512442 | 787..643 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15523512..15524134 | 623..1 | 3100 | 99.8 | Minus |
3L | 28110227 | 3L | 15521710..15522197 | 1273..786 | 2440 | 100 | Minus |
3L | 28110227 | 3L | 15522360..15522504 | 787..643 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15516612..15517234 | 623..1 | 3100 | 99.8 | Minus |
3L | 28103327 | 3L | 15514810..15515297 | 1273..786 | 2440 | 100 | Minus |
3L | 28103327 | 3L | 15515460..15515604 | 787..643 | 725 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15511649..15512133 | 788..1272 | 100 | <- | Minus |
chr3L | 15512298..15512440 | 645..787 | 100 | <- | Minus |
chr3L | 15512498..15512518 | 624..644 | 100 | <- | Minus |
chr3L | 15513450..15514072 | 1..623 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..747 | 418..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..747 | 418..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..747 | 418..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..747 | 418..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..747 | 418..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..1237 | 36..1272 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..1237 | 36..1272 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 4..1275 | 1..1272 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 1..1237 | 36..1272 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RB | 4..1275 | 1..1272 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15522360..15522502 | 645..787 | 100 | <- | Minus |
3L | 15522560..15522580 | 624..644 | 100 | <- | Minus |
3L | 15521711..15522195 | 788..1272 | 100 | <- | Minus |
3L | 15523512..15524134 | 1..623 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15522360..15522502 | 645..787 | 100 | <- | Minus |
3L | 15522560..15522580 | 624..644 | 100 | <- | Minus |
3L | 15521711..15522195 | 788..1272 | 100 | <- | Minus |
3L | 15523512..15524134 | 1..623 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15522360..15522502 | 645..787 | 100 | <- | Minus |
3L | 15522560..15522580 | 624..644 | 100 | <- | Minus |
3L | 15521711..15522195 | 788..1272 | 100 | <- | Minus |
3L | 15523512..15524134 | 1..623 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15514811..15515295 | 788..1272 | 100 | <- | Minus |
arm_3L | 15515460..15515602 | 645..787 | 100 | <- | Minus |
arm_3L | 15515660..15515680 | 624..644 | 100 | <- | Minus |
arm_3L | 15516612..15517234 | 1..623 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15514811..15515295 | 788..1272 | 100 | <- | Minus |
3L | 15515460..15515602 | 645..787 | 100 | <- | Minus |
3L | 15515660..15515680 | 624..644 | 100 | <- | Minus |
3L | 15516612..15517234 | 1..623 | 99 | Minus |
Translation from 417 to 1163
> RE70822.pep MFENFRGIFRKRRRCESDTTPPPPPPQPAQEAEIINRYPEDIEADTPESN DGFDASWTEGSFHSPHSDRPFNASERFVTILDSLDARVEKLRKDALNLQE KKDYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRVSSRLATVELRVRTV RDNSQEDSLSQINVLIDSMIKMGDPVIGRQRCQFYLNACCSSSMDPSGHM DTVPEADVGPVDKKFESVLLGCTLDDQKNIKKRLQALMAYLNKQTVSH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10728-PA | 353 | GF10728-PA | 173..353 | 68..248 | 879 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13543-PA | 344 | GG13543-PA | 164..344 | 68..248 | 910 | 94.5 | Plus |
Dere\GG13543-PA | 344 | GG13543-PA | 1..66 | 1..69 | 237 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16818-PA | 367 | GH16818-PA | 187..367 | 68..248 | 831 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7945-PB | 248 | CG7945-PB | 1..248 | 1..248 | 1285 | 100 | Plus |
CG7945-PA | 262 | CG7945-PA | 82..262 | 68..248 | 910 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12223-PA | 259 | GI12223-PA | 47..258 | 38..247 | 841 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25595-PA | 331 | GL25595-PA | 151..331 | 68..248 | 820 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20709-PA | 331 | GA20709-PA | 151..331 | 68..248 | 820 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24486-PA | 361 | GM24486-PA | 181..361 | 68..248 | 911 | 95.6 | Plus |
Dsec\GM24486-PA | 361 | GM24486-PA | 1..67 | 1..69 | 245 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12558-PA | 246 | GD12558-PA | 1..246 | 1..248 | 1156 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11453-PA | 332 | GJ11453-PA | 152..332 | 68..248 | 830 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10518-PA | 269 | GK10518-PA | 89..269 | 68..248 | 839 | 85.6 | Plus |
Dwil\GK18090-PA | 215 | GK18090-PA | 10..214 | 36..247 | 685 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22844-PA | 262 | GE22844-PA | 82..262 | 68..248 | 911 | 93.9 | Plus |
Dyak\GE19846-PA | 262 | GE19846-PA | 82..262 | 68..248 | 911 | 93.9 | Plus |
Dyak\GE19845-PA | 69 | GE19845-PA | 1..69 | 1..69 | 231 | 75.7 | Plus |
Dyak\GE22843-PA | 71 | GE22843-PA | 1..71 | 1..69 | 221 | 74.6 | Plus |
Translation from 417 to 1163
> RE70822.hyp MFENFRGIFRKRRRCESDTTPPPPPPQPAQEAEIINRYPEDIEADTPESN DGFDASWTEGSFHSPHSDRPFNASERFVTILDSLDARVEKLRKDALNLQE KKDYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRVSSRLATVELRVRTV RDNSQEDSLSQINVLIDSMIKMGDPVIGRQRCQFYLNACCSSSMDPSGHM DTVPEADVGPVDKKFESVLLGCTLDDQKNIKKRLQALMAYLNKQTVSH*