BDGP Sequence Production Resources |
Search the DGRC for RE71014
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 710 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7781-RA |
Protein status: | RE71014.pep: gold |
Sequenced Size: | 1844 |
Gene | Date | Evidence |
---|---|---|
CG7781 | 2001-12-13 | Blastp of sequenced clone |
CG7781 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7781 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7781 | 2008-04-29 | Release 5.5 accounting |
CG7781 | 2008-08-15 | Release 5.9 accounting |
CG7781 | 2008-12-18 | 5.12 accounting |
1844 bp (1844 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070606
> RE71014.complete CAGTCGTTTGCCGTTTGTCAACCGTTAGCCAGCGTTTGCCGTGAGCGCTA GTTTCTTGCAAGGAATTTATATATATAAAGATAACTACTATATATATAAA TAAAGTGGAAGCAGTCCATGTTCAGTGATAGCAACTGAATCGGAATCCGC AAAATCGGTGTTTCTAAAGTCGCCAGAAACCCAAATAGTTCAACTAATAT TTAGTGTTCAGCTAAAAAGTGTTTCAAGCATATTTCGAAAAAAATGCAGT ACATCTATGTGATTAGTGCGCTGATTTTGGCCATCGCCGTGCAGCAAGGA TATGCCATCAAGTGCTTTGTCTGCAACAGCCACAAAGACGCCAACTGTGC GCTGGACATACCGCCGGACAATCTGCTGAAGGACTGCGATGAGCAGTACT CGTCCCGTGGCAAGGGAATACCCACATACTGCCGCAAGATTACGCAGATC ATCGAGTTCTCGGTGAACAGCCTGCCCCCGGATAGCCGTGTGATTAGGAC CTGTGCCTATCAGAATCAGACCTCCACCAACTATTGCTATCAGCGTGCCG GTTTTGGTGGTCGGCAGGTGGTCTGCTCCTGCGATACGGATAACTGCAAC GGAGCCGGAGCGATGGGCGCATCGGCGTTGGGCGTGGCAGCCATGGTGGG CCTCCTGCTGAGCGCCCGTCAGTATCTGCAGCGTTAAGGACGAAAATATC GAGGGTGTCCCTCAGTTGTTTTTGTTTGTTTTATCGATGCATCCACCCAG TTTTTCTTTCGTATTGCTGCTGCTGACTCTTTGACTTCTGTGACACTTTC ACCGCTTTCTCCCGCCCCCCTTCACATCATTAACAAGGTCCACTCGCAGA GCTGCTCCAGAGTCAGCTCTGGCCCAGCCTGATTTTGTAACATTTTTTGA ATGGAGAACCGTAAAAGCTTTATACAAAGTATTAAATAATAACATAACTC CCTAACTAGAAGTGTATATAAAAAAACCAAAGAGAGCATGTAAACAATTG GCCAATATAATCGTTCAAATCTTTTTACATTAACAGGCATTTTGCAAACT AACGTATTAAACGAAATCAAGGAAAATAACGATTAAATAAAACTAAAACC TACCGCAGTTGAAAGTATTAAACAAATCGAAAATAACGAATAAGTCAAAG ATGGCCACAAAAGCTAACGATGTTAAAAATTAAGGCTACCCACAAAATAA AAGTAGTACATAGTAAATGTTAACACTCTTCGCCTTAGTTTGTCTATTTT TATTTAACACAAGACTCGAACTAAATTTCGGCAATAGCTAACATTAAAAA ATTAAACAATTTTAACGTAATGCTCAACGAGGCGAACACTTCATAGAATA ATTAGCAAGCAATTGGGTCGAAGGTCGTCCCTGGATAATCCAAAATGATA GTTGTGACACGCTTAGGGGCGACGACCACGCCCAGCCCACATCTCCGCAC TCCCAAGGGGAAAAACACTCGTTGTTGTAACCAACTGCCAAAAAGGATAA CTTTGAAGTCGTTTCATCTACCGCATAGGCACCACCATCCCAGCAATGAG AAAATGAATATACCAAACTATTGGGATAACCAGTAGGGTAATGAAACCTA ATGAAACCTTTTTGTCCAAAGTAGCAAATAATTGCAGATTGCAGAATCAA AGAAATACATTAAAACGTTACACAAACCGAAGCAACAAATACATTGTTTT TAGTTCTTTTAGCAAAATAACAGTTTATAGTAAAAAATTTTTTAGTTAAG AATCTCCTCTTAAATGCAATATTTGTAATGCAATAAAATTGTAAAATGTT TAAAGTGAAAAACAATAAATATGAATACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8320208..8321173 | 1828..863 | 4755 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 8321235..8321628 | 866..473 | 1970 | 100 | Minus |
chr2L | 23010047 | chr2L | 8323871..8324169 | 299..1 | 1495 | 100 | Minus |
chr2L | 23010047 | chr2L | 8321700..8321875 | 472..297 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8321276..8322245 | 1832..863 | 4835 | 99.9 | Minus |
2L | 23513712 | 2L | 8322309..8322702 | 866..473 | 1970 | 100 | Minus |
2L | 23513712 | 2L | 8324958..8325256 | 299..1 | 1495 | 100 | Minus |
2L | 23513712 | 2L | 8322774..8322949 | 472..297 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8321276..8322245 | 1832..863 | 4835 | 99.8 | Minus |
2L | 23513712 | 2L | 8322309..8322702 | 866..473 | 1970 | 100 | Minus |
2L | 23513712 | 2L | 8324958..8325256 | 299..1 | 1495 | 100 | Minus |
2L | 23513712 | 2L | 8322774..8322949 | 472..297 | 880 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1360 | 3409 | 1360 1360 3409bp | 3003..3084 | 1779..1692 | 119 | 64.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8320208..8321169 | 867..1828 | 99 | <- | Minus |
chr2L | 8321235..8321628 | 473..866 | 100 | <- | Minus |
chr2L | 8321700..8321873 | 299..472 | 100 | <- | Minus |
chr2L | 8323872..8324169 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 1..444 | 244..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 1..444 | 244..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 1..444 | 244..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 1..444 | 244..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 1..444 | 244..687 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 44..1871 | 1..1828 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 44..1871 | 1..1828 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 7..1834 | 1..1828 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 44..1871 | 1..1828 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7781-RA | 7..1834 | 1..1828 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8322774..8322947 | 299..472 | 100 | <- | Minus |
2L | 8322309..8322702 | 473..866 | 100 | <- | Minus |
2L | 8321280..8322241 | 867..1828 | 99 | <- | Minus |
2L | 8324959..8325256 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8322774..8322947 | 299..472 | 100 | <- | Minus |
2L | 8322309..8322702 | 473..866 | 100 | <- | Minus |
2L | 8321280..8322241 | 867..1828 | 99 | <- | Minus |
2L | 8324959..8325256 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8322774..8322947 | 299..472 | 100 | <- | Minus |
2L | 8322309..8322702 | 473..866 | 100 | <- | Minus |
2L | 8321280..8322241 | 867..1828 | 99 | <- | Minus |
2L | 8324959..8325256 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8321280..8322241 | 867..1828 | 99 | <- | Minus |
arm_2L | 8322309..8322702 | 473..866 | 100 | <- | Minus |
arm_2L | 8322774..8322947 | 299..472 | 100 | <- | Minus |
arm_2L | 8324959..8325256 | 1..298 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8321280..8322241 | 867..1828 | 99 | <- | Minus |
2L | 8322309..8322702 | 473..866 | 100 | <- | Minus |
2L | 8322774..8322947 | 299..472 | 100 | <- | Minus |
2L | 8324959..8325256 | 1..298 | 100 | Minus |
Translation from 243 to 686
> RE71014.hyp MQYIYVISALILAIAVQQGYAIKCFVCNSHKDANCALDIPPDNLLKDCDE QYSSRGKGIPTYCRKITQIIEFSVNSLPPDSRVIRTCAYQNQTSTNYCYQ RAGFGGRQVVCSCDTDNCNGAGAMGASALGVAAMVGLLLSARQYLQR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7781-PB | 147 | CG7781-PB | 1..147 | 1..147 | 779 | 100 | Plus |
CG7781-PA | 147 | CG7781-PA | 1..147 | 1..147 | 779 | 100 | Plus |
CG14275-PB | 148 | CG14275-PB | 6..144 | 3..141 | 147 | 29.5 | Plus |
CG14275-PA | 148 | CG14275-PA | 6..144 | 3..141 | 147 | 29.5 | Plus |
crok-PA | 151 | CG17218-PA | 7..142 | 5..140 | 146 | 32.7 | Plus |
Translation from 243 to 686
> RE71014.pep MQYIYVISALILAIAVQQGYAIKCFVCNSHKDANCALDIPPDNLLKDCDE QYSSRGKGIPTYCRKITQIIEFSVNSLPPDSRVIRTCAYQNQTSTNYCYQ RAGFGGRQVVCSCDTDNCNGAGAMGASALGVAAMVGLLLSARQYLQR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15263-PA | 147 | GF15263-PA | 1..146 | 1..146 | 703 | 91.1 | Plus |
Dana\GF14635-PA | 148 | GF14635-PA | 6..139 | 3..140 | 164 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23454-PA | 147 | GG23454-PA | 1..147 | 1..147 | 769 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10175-PA | 148 | GH10175-PA | 1..148 | 1..147 | 682 | 86.5 | Plus |
Dgri\GH11591-PA | 145 | GH11591-PA | 4..145 | 2..147 | 160 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7781-PB | 147 | CG7781-PB | 1..147 | 1..147 | 779 | 100 | Plus |
CG7781-PA | 147 | CG7781-PA | 1..147 | 1..147 | 779 | 100 | Plus |
CG14275-PB | 148 | CG14275-PB | 6..144 | 3..141 | 147 | 29.5 | Plus |
CG14275-PA | 148 | CG14275-PA | 6..144 | 3..141 | 147 | 29.5 | Plus |
crok-PA | 151 | CG17218-PA | 7..142 | 5..140 | 146 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14231-PA | 148 | GI14231-PA | 1..148 | 1..147 | 660 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18503-PA | 147 | GL18503-PA | 1..147 | 1..147 | 718 | 91.2 | Plus |
Dper\GL19613-PA | 145 | GL19613-PA | 23..139 | 21..139 | 153 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20584-PA | 147 | GA20584-PA | 1..147 | 1..147 | 718 | 91.2 | Plus |
Dpse\GA26031-PA | 145 | GA26031-PA | 23..139 | 21..139 | 153 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13045-PA | 147 | GM13045-PA | 1..147 | 1..147 | 769 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22419-PA | 147 | GD22419-PA | 1..147 | 1..147 | 769 | 99.3 | Plus |
Dsim\GD23524-PA | 148 | GD23524-PA | 6..144 | 3..141 | 137 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20526-PA | 148 | GJ20526-PA | 1..148 | 1..147 | 672 | 86.5 | Plus |
Dvir\GJ17665-PA | 145 | GJ17665-PA | 5..122 | 1..124 | 138 | 27.5 | Plus |
Dvir\GJ17714-PA | 151 | GJ17714-PA | 8..135 | 6..131 | 133 | 32.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24231-PA | 147 | GK24231-PA | 1..147 | 1..147 | 667 | 83 | Plus |