RE70844.complete Sequence
2119 bp (2119 high quality bases) assembled on 2004-01-09
GenBank Submission: BT011356
> RE70844.complete
TGCGACTAAGCTCTGTCATTAAATATCGATTTGTTGGCCATGCTCCGCCA
TTTAATAGCTCCAACTTAAAGTCAAAGATTTCATCTGAGCTCGGAGAACT
CCACATTGATTACTGACTTACAGAAATGCGGCGGAGCATATTGTTCAAGT
TGTATTTACTGCACTTGAATTGGATGCCTTTCCAATAGCTTTTTGTAGCA
CACTTTTCCGCAGTTTTATTAGTGCGAAATTTATGAGGGCACTGAAAACG
AAAATTGCCAACGAATTTCATTCATTTGTCATGCCCTTTTATGGCCAACC
GATGAAATGTTCGAGAACAGTAACAGCCATAAACAATTTCCAGCGTTTTT
CAGCTGTTTACAAACAGCAAAGAAATGGTTTGTGGGCTAAAATGATTTTG
TTGTTTGCCTCGTTTGAATTGAGCCATTTTACCGGCTGTGATTTGGCTAA
AAGTTCAATGTACATAAATGTGAATAGTGTGGATGGGGCTAATTTCCGAT
TTGCACTCACTTCCTCTCGCGGGAAATGCAATCATAATCTCGACTAAATT
ATTCAGGGCTCCTCGAATGTTTACCAAATTCGTGAATATGGCCCATGAAC
GCATTTCGGCGGAGTTGGGGCACTCACTTTGCTGCTTATCAGCGGCAATT
TTAATTGTTTTATTTTAACATTTAAAACCAATTTATATTTATGAAATTTC
GTAAATTGGCAATGTCATAAAACGCACACACTCACGCAGACTTCCAGGCA
CTTGTGCCCTCAGGTCGTATTCGCAACATTTCCCATTTAGCGTGACATGC
TTTCCCTTCTCCATTTCCCATTTTCCGCTCACCCATTCCAAAAGCCCCGG
CATTTCGCATTTCGCATTTCCCAGTTGCCAGTTGTGGCCCGCTGCCCTGT
TATGTGGTAATTAAAATGACTCTTGGCCCATCTCCGACGCGTTTTTGGAC
AGCTTTTTACTGCCACTCAGCCGATGCGTCGTATATGCGTAATGTCTGGC
TAAATTATTAATTTACTATGGCCCCGAACGAGTGTTGTTAATTAATTTGT
ATGCAAATGCCGGAAAATCGAGACTGGGTGGTGCTTGAGCCGGAACGAGT
GGCTGATCCGCTTCAATGAATCGCTTCAAATGCTGACCAGCAAATCCCAT
TACCATTGAGTGGATGACGATGGTTGTGGTTTATTAATTGATACGAAATA
ATTATGGTTAGGTAGGTGAGAAGTTGGTCTGAAATGATCTGCGGATGGTT
TTTATCTATTTGTTTGTCTCGCGACTTCATTGTGGACGGCAGTCCACTTA
GTGACGAAGGGCACCAGTTAAATGTCTCTGCTGGTGACTCACGTTTTCAT
CTCTTGTAGGTTTATTACAATCCCAAACCTTCGAAGCTAATATTTTCAAC
ATCCTGAATGCAAGGTGCACACTAAGCTGTACTGCGGTTAGTCTGTACGC
TTTTACCTTTGCTGGATTGTTTGCACTGCGGCAACGGGGCGTGTGATTAA
TTTTAGCCGGAATAGCCGACAAAAACCCTTTCATTCATTCCGCTCCTTTG
TCACAATAAAATTGGGGAGAAGGGTAGGGCAAACAAGAGCATATAATAAA
AACAGTAAACATTTAATTGCCTGACAAATATTTGCCCTTCGCCCCAGCAC
CAAAAAAGGGGTTTAGGGCCAAGTTTCGAGAGCTCGACAAATAGGCGCTG
ATGAAAAACTTTAATAGTAAAACTTCCCCATTCGGCTTATGCTTTCATTT
CTCCTTCTTCTTCTCCCATTTCTCCGCCTTTTCCCCCCAACTTTTCTCTT
ATGCATTATCGGCATACGCTGCTCATATAACTTTGCTCGTCGGCTGCCGT
TGAAAGTTTTGCGCAGCTTGACAAAATTTTCAGAGCTATGCGATGGTCGC
TATATATGCAAAAATCTTAAGCGAAGTATCGATTTTGCCGCCGGCTAAAA
ATTATTTACAAACGAATGAACTTTTAAAGGAGCCAACTCCAATTGAGTGG
GTTGTCTGCGGTTCAGTTTTGTTTGTCTGCCAGCTCGAGAGTCCTTTGCC
AATGCCCGGAAGCCCTACTACAAAGGACATCGCATGGCGGGTGAATTCTC
CCTAAAAAAAAAAAAAAAA
RE70844.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 18:09:36 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:29:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr2R | 21145070 | chr2R | 10529795..10531897 | 1..2103 | 10470 | 99.9 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:14:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:29:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14642492..14644610 | 1..2119 | 10520 | 99.8 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25260384 | 2R | 14643691..14645809 | 1..2119 | 10520 | 99.7 | Plus |
Blast to na_te.dros performed on 2019-03-15 14:29:44 has no hits.
RE70844.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:30:31 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr2R | 10529795..10531897 | 1..2103 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 17:31:20 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:30:31 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14642492..14644594 | 1..2103 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:30:31 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14642492..14644594 | 1..2103 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:30:31 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14642492..14644594 | 1..2103 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:31:16 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10529997..10532099 | 1..2103 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:31:16 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10529997..10532099 | 1..2103 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:31:16 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10529997..10532099 | 1..2103 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:03:52 Download gff for
RE70844.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14643691..14645793 | 1..2103 | 99 | | Plus |
RE70844.pep Sequence
Translation from 232 to 546
> RE70844.pep
MRALKTKIANEFHSFVMPFYGQPMKCSRTVTAINNFQRFSAVYKQQRNGL
WAKMILLFASFELSHFTGCDLAKSSMYINVNSVDGANFRFALTSSRGKCN
HNLD*
RE70844.pep Blast Records
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:25:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM21562-PA | 104 | GM21562-PA | 1..104 | 1..104 | 523 | 94.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:25:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD11067-PA | 102 | GD11067-PA | 1..102 | 1..104 | 505 | 93.3 | Plus |
RE70844.hyp Sequence
Translation from 232 to 546
> RE70844.hyp
MRALKTKIANEFHSFVMPFYGQPMKCSRTVTAINNFQRFSAVYKQQRNGL
WAKMILLFASFELSHFTGCDLAKSSMYINVNSVDGANFRFALTSSRGKCN
HNLD*
Sequence RE70844.hyp has no blast hits.
