Clone RE71517 Report

Search the DGRC for RE71517

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:715
Well:17
Vector:pFlc-1
Associated Gene/TranscriptCG42673-RB
Protein status:RE71517.pep: gold
Preliminary Size:246
Sequenced Size:3423

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32048 2001-12-13 Blastp of sequenced clone
CG14178 2002-01-01 Sim4 clustering to Release 2
CG32048 2003-01-01 Sim4 clustering to Release 3
CG32048 2008-04-29 Release 5.5 accounting
CG32048 2008-08-15 Release 5.9 accounting
CG32048 2008-12-18 5.12 accounting

Clone Sequence Records

RE71517.complete Sequence

3423 bp (3423 high quality bases) assembled on 2001-12-13

GenBank Submission: AY075524

> RE71517.complete
GCCGTTGTTGTTCGGCGTTCTTTGTGGTCAGACACCAGCGTATACGTATA
CGCAACGTCATCGTTTTTGTCTGACGTCGCTTCGAAAAGCGTGAAAAGTT
CTGAAGTTTTGAATACCGGTTGTATTCTAAATCTAAATCTAAAAGTAACG
GTCGCATATCGGTTTCGTCGTTGCACACGCACGTAATTCGAGTCAATCTC
CGTTAATATTTAAAATTCAAAAACATACATAGCCCACCCCCATCCATAAA
TACATAAGATACACCGCAGACACTGACGATTTCATAAAACAACGTAAAAG
CAGCAGTACGGCCAAAGAATCCAACTGACGCAATTCAATTTGCCAGCATC
ACAGTAACCGCAAGCTCATAAATTGAGATTAAGCAAGAGCGCTCAACTTG
GCAAAACAGACGGTTCGGGTACTCGGAGGGTTTTGGCCAACAGCATAGAG
TCATAGCAATAGCAAATCAATCACTGAGCGCTCGTCGCCCCACCACAATT
TGCATGAGCCAACTCGAAGGCAGCCAGCAGAATACGAAACTGAGTCCGAA
TCTGAAGCTGAATCCGAACCAGAATCCGAATCTGAATCTGAATCTGAATC
AACCGACACAGATTCAGATACAGGGCCATCAGCAACAGCATCCAAGCAGC
CAAAATCAACAGCCAAAGCGTCGGCCAAGTGGCGTTTTATGGCAATTGCG
CCATCAGCTGCAAAAGCGTAGCACGAGGAAGATGAAAACCATTTCATGAT
ACTACAAGTGGTCCGAATCGGTGCTATTGAACTATCTGAGAATGCCGTCG
ACGCCGTACGATCTGGTCCAGGATGACCAGGATCTGCGGGTGCCGCTGCA
CGCCGAGCAGGCCTTCTTCCACGGCATCACATTTCAGGCCAAGTTCGTTG
GCTGGGAAGAGGTGCCACGACCGAACACTCGAGCCGAGATTGTTCAGGCC
ATGCGACGCATAAGGTACGAGTGCAAAGTGCAGAATCTGAAGAAGCGAAA
GGTCACCATTCACATATCGGTAAATGGCGTGCGCGTTGTGCTCAAAAAGC
GCCGTCGAAAAAAAAAGAACTGGACCAATGACCCCGAGGACATCGAGTTG
CTCAATCATCCCATCTATAGAATATTCTACGTGTCCCACGACAGCAGCGA
TCTCAAGATATTCAGCTACATAGCGCGCGATGCCAGCACGGATACGTTCA
AGTGTTCCGTCTTCAAAAGTCACAAAAAGTCTCAGGCGATGCGCATCGTT
CGCACCGTGGGACAAGCCTTTGAAGTGTGCCACAAATTTAATCTTCATAA
GAATTCCCTGGAACCCAATGACGAACGCTCCGATATATCCTCATCGGAGC
TGCTGGACGTGGAGCAGATCAGCGAGCAGCAGCTATCCGAGGATGGTGAA
CGCGGTGGTGGCGACAACGAGACGCCCAAGAAAGAGCACTTGGCCATAAC
GCCCGATCTGAACCACACGCAGCCGCAGCGGCCGAACCACTTGGATATAA
TGCCATCGCATTCGAGTCTACGCAAATCGAACAGCCTGCTGTGCGATGTG
GACGACAAGTCGCCAGGCTCACCTTCCTCGCCGCGCTCTGAGATCACTCA
GCTGAAGGACCAGCTGGAGGCACAGGCTCTGCAGACGCGCCAGGCTCTGG
GTCAACTGATGCTGGTGCGGGAGCAGCTCATCTCGGAGACCAATGCGCGC
ATCGAGGCACAGGCGCGCACCCAACAATTGCTGCAGCAGAACCGCGAGCT
CCTGGAGCACCTGGCCTCTTTGGGGGCCTACAATGAGCAGCAGACAGCCG
GACTCACGTCGGCCAACATCGGAATGGCGCCACAGCAATCGCAGCTACAA
ATGCTGCTGCAGGCCACGAGCAACAACAACAATCTGGCCACGATCAACCA
ACAGATCAGCAATCTTGGCAGCATCAATCAGCAGTTGACCTCGCTGAGTC
ACCAGCTGAGTGGCCTGAATCAGCAGAGCCAGCACCTCCAGAATCTGCAG
CAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAACAAACGCAGGCGGC
ACCGACTGCGGCCACGCCCCCTCCCGCTGCGGGGGGCAGTAGTCCGTATC
CGTCGATGAGTGCGCTGCAGAGCATCAGCAATCAGCTGCAGCAGCAGCAG
CAACAACAGCAGCAGGACGCATTGTCCAAGGATCTGTTCCAGGTGAATCA
GGAGCTGTTGAATCGCCTGCAGGCACTGAACTTGAATGCCAATCCTGGCC
AGAGCCAGCCAACGCCCTCGGCCACGGCGCACAACTCCTTCTTCTATGTG
AATCCCTTGTCCTGCACACCGGCCACGCCAAACAACAATGCTGGCGGAGC
CGGAGGTTTCAATTTCCTAACCTCACCGGCAGCCACGGGAACACTGACCC
CCTCACCGTTGGGCACCATGAATCGGAATTCCTTTGCCGGGAGTTCGTCC
TTGAACGAGGATATACGCCTGAGCATCGAGCAGAATCTGAATAATCTGGA
GGAGCAACTCAAGGCGGCGGTGTCCAATGGCAATCTGGCTGGACTGGCCT
GTGGAGGATCGACCAGCACGCGGGATACCAGTCGTAGCTCCTCCACCCTG
GACTCCCCATCCTCGCCACGTTTGAGGAGCAGCAATAACAACATTAGTCC
TGGAAGCAGCAATGGCAACCAGAACCACAACAATAATAGCAATAGCAATA
GTAGCAGCAGTCGGGAAACGCGATTCAATACGGTTTTGCTGAGGGTCACC
GATGAGGCGGGTCACCAAAGAAAGCTATCGGCCACGCCCAGTTTCATCAC
ACGCAGCACCAGCGAGAAGGTGCCCAATCGCAGCCAGATGATGAGCCAGG
TGCAGAGGACCACCTGGGCGAGGCACACCACCAAATAGGAGCAGGGCTTC
GAAACGCCCAGTGGACCAGGTCATAGGTTAAAGGATACGAAAAGTGGAAG
TGGGCGTGCATGAGGAACGAGTGAATGAGTGGGTGCAACAGTATTAATTT
AGGAGAAATGGAAGCCTACTTTAGTTTTGCATTTTAGGTGTCCTAGCAGA
ACGCATCGCTGGCGTTTAGTGCCAATTATTTGCCCAGCTCAACGTCCGTT
TAAGTGTAATATATCTATGTAATGTATATCTATTTAGCAATATCTTCTAG
CTCAAAACTGTGCCAAAGTCGAAAGTTTATAATACTCGAAAGTTTGGTTA
GCTTCCGGGCCAGCAGCGATAAACCTTAAGTAAAAGTATTTGTGAAACAT
AATCTTAGCATATCAGCAACGAAGAAACTTACTCAAGTTCGCAATAATCG
TTTGAAAGTATTTTCTCTCCCCTAAATGAAAAACTATATCTATACACCTA
GTGATTAAGCTAATGAGTCTAGTCTAAACTGATTAAATTCGATACTGTTA
TTTTTGCAAAAAAAAAAAAAAAA

RE71517.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32048-RA 3679 CG32048-RA 5..3413 4..3410 16945 99.8 Plus
CG32048-RB 4009 CG32048-RB 1559..3743 1228..3410 10825 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:44:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9584593..9586167 1834..3406 7570 98.9 Plus
chr3L 24539361 chr3L 9544753..9545389 257..893 3125 99.4 Plus
chr3L 24539361 chr3L 9539071..9539327 4..262 1200 98.5 Plus
chr3L 24539361 chr3L 9580106..9580312 1228..1434 1035 100 Plus
chr3L 24539361 chr3L 9583953..9584125 1541..1713 865 100 Plus
chr3L 24539361 chr3L 9573383..9573550 1062..1229 825 99.4 Plus
chr3L 24539361 chr3L 9584200..9584324 1711..1835 610 99.2 Plus
chr3L 24539361 chr3L 9583107..9583215 1433..1541 545 100 Plus
chr3L 24539361 chr3L 9573227..9573323 965..1061 455 97.9 Plus
chr3L 24539361 chr3L 9567483..9567556 892..965 370 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:14:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9592725..9594303 1834..3410 7800 99.7 Plus
3L 28110227 3L 9552900..9553536 257..893 3185 100 Plus
3L 28110227 3L 9547223..9547481 4..262 1280 99.6 Plus
3L 28110227 3L 9588238..9588444 1228..1434 1020 99.5 Plus
3L 28110227 3L 9592085..9592257 1541..1713 865 100 Plus
3L 28110227 3L 9581546..9581713 1062..1229 840 100 Plus
3L 28110227 3L 9592332..9592456 1711..1835 625 100 Plus
3L 28110227 3L 9591239..9591347 1433..1541 545 100 Plus
3L 28110227 3L 9581390..9581486 965..1061 485 100 Plus
3L 28110227 3L 9575649..9575722 892..965 370 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9585825..9587403 1834..3410 7810 99.7 Plus
3L 28103327 3L 9546000..9546636 257..893 3185 100 Plus
3L 28103327 3L 9540323..9540581 4..262 1280 99.6 Plus
3L 28103327 3L 9581338..9581544 1228..1434 1020 99.5 Plus
3L 28103327 3L 9585185..9585357 1541..1713 865 100 Plus
3L 28103327 3L 9574646..9574813 1062..1229 840 100 Plus
3L 28103327 3L 9585432..9585556 1711..1835 625 100 Plus
3L 28103327 3L 9584339..9584447 1433..1541 545 100 Plus
3L 28103327 3L 9574490..9574586 965..1061 485 100 Plus
3L 28103327 3L 9568749..9568822 892..965 370 100 Plus
Blast to na_te.dros performed 2019-03-16 06:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2656 1774..2164 270 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2545 1814..1996 165 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6824 568..669 148 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6854 568..669 122 60.2 Plus

RE71517.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:45:52 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9539068..9539323 1..258 98 -> Plus
chr3L 9544755..9545389 259..893 99 -> Plus
chr3L 9567485..9567556 894..965 100 -> Plus
chr3L 9573228..9573323 966..1061 97 -> Plus
chr3L 9573383..9573550 1062..1229 99 -> Plus
chr3L 9580108..9580312 1230..1434 100 -> Plus
chr3L 9583109..9583215 1435..1541 100 -> Plus
chr3L 9583954..9584124 1542..1712 100 -> Plus
chr3L 9584202..9584324 1713..1835 99 -> Plus
chr3L 9584595..9586167 1836..3407 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:37:37 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG32048-RA 1..2097 792..2888 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:16:15 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG42673-RB 1..2097 792..2888 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:41:11 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG42673-RB 1..2097 792..2888 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:42:22 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG32048-RA 1..2097 792..2888 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:19:59 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG42673-RB 1..2097 792..2888 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:37:37 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG32048-RA 1..3408 1..3407 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:16:15 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG42673-RB 1..3408 1..3407 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:41:11 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG42673-RB 1..3408 1..3407 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:42:22 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG32048-RA 1..3408 1..3407 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:19:59 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
CG42673-RB 1..3408 1..3407 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:45:52 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9581546..9581713 1062..1229 100 -> Plus
3L 9547220..9547477 1..258 99 -> Plus
3L 9552902..9553536 259..893 100 -> Plus
3L 9575651..9575722 894..965 100 -> Plus
3L 9581391..9581486 966..1061 100 -> Plus
3L 9588240..9588444 1230..1434 99 -> Plus
3L 9591241..9591347 1435..1541 100 -> Plus
3L 9592086..9592256 1542..1712 100 -> Plus
3L 9592334..9592456 1713..1835 100 -> Plus
3L 9592727..9594299 1836..3407 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:45:52 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9581546..9581713 1062..1229 100 -> Plus
3L 9547220..9547477 1..258 99 -> Plus
3L 9552902..9553536 259..893 100 -> Plus
3L 9575651..9575722 894..965 100 -> Plus
3L 9581391..9581486 966..1061 100 -> Plus
3L 9588240..9588444 1230..1434 99 -> Plus
3L 9591241..9591347 1435..1541 100 -> Plus
3L 9592086..9592256 1542..1712 100 -> Plus
3L 9592334..9592456 1713..1835 100 -> Plus
3L 9592727..9594299 1836..3407 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:45:52 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9581546..9581713 1062..1229 100 -> Plus
3L 9547220..9547477 1..258 99 -> Plus
3L 9552902..9553536 259..893 100 -> Plus
3L 9575651..9575722 894..965 100 -> Plus
3L 9581391..9581486 966..1061 100 -> Plus
3L 9588240..9588444 1230..1434 99 -> Plus
3L 9591241..9591347 1435..1541 100 -> Plus
3L 9592086..9592256 1542..1712 100 -> Plus
3L 9592334..9592456 1713..1835 100 -> Plus
3L 9592727..9594299 1836..3407 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:41:11 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9581340..9581544 1230..1434 99 -> Plus
arm_3L 9584341..9584447 1435..1541 100 -> Plus
arm_3L 9585186..9585356 1542..1712 100 -> Plus
arm_3L 9585434..9585556 1713..1835 100 -> Plus
arm_3L 9540320..9540577 1..258 99 -> Plus
arm_3L 9546002..9546636 259..893 100 -> Plus
arm_3L 9568751..9568822 894..965 100 -> Plus
arm_3L 9574491..9574586 966..1061 100 -> Plus
arm_3L 9574646..9574813 1062..1229 100 -> Plus
arm_3L 9585827..9587399 1836..3407 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:18:25 Download gff for RE71517.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9585434..9585556 1713..1835 100 -> Plus
3L 9584341..9584447 1435..1541 100 -> Plus
3L 9585186..9585356 1542..1712 100 -> Plus
3L 9540320..9540577 1..258 99 -> Plus
3L 9546002..9546636 259..893 100 -> Plus
3L 9568751..9568822 894..965 100 -> Plus
3L 9574491..9574586 966..1061 100 -> Plus
3L 9574646..9574813 1062..1229 100 -> Plus
3L 9581340..9581544 1230..1434 99 -> Plus
3L 9585827..9587399 1836..3407 99   Plus

RE71517.pep Sequence

Translation from 791 to 2887

> RE71517.pep
MPSTPYDLVQDDQDLRVPLHAEQAFFHGITFQAKFVGWEEVPRPNTRAEI
VQAMRRIRYECKVQNLKKRKVTIHISVNGVRVVLKKRRRKKKNWTNDPED
IELLNHPIYRIFYVSHDSSDLKIFSYIARDASTDTFKCSVFKSHKKSQAM
RIVRTVGQAFEVCHKFNLHKNSLEPNDERSDISSSELLDVEQISEQQLSE
DGERGGGDNETPKKEHLAITPDLNHTQPQRPNHLDIMPSHSSLRKSNSLL
CDVDDKSPGSPSSPRSEITQLKDQLEAQALQTRQALGQLMLVREQLISET
NARIEAQARTQQLLQQNRELLEHLASLGAYNEQQTAGLTSANIGMAPQQS
QLQMLLQATSNNNNLATINQQISNLGSINQQLTSLSHQLSGLNQQSQHLQ
NLQQQQQQQQQQQQQQTQAAPTAATPPPAAGGSSPYPSMSALQSISNQLQ
QQQQQQQQDALSKDLFQVNQELLNRLQALNLNANPGQSQPTPSATAHNSF
FYVNPLSCTPATPNNNAGGAGGFNFLTSPAATGTLTPSPLGTMNRNSFAG
SSSLNEDIRLSIEQNLNNLEEQLKAAVSNGNLAGLACGGSTSTRDTSRSS
STLDSPSSPRLRSSNNNISPGSSNGNQNHNNNSNSNSSSSRETRFNTVLL
RVTDEAGHQRKLSATPSFITRSTSEKVPNRSQMMSQVQRTTWARHTTK*

RE71517.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:31:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25140-PA 697 GF25140-PA 1..697 1..698 2805 90.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:31:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15385-PA 1060 GG15385-PA 491..1060 127..698 2227 93.7 Plus
Dere\GG15385-PA 1060 GG15385-PA 1..152 1..152 771 97.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16304-PA 1054 GH16304-PA 490..1054 134..698 1784 77.4 Plus
Dgri\GH16304-PA 1054 GH16304-PA 1..159 1..159 763 93.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG42673-PB 698 CG32048-PA 1..698 1..698 3562 100 Plus
CG42673-PC 904 CG32048-PB 333..904 127..698 2806 97 Plus
CG42673-PD 438 CG42673-PD 1..350 1..350 1794 99.7 Plus
Pdp1-PC 570 CG17888-PC 17..306 380..646 188 29.6 Plus
Pdp1-PL 581 CG17888-PL 17..306 380..646 188 29.6 Plus
Ncoa6-PC 2265 CG14023-PC 1222..1691 192..691 171 22.4 Plus
Ncoa6-PD 2266 CG14023-PD 1223..1692 192..691 171 22.4 Plus
Ncoa6-PF 2467 CG14023-PF 1223..1692 192..691 171 22.4 Plus
Pdp1-PD 647 CG17888-PD 102..402 358..678 170 28.2 Plus
Pdp1-PJ 633 CG17888-PJ 102..408 358..684 169 27.4 Plus
CG44085-PC 836 CG44085-PC 325..780 211..677 167 23.6 Plus
CG44085-PD 918 CG44085-PD 248..703 211..677 167 23.6 Plus
CG44085-PG 942 CG44085-PG 248..703 211..677 167 23.6 Plus
wrd-PA 951 CG7913-PA 19..297 394..685 167 26.6 Plus
wrd-PB 984 CG7913-PB 19..297 394..685 167 26.6 Plus
Ptip-PA 2294 CG32133-PA 943..1299 186..539 166 23.7 Plus
Ptip-PA 2294 CG32133-PA 1489..1731 256..463 166 29.9 Plus
Ptip-PA 2294 CG32133-PA 591..910 191..489 165 25.4 Plus
CG7029-PF 1694 CG7029-PF 110..476 274..643 164 26.4 Plus
CG44085-PH 756 CG44085-PH 248..513 211..507 163 27.5 Plus
CG44085-PL 833 CG44085-PL 325..590 211..507 163 27.5 Plus
CG44085-PI 833 CG44085-PI 325..590 211..507 163 27.5 Plus
CG44085-PM 864 CG44085-PM 210..475 211..507 163 27.5 Plus
CG44085-PF 902 CG44085-PF 248..513 211..507 163 27.5 Plus
CG44085-PK 979 CG44085-PK 325..590 211..507 163 27.5 Plus
CG44085-PJ 979 CG44085-PJ 325..590 211..507 163 27.5 Plus
CG44085-PN 1007 CG44085-PN 325..590 211..507 163 27.5 Plus
tai-PH 1918 CG13109-PH 1213..1590 228..623 163 24.5 Plus
tai-PF 1918 CG13109-PF 1213..1590 228..623 163 24.5 Plus
tai-PE 2014 CG13109-PE 1213..1590 228..623 163 24.5 Plus
tai-PD 2026 CG13109-PD 1213..1590 228..623 163 24.5 Plus
tai-PC 2026 CG13109-PC 1213..1590 228..623 163 24.5 Plus
CG44085-PP 2246 CG44085-PP 221..486 211..507 163 27.5 Plus
CG44085-PO 2381 CG44085-PO 210..475 211..507 163 27.5 Plus
tai-PG 2047 CG13109-PG 1213..1477 228..492 160 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13245-PA 678 GI13245-PA 1..678 35..698 2390 82.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10303-PA 339 GL10303-PA 1..338 54..391 1585 95.6 Plus
Dper\GL20622-PA 254 GL20622-PA 1..254 439..698 893 86.9 Plus
Dper\GL10302-PA 69 GL10302-PA 1..34 1..34 196 100 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16638-PA 692 GA16638-PA 1..692 1..698 2843 90.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25156-PA 691 GM25156-PA 1..691 1..698 3615 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25882-PA 455 GD25882-PA 1..455 237..698 2292 98.1 Plus
Dsim\GD14192-PA 564 GD14192-PA 1..121 35..155 566 95 Plus
Dsim\GD14192-PA 564 GD14192-PA 472..554 132..214 370 84.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12015-PA 648 GJ12015-PA 1..648 54..698 2382 84 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16615-PA 1108 GK16615-PA 507..1108 134..698 1908 77.2 Plus
Dwil\GK16615-PA 1108 GK16615-PA 1..146 1..146 747 98.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20850-PA 695 GE20850-PA 1..695 1..698 3613 98.4 Plus

RE71517.hyp Sequence

Translation from 791 to 2887

> RE71517.hyp
MPSTPYDLVQDDQDLRVPLHAEQAFFHGITFQAKFVGWEEVPRPNTRAEI
VQAMRRIRYECKVQNLKKRKVTIHISVNGVRVVLKKRRRKKKNWTNDPED
IELLNHPIYRIFYVSHDSSDLKIFSYIARDASTDTFKCSVFKSHKKSQAM
RIVRTVGQAFEVCHKFNLHKNSLEPNDERSDISSSELLDVEQISEQQLSE
DGERGGGDNETPKKEHLAITPDLNHTQPQRPNHLDIMPSHSSLRKSNSLL
CDVDDKSPGSPSSPRSEITQLKDQLEAQALQTRQALGQLMLVREQLISET
NARIEAQARTQQLLQQNRELLEHLASLGAYNEQQTAGLTSANIGMAPQQS
QLQMLLQATSNNNNLATINQQISNLGSINQQLTSLSHQLSGLNQQSQHLQ
NLQQQQQQQQQQQQQQTQAAPTAATPPPAAGGSSPYPSMSALQSISNQLQ
QQQQQQQQDALSKDLFQVNQELLNRLQALNLNANPGQSQPTPSATAHNSF
FYVNPLSCTPATPNNNAGGAGGFNFLTSPAATGTLTPSPLGTMNRNSFAG
SSSLNEDIRLSIEQNLNNLEEQLKAAVSNGNLAGLACGGSTSTRDTSRSS
STLDSPSSPRLRSSNNNISPGSSNGNQNHNNNSNSNSSSSRETRFNTVLL
RVTDEAGHQRKLSATPSFITRSTSEKVPNRSQMMSQVQRTTWARHTTK*

RE71517.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:55:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG42673-PB 698 CG32048-PA 1..698 1..698 3562 100 Plus
CG42673-PC 904 CG32048-PB 333..904 127..698 2806 97 Plus
CG42673-PD 438 CG42673-PD 1..350 1..350 1794 99.7 Plus
Pdp1-PC 570 CG17888-PC 17..306 380..646 188 29.6 Plus
Pdp1-PL 581 CG17888-PL 17..306 380..646 188 29.6 Plus