BDGP Sequence Production Resources |
Search the DGRC for RE71337
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 713 |
Well: | 37 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13216-RA |
Protein status: | RE71337.pep: gold |
Preliminary Size: | 777 |
Sequenced Size: | 901 |
Gene | Date | Evidence |
---|---|---|
CG13216 | 2001-12-13 | Blastp of sequenced clone |
CG13216 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13216 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13216 | 2008-04-29 | Release 5.5 accounting |
CG13216 | 2008-08-15 | Release 5.9 accounting |
CG13216 | 2008-12-18 | 5.12 accounting |
901 bp (901 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070610
> RE71337.complete AGACGGTTGCCTCTAGAGATAGCTACCGAAATGACCAAGTTCGTTGCGAA GAAAGCTATCCTGCTGCTCTCCCTGCTCCTTCTGGGCACGGCGGAGTCAA AGCCACTGGATGCGGAACAGCAGCATATCGATGATCAGCATGTGCGAAAG GAGCGTCAGCTGAAGATGGCCGGTTCTGCGGATCCAGACGTTAAAATGGT GGCCAACGTGACTCCAGCGACGGGATCTCAACCAATGTCGATGACCATGG GTGTGCCAATGAACCAGATGGCCCTGAGCTCGGTCGGTGGCCAGTTGGTG CGGTATCCCAACTACCCGGGTCTGATCTATCCTGGCCTTGCGCCGGCACC TGGCCTAAATGGTGTTCCCGGTCTGCAGACGAACATTGCCAACAACTATC CCTCGTATCCGGATCCCAATCTGACTGGTTCAGTTCCTGGCTTCAATCCC TTTGGCTCATTCGGCTACCCAGGCGTGGCACCCATGTATGGAAACTCCCT GATGTATCCCAACCCCCAGCTGCCTAATGGATTTGTGCCCAATCCAGCCG TAGATAACTTTCAATCGCTGAACAATATTGTCAATATGGCCAATGTTCAG GGATTGGCTGGCGGCAGTTCCGGAATATATCCAGCACCTCAAGGATTCGG TGGCGTTAGCCCGGGTCTATATCCCGCTCCGCAGGGATTCGGTGGAGCCA ATCCAGGATTGTATCCAGCACCTCAGGTCAACATGCAGGGATTGTATCCA CCATCCGGCGGTTTCCTGGAGCGCATGAACATGCAGGGCTATGCCCCAGG CTTTTAATTGAGCCTTAAAAATCCATATATAATAAGCTAATTTATTTTAT TTATTTTCGATAAATACAAGAACATTTATACAACAGAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13216-RA | 887 | CG13216-RA | 7..887 | 6..886 | 4390 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7125574..7126454 | 886..6 | 4375 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11238107..11238988 | 887..6 | 4395 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11239306..11240187 | 887..6 | 4395 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 2..55 | 856..803 | 108 | 66.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7125574..7126458 | 1..886 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 1..777 | 31..807 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 1..777 | 31..807 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 1..777 | 31..807 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 1..777 | 31..807 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 1..777 | 31..807 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 2..887 | 1..886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 2..887 | 1..886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 3..888 | 1..886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 2..887 | 1..886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13216-RA | 3..888 | 1..886 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11238108..11238992 | 1..886 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11238108..11238992 | 1..886 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11238108..11238992 | 1..886 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7125613..7126497 | 1..886 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11239307..11240191 | 1..886 | 99 | Minus |
Translation from 3 to 806
> RE71337.hyp QLPLEIATEMTKFVAKKAILLLSLLLLGTAESKPLDAEQQHIDDQHVRKE RQLKMAGSADPDVKMVANVTPATGSQPMSMTMGVPMNQMALSSVGGQLVR YPNYPGLIYPGLAPAPGLNGVPGLQTNIANNYPSYPDPNLTGSVPGFNPF GSFGYPGVAPMYGNSLMYPNPQLPNGFVPNPAVDNFQSLNNIVNMANVQG LAGGSSGIYPAPQGFGGVSPGLYPAPQGFGGANPGLYPAPQVNMQGLYPP SGGFLERMNMQGYAPGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13216-PA | 258 | CG13216-PA | 1..258 | 10..267 | 1379 | 100 | Plus |
Translation from 30 to 806
> RE71337.pep MTKFVAKKAILLLSLLLLGTAESKPLDAEQQHIDDQHVRKERQLKMAGSA DPDVKMVANVTPATGSQPMSMTMGVPMNQMALSSVGGQLVRYPNYPGLIY PGLAPAPGLNGVPGLQTNIANNYPSYPDPNLTGSVPGFNPFGSFGYPGVA PMYGNSLMYPNPQLPNGFVPNPAVDNFQSLNNIVNMANVQGLAGGSSGIY PAPQGFGGVSPGLYPAPQGFGGANPGLYPAPQVNMQGLYPPSGGFLERMN MQGYAPGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12431-PA | 232 | GF12431-PA | 1..232 | 1..258 | 612 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22690-PA | 254 | GG22690-PA | 1..254 | 1..258 | 1112 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21949-PA | 246 | GH21949-PA | 26..221 | 31..205 | 214 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13216-PA | 258 | CG13216-PA | 1..258 | 1..258 | 1379 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19657-PA | 248 | GI19657-PA | 1..108 | 1..124 | 154 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16757-PA | 273 | GL16757-PA | 1..273 | 1..258 | 555 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12129-PA | 273 | GA12129-PA | 1..273 | 1..258 | 553 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20467-PA | 234 | GM20467-PA | 1..216 | 1..216 | 995 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25936-PA | 258 | GD25936-PA | 1..258 | 1..258 | 1253 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15021-PA | 242 | GJ15021-PA | 22..242 | 21..258 | 232 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20653-PA | 228 | GK20653-PA | 2..215 | 1..217 | 286 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13045-PA | 260 | GE13045-PA | 1..260 | 1..258 | 1145 | 91.9 | Plus |