BDGP Sequence Production Resources |
Search the DGRC for RE70955
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 709 |
Well: | 55 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9925-RA |
Protein status: | RE70955.pep: gold |
Preliminary Size: | 2934 |
Sequenced Size: | 3201 |
Gene | Date | Evidence |
---|---|---|
CG9925 | 2001-12-17 | Blastp of sequenced clone |
CG9925 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9925 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9925 | 2008-04-29 | Release 5.5 accounting |
CG9925 | 2008-08-15 | Release 5.9 accounting |
CG9925 | 2008-12-18 | 5.12 accounting |
3201 bp (3201 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071649
> RE70955.complete CTCTTTCTTCCCACGTTCGTTCAATGCACTGAAGCGCGTGCCCAGCGAGC TTCGAATTTAAACGCGTTTAGTGAACGTATCGCATGTTTGTGAGTTGTGA ATCGCGCACTTAAATTCTAAAGGATTCCACCTTTTTCAAAACGAAAACAT AGAAAGTTCTCGTCCAGCGTAAATAGATTTTCACTTTGTATTTCATCGCG TGCTAAAAGTTCTGTTAGCGCCATTTTGCTGCGTTTCCTTTAACGCGCCG TTCTTTCATTCACACGTTCTTGCGTTGTTACTTTGAATTGAAGAAATGGA AAAGTCGGAGGAAAAGACATGCGTCGTCTGTGGCACTCCGACCAGATTGA TGTGCCAGCGGTGTGGAGAACCGTACTGCAATGAAAAGTGCCAGAAATTG GATTGGCAGAGGCACAGGCAGGTGTGCATCATTATGCCACCCTTGGTGGA GTGCCGGCCTCTTCAACCGGCGTTGAATCCAATCCAGAGCGTAGAGAACC AAGTTGCTCTGGCTAAAACTCGCACTAAATCGCCAATCCCATGTGTGGAG CCCACAGTTGCTGTGCCGAACAAGCCGGATCTATCGGAAAACTGGCGCAA ACATTTGCTGCCGTCGGGCATGGAGTTTTTCAAGTGCCGCGTGACTTTCA TGGAGAACGATGGACCCATTTGGGTGGTGCACGTGGCGAATGTGGAGGCC ATTGAGCGAATGACGGTCAACATGCAGCGCTGCATGCAGAATAAGAAGAT GATTCGTATGGAAGGAGTGCGGGAGGACACCCTCGTGGCCATCAGTGTGG GCGACAAGGTCCATCGCGGTCATGTTTTGACGGTTTGCCAAAAGAAGCAA GAAGCCAATGTCCGTATGATTGACCACGGTCAGATAGTAGCTACACCGTT TCGGGATATCTACACCATTGTGCCCAAGATGGCCGAAAGCAAGGCGTTCG CTTTCCGTGTTCAATTGCCCACGAACACTGGAGTTCAGGACATTAAGAAC TTGACGCTCCGTATGTTGGGAACCAAAACCAGCGACGGAGCTTATCACGT CCATCTAAAGCCCAAGATGATAATACCACTAAGTTTGCCCTTGGAGATGC TGCAGCTTAATCCAGAAGTCAAAGTCATCCGGGTCTTTAAGGCAAATCCA AAGCATAACGAACCGCAGCTGGCCCTACTCCAGATCAACGTGATGGGCCA TGTCAACGCAGACTTAAACAACCGCATAGCCGAGAAGCCAAGACAGCCAT TCACGCTGCCCTTCCCCGAGCAGAAATCCATCTTCTTTGCGGCCACCCGC ACTAAAAATGGTTATCGGCGAGCTTTCCTATTGGATCATATCATGAAACC GAGGCCAACCTATTTGGTTTACGAAATGGACGAGGGTAGAGTGTCCATAG CCACCGATCTGAGTCGTATTCCCAGCGAACTACTTGGCCTGCCCAGTCGA GTGTTTGCCGCTCAGCTGGAGGACTCCGTACCCGAGGAGCTTGAGACTCA AGGTGCAGAACTCACGGTCAAGTTTAAGCTGGATAATAAGCCGCCCAAGG AAAAGTTACGCGCGGCGAATGCCGCCTTGAATTCCAAGGGCGAGCAGATA TGTATGGCCCGTCTGATCACTTTCTTGGGTCAGATTTCATATTTAGGCCA CAAGTACTGGCGTGAACCCATCGTCCATGATTCCATCGTATTCATTTCCC ACTTGGTCAGCTTTAAGGAGGTATACATCAGCACTCCAGACGCCAAGCAG TATGCGGAAATTTTCAAGCGCCTGGAGTACAAGTGCGCTACCATTACCAA ATCTAGTGATGTTTCCGTTGGCAGCATCGTGCTCGTTGTCTCCAAGCAGA TGGGTCACTTCCGGGGCGAGATATTGAGTAAGGATAGTGGATTGTTCGAA GTAATGAACGTTGATACTGGTGCCACCCAAAAGGTGGAGTTGGCGGAAAT ACGCAGCTCCTGTCGCTTCCTGGAGAATTTGCCCGTATGTCTGATGCGTG TACAGTTGCAGAATGTCTGCAATATTCCGGATGCAGCTGTGCCAGTTAAC AATGCGGCCATTCAAATGCTGCACAAGCTCTGCGCCCAAAAAGAACTGCT AAAATTGAACATGGTAGATGCAACTACATCGACCGTGGACCTGCTGTTCA GCTCCGGCGATTCGCGCTCCTTGACGACCCAAATGTTGCCTCTTATATTT ACACCGGTACAGGAAAAAGCAGAAGTTGCACCACCGAAGGCTGCTTCTAC TCCGAGTCAATTGCCTGTTGTAACTCACAAACAGCAGAAGGTGTCTCCAC AGTCTCTACTTCTGCTGGATCTGCCTCCACTGCCGCCCTCTCCACCGGAG TCGCCTTTTCCTGCCGACGTGACAAGTACAAAGTCAGCTTCCCACGTTCT GCCCATTAAACGCTTCCTTTTCGACGCTTTGCCCAAGAATCTAGCTCCTT TAGGCGACAAGGTCAACCTAATCCTTATGAACGCTGACGGATTGCCGCAA ACTGGCTACATCACCGCCGCCTACTTCAAGGACGAAAAGGCGGCCAAGGA ATTTGAAAAAATCCTTAGCTTGACATCAAGTCAGGGAGCATGTGACCACA ATGTTGTTCCGGGTTACGTACCAAACGTTGGTGAACTGTGCCTGGCGATC TACAGCGAAGATAAGAACTGGTATCGCGGAGTCTGCCAGGAGGTTAAGGA CAATATGGTCAAAATTCTATTCTGCGATTTTGGAAATACGGAATATGTGG CCGTGAGACACGTGAAACCGATTTCACAGGATTTGCTAATTGCCGTCAAT GTCACAAAGTGCTATATAAATGGCTTCGACAAATCAAAGAATTTTGCGGC TCTGGAGCAGTTTCTTGTGCGTAAGATTCGATTCTTATGCGGAGTTAAGA AAGGCCCTGAACCCGATACTCGTCTCATTACAATTCCGGATATGGAGACT ATTCTAAACACACCAGTTGCATAATTTAACTTAAGAACTCGCATTCCTTC ATATGACTTTAGCATTAAGTGTACACCAAAAGTGTATGTTCAAACATTAT TTCGATATTCGATATAAGTTTCGACCACAGTGTATTTTCGAACATGATTT TGACAATTATTCGCTTACATTTATTCCAGCACAGAGTGATTCGACTAAGA GACTTGACACCATATAAAGATGTTGATCGTTCATACAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9925-RA | 3450 | CG9925-RA | 191..3377 | 1..3187 | 15935 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9787126..9788557 | 1870..439 | 7160 | 100 | Minus |
chr3R | 27901430 | chr3R | 9786306..9787062 | 2625..1869 | 3785 | 100 | Minus |
chr3R | 27901430 | chr3R | 9788642..9789079 | 438..1 | 2190 | 100 | Minus |
chr3R | 27901430 | chr3R | 9785624..9785988 | 3186..2822 | 1825 | 100 | Minus |
chr3R | 27901430 | chr3R | 9786048..9786245 | 2823..2626 | 990 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13962216..13963647 | 1870..439 | 7160 | 100 | Minus |
3R | 32079331 | 3R | 13961396..13962152 | 2625..1869 | 3785 | 100 | Minus |
3R | 32079331 | 3R | 13963732..13964169 | 438..1 | 2190 | 100 | Minus |
3R | 32079331 | 3R | 13960713..13961078 | 3187..2822 | 1830 | 100 | Minus |
3R | 32079331 | 3R | 13961138..13961335 | 2823..2626 | 990 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13703047..13704478 | 1870..439 | 7160 | 100 | Minus |
3R | 31820162 | 3R | 13702227..13702983 | 2625..1869 | 3785 | 100 | Minus |
3R | 31820162 | 3R | 13704563..13705000 | 438..1 | 2190 | 100 | Minus |
3R | 31820162 | 3R | 13701544..13701909 | 3187..2822 | 1830 | 100 | Minus |
3R | 31820162 | 3R | 13701969..13702166 | 2823..2626 | 990 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9785624..9785987 | 2823..3186 | 100 | <- | Minus |
chr3R | 9786049..9786245 | 2626..2822 | 100 | <- | Minus |
chr3R | 9786306..9787060 | 1871..2625 | 100 | <- | Minus |
chr3R | 9787126..9788557 | 439..1870 | 100 | <- | Minus |
chr3R | 9788642..9789079 | 1..438 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..2679 | 296..2974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..2679 | 296..2974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..2679 | 296..2974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..2679 | 296..2974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..2679 | 296..2974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..3186 | 1..3186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..3186 | 1..3186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..3186 | 1..3186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 1..3186 | 1..3186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9925-RA | 6..3191 | 1..3186 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13960714..13961077 | 2823..3186 | 100 | <- | Minus |
3R | 13961139..13961335 | 2626..2822 | 100 | <- | Minus |
3R | 13961396..13962150 | 1871..2625 | 100 | <- | Minus |
3R | 13962216..13963647 | 439..1870 | 100 | <- | Minus |
3R | 13963732..13964169 | 1..438 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13960714..13961077 | 2823..3186 | 100 | <- | Minus |
3R | 13961139..13961335 | 2626..2822 | 100 | <- | Minus |
3R | 13961396..13962150 | 1871..2625 | 100 | <- | Minus |
3R | 13962216..13963647 | 439..1870 | 100 | <- | Minus |
3R | 13963732..13964169 | 1..438 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13960714..13961077 | 2823..3186 | 100 | <- | Minus |
3R | 13961139..13961335 | 2626..2822 | 100 | <- | Minus |
3R | 13961396..13962150 | 1871..2625 | 100 | <- | Minus |
3R | 13962216..13963647 | 439..1870 | 100 | <- | Minus |
3R | 13963732..13964169 | 1..438 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9786436..9786799 | 2823..3186 | 100 | <- | Minus |
arm_3R | 9786861..9787057 | 2626..2822 | 100 | <- | Minus |
arm_3R | 9787118..9787872 | 1871..2625 | 100 | <- | Minus |
arm_3R | 9787938..9789369 | 439..1870 | 100 | <- | Minus |
arm_3R | 9789454..9789891 | 1..438 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13701545..13701908 | 2823..3186 | 100 | <- | Minus |
3R | 13701970..13702166 | 2626..2822 | 100 | <- | Minus |
3R | 13702227..13702981 | 1871..2625 | 100 | <- | Minus |
3R | 13703047..13704478 | 439..1870 | 100 | <- | Minus |
3R | 13704563..13705000 | 1..438 | 100 | Minus |
Translation from 295 to 2973
> RE70955.pep MEKSEEKTCVVCGTPTRLMCQRCGEPYCNEKCQKLDWQRHRQVCIIMPPL VECRPLQPALNPIQSVENQVALAKTRTKSPIPCVEPTVAVPNKPDLSENW RKHLLPSGMEFFKCRVTFMENDGPIWVVHVANVEAIERMTVNMQRCMQNK KMIRMEGVREDTLVAISVGDKVHRGHVLTVCQKKQEANVRMIDHGQIVAT PFRDIYTIVPKMAESKAFAFRVQLPTNTGVQDIKNLTLRMLGTKTSDGAY HVHLKPKMIIPLSLPLEMLQLNPEVKVIRVFKANPKHNEPQLALLQINVM GHVNADLNNRIAEKPRQPFTLPFPEQKSIFFAATRTKNGYRRAFLLDHIM KPRPTYLVYEMDEGRVSIATDLSRIPSELLGLPSRVFAAQLEDSVPEELE TQGAELTVKFKLDNKPPKEKLRAANAALNSKGEQICMARLITFLGQISYL GHKYWREPIVHDSIVFISHLVSFKEVYISTPDAKQYAEIFKRLEYKCATI TKSSDVSVGSIVLVVSKQMGHFRGEILSKDSGLFEVMNVDTGATQKVELA EIRSSCRFLENLPVCLMRVQLQNVCNIPDAAVPVNNAAIQMLHKLCAQKE LLKLNMVDATTSTVDLLFSSGDSRSLTTQMLPLIFTPVQEKAEVAPPKAA STPSQLPVVTHKQQKVSPQSLLLLDLPPLPPSPPESPFPADVTSTKSASH VLPIKRFLFDALPKNLAPLGDKVNLILMNADGLPQTGYITAAYFKDEKAA KEFEKILSLTSSQGACDHNVVPGYVPNVGELCLAIYSEDKNWYRGVCQEV KDNMVKILFCDFGNTEYVAVRHVKPISQDLLIAVNVTKCYINGFDKSKNF AALEQFLVRKIRFLCGVKKGPEPDTRLITIPDMETILNTPVA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18797-PA | 882 | GF18797-PA | 1..877 | 19..887 | 2029 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21599-PA | 902 | GG21599-PA | 1..900 | 1..890 | 3528 | 74.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17400-PA | 838 | GH17400-PA | 1..837 | 47..891 | 1556 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9925-PA | 892 | CG9925-PA | 1..892 | 1..892 | 4634 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22729-PA | 907 | GI22729-PA | 10..903 | 9..888 | 1797 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23320-PA | 869 | GL23320-PA | 39..865 | 62..888 | 1742 | 42.8 | Plus |
Dper\GL23354-PA | 663 | GL23354-PA | 19..67 | 3..51 | 158 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22128-PA | 918 | GA22128-PA | 10..914 | 9..888 | 1842 | 42 | Plus |
Dpse\GA21963-PA | 662 | GA21963-PA | 19..67 | 3..51 | 158 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25895-PA | 896 | GM25895-PA | 1..896 | 1..892 | 3920 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20465-PA | 896 | GD20465-PA | 1..896 | 1..892 | 3896 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24667-PA | 889 | GJ24667-PA | 9..885 | 8..888 | 1980 | 46.5 | Plus |
Dvir\GJ24407-PA | 587 | GJ24407-PA | 15..102 | 9..98 | 169 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22481-PA | 841 | GK22481-PA | 1..837 | 19..888 | 1740 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24570-PA | 904 | GE24570-PA | 1..902 | 1..890 | 3445 | 73.2 | Plus |
Translation from 295 to 2973
> RE70955.hyp MEKSEEKTCVVCGTPTRLMCQRCGEPYCNEKCQKLDWQRHRQVCIIMPPL VECRPLQPALNPIQSVENQVALAKTRTKSPIPCVEPTVAVPNKPDLSENW RKHLLPSGMEFFKCRVTFMENDGPIWVVHVANVEAIERMTVNMQRCMQNK KMIRMEGVREDTLVAISVGDKVHRGHVLTVCQKKQEANVRMIDHGQIVAT PFRDIYTIVPKMAESKAFAFRVQLPTNTGVQDIKNLTLRMLGTKTSDGAY HVHLKPKMIIPLSLPLEMLQLNPEVKVIRVFKANPKHNEPQLALLQINVM GHVNADLNNRIAEKPRQPFTLPFPEQKSIFFAATRTKNGYRRAFLLDHIM KPRPTYLVYEMDEGRVSIATDLSRIPSELLGLPSRVFAAQLEDSVPEELE TQGAELTVKFKLDNKPPKEKLRAANAALNSKGEQICMARLITFLGQISYL GHKYWREPIVHDSIVFISHLVSFKEVYISTPDAKQYAEIFKRLEYKCATI TKSSDVSVGSIVLVVSKQMGHFRGEILSKDSGLFEVMNVDTGATQKVELA EIRSSCRFLENLPVCLMRVQLQNVCNIPDAAVPVNNAAIQMLHKLCAQKE LLKLNMVDATTSTVDLLFSSGDSRSLTTQMLPLIFTPVQEKAEVAPPKAA STPSQLPVVTHKQQKVSPQSLLLLDLPPLPPSPPESPFPADVTSTKSASH VLPIKRFLFDALPKNLAPLGDKVNLILMNADGLPQTGYITAAYFKDEKAA KEFEKILSLTSSQGACDHNVVPGYVPNVGELCLAIYSEDKNWYRGVCQEV KDNMVKILFCDFGNTEYVAVRHVKPISQDLLIAVNVTKCYINGFDKSKNF AALEQFLVRKIRFLCGVKKGPEPDTRLITIPDMETILNTPVA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9925-PA | 892 | CG9925-PA | 1..892 | 1..892 | 4634 | 100 | Plus |