BDGP Sequence Production Resources |
Search the DGRC for RE72485
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 724 |
Well: | 85 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32335-RB |
Protein status: | RE72485.pep: gold |
Sequenced Size: | 1093 |
Gene | Date | Evidence |
---|---|---|
CG9120 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32335 | 2002-02-26 | Blastp of sequenced clone |
CG32335 | 2008-04-29 | Release 5.5 accounting |
CG32335 | 2008-08-15 | Release 5.9 accounting |
CG32335 | 2008-12-18 | 5.12 accounting |
1093 bp (1093 high quality bases) assembled on 2002-02-26
GenBank Submission: AY084189
> RE72485.complete GGTCGCTAGTTTACCTCCAGCAAGGAAAGGCCCTGAACCCGTACCGAAAT ATTTGCAGAGATACCATGAACGGGAGTCACCTTCAAACGGAGCAGTTGCT CTTTGAGGAGAGGCCACTCCATGTGCCGCCCCTCTCGGAACTGAAAAGAG TCATACAGGGTGCTCTGGATGAGAACTTTCGGACCGTAGATGTCAGTGTG GAAGCTTGCCCGGATTTAAGGGACTCCCAGTTTGGCCTTGTGGAGCGTGG ACTGGGCGGAAAGGCCACTCTCCTAGAAGCAGGAGGGCCACCCTATTTGC GGCCCTTGGTGCAGCGAGATAAGCTCTACAATCTGAAGGAGATCACTCGG CGGACCCAAGGAGCAGGAAAGATCTTTGCAGTTGGACCGGGAGCAGGTCC GTGGCCCATTCGTCACTCCAATTGCGAGGGGATCTTTAATTTCTCGCTAA ACGAAGAGGATGAACTCACTCAAGGAAGCTACACGGCCACTGTGAGGGGA GCGAATGAGGATTGTGTTCTCGAAAGGATTCCCGAAACCGAATCTCGTGC TGCTCTGATCCTGAACCTCTTCCTCAGCGAGGGAAAACCAGGTCAAGTGC TCCGAATTTCCGCAAAACAGCGCACTGGAGGGGAAAACTTTGTAGAATGC ATTCGCAAGGGTCTGGAACGGCACTACGGAGACCAGGTGGTGGGCTTGGG AGGAATGTTCGTGGTCAGGAGGGGATGTGTCCACCAGCACGTAATGCGAG ATTTTAGCAAGACGCCCATCCACACACAGGAACAGATCCAAAACTGGTTG AAGTTCTACGAAATGCCCGCCCAGCTAAACGCAGTGGGCACCTTGGTGAC CAAGGACATGGGACTGGACCTCCGCCTGCAGCACTTCCACTCGTTTTCCT TTGCAAACTGGGGAGGCCACTATCACTACGACACCACGCCGGACATTGTG GAGTACGAGGCCTATCTGAACGTGGCCGAAAGAGTGATCCGTGTGGACAG ACCCGTGGCGACCGATCAGTTGGGCAGAGATTGATCTTCATCTGCTCATT TGTTCCTGCCAAAAATAAACGTCTTCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32335-RB | 1211 | CG32335-RB | 115..1196 | 2..1083 | 5395 | 99.9 | Plus |
CG9119-RA | 1374 | CG9119-RA | 981..1189 | 801..1009 | 520 | 83.2 | Plus |
CG9119-RA | 1374 | CG9119-RA | 744..954 | 564..774 | 320 | 76.7 | Plus |
CG9119-RA | 1374 | CG9119-RA | 370..511 | 190..331 | 290 | 80.2 | Plus |
CG9119-RA | 1374 | CG9119-RA | 570..713 | 390..533 | 225 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1201397..1202325 | 1077..149 | 4510 | 99 | Minus |
chr3L | 24539361 | chr3L | 1202950..1203769 | 1009..190 | 1070 | 75.4 | Minus |
chr3L | 24539361 | chr3L | 1202408..1202556 | 150..2 | 730 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1201865..1202799 | 1083..149 | 4660 | 99.9 | Minus |
3L | 28110227 | 3L | 1203428..1204247 | 1009..190 | 1115 | 75.7 | Minus |
3L | 28110227 | 3L | 1202882..1203030 | 150..2 | 745 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1201865..1202799 | 1083..149 | 4660 | 99.8 | Minus |
3L | 28103327 | 3L | 1202882..1203030 | 150..2 | 745 | 100 | Minus |
3L | 28103327 | 3L | 1203428..1203573 | 1009..864 | 370 | 83.5 | Minus |
3L | 28103327 | 3L | 1203663..1203873 | 774..564 | 320 | 76.7 | Minus |
3L | 28103327 | 3L | 1204106..1204247 | 331..190 | 290 | 80.2 | Minus |
3L | 28103327 | 3L | 1203904..1204047 | 533..390 | 225 | 77 | Minus |
3L | 28103327 | 3L | 1203581..1203636 | 856..801 | 205 | 91 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1201397..1202323 | 151..1077 | 99 | <- | Minus |
chr3L | 1202408..1202556 | 1..150 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..969 | 66..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..969 | 66..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..969 | 66..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..969 | 66..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..969 | 66..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..1071 | 2..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..1076 | 2..1077 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 6..1082 | 1..1077 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 1..1071 | 2..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32335-RB | 6..1082 | 1..1077 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1201871..1202797 | 151..1077 | 100 | <- | Minus |
3L | 1202882..1203030 | 1..150 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1201871..1202797 | 151..1077 | 100 | <- | Minus |
3L | 1202882..1203030 | 1..150 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1201871..1202797 | 151..1077 | 100 | <- | Minus |
3L | 1202882..1203030 | 1..150 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1202882..1203030 | 1..150 | 99 | Minus | |
arm_3L | 1201871..1202797 | 151..1077 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1201871..1202797 | 151..1077 | 100 | <- | Minus |
3L | 1202882..1203030 | 1..150 | 99 | Minus |
Translation from 2 to 1033
> RE72485.hyp SLVYLQQGKALNPYRNICRDTMNGSHLQTEQLLFEERPLHVPPLSELKRV IQGALDENFRTVDVSVEACPDLRDSQFGLVERGLGGKATLLEAGGPPYLR PLVQRDKLYNLKEITRRTQGAGKIFAVGPGAGPWPIRHSNCEGIFNFSLN EEDELTQGSYTATVRGANEDCVLERIPETESRAALILNLFLSEGKPGQVL RISAKQRTGGENFVECIRKGLERHYGDQVVGLGGMFVVRRGCVHQHVMRD FSKTPIHTQEQIQNWLKFYEMPAQLNAVGTLVTKDMGLDLRLQHFHSFSF ANWGGHYHYDTTPDIVEYEAYLNVAERVIRVDRPVATDQLGRD*
Translation from 2 to 1033
> RE72485.pep SLVYLQQGKALNPYRNICRDTMNGSHLQTEQLLFEERPLHVPPLSELKRV IQGALDENFRTVDVSVEACPDLRDSQFGLVERGLGGKATLLEAGGPPYLR PLVQRDKLYNLKEITRRTQGAGKIFAVGPGAGPWPIRHSNCEGIFNFSLN EEDELTQGSYTATVRGANEDCVLERIPETESRAALILNLFLSEGKPGQVL RISAKQRTGGENFVECIRKGLERHYGDQVVGLGGMFVVRRGCVHQHVMRD FSKTPIHTQEQIQNWLKFYEMPAQLNAVGTLVTKDMGLDLRLQHFHSFSF ANWGGHYHYDTTPDIVEYEAYLNVAERVIRVDRPVATDQLGRD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10075-PA | 335 | GF10075-PA | 1..319 | 22..340 | 1381 | 78.4 | Plus |
Dana\GF10074-PA | 648 | GF10074-PA | 5..319 | 25..339 | 1333 | 76.2 | Plus |
Dana\GF10074-PA | 648 | GF10074-PA | 336..646 | 25..335 | 1262 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14619-PA | 322 | GG14619-PA | 1..322 | 22..343 | 1601 | 91.9 | Plus |
Dere\GG14618-PA | 322 | GG14618-PA | 1..322 | 22..343 | 1378 | 77 | Plus |
Dere\GG19819-PA | 115 | GG19819-PA | 1..115 | 22..136 | 418 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15990-PA | 324 | GH15990-PA | 5..324 | 25..343 | 1279 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32335-PB | 322 | CG32335-PB | 1..322 | 22..343 | 1702 | 100 | Plus |
CG9119-PA | 322 | CG9119-PA | 1..322 | 22..343 | 1350 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16644-PA | 322 | GI16644-PA | 1..322 | 22..343 | 1327 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16084-PA | 221 | GL16084-PA | 27..221 | 149..343 | 786 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21557-PA | 326 | GA21557-PA | 8..326 | 25..343 | 1336 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14231-PA | 322 | GM14231-PA | 1..322 | 22..343 | 1650 | 95.7 | Plus |
Dsec\GM14230-PA | 322 | GM14230-PA | 1..322 | 22..343 | 1388 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13492-PA | 322 | GD13492-PA | 1..322 | 22..343 | 1681 | 97.2 | Plus |
Dsim\GD13491-PA | 322 | GD13491-PA | 1..322 | 22..343 | 1369 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12897-PA | 326 | GJ12897-PA | 10..326 | 27..343 | 1305 | 74.1 | Plus |