BDGP Sequence Production Resources |
Search the DGRC for RE72529
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 725 |
Well: | 29 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Ada1-2-RA |
Protein status: | RE72529.pep: gold |
Sequenced Size: | 1094 |
Gene | Date | Evidence |
---|---|---|
CG31866 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31866 | 2004-10-25 | Blastp of sequenced clone |
CG31866 | 2008-04-29 | Release 5.5 accounting |
Ada1-2 | 2008-08-15 | Release 5.9 accounting |
Ada1-2 | 2008-12-18 | 5.12 accounting |
1094 bp (1094 high quality bases) assembled on 2004-10-25
GenBank Submission: BT015976
> RE72529.complete TGACTCGAATCAGCTGCATTCATTTGTTTATATAGCAATTCGCAAACAGT TGGATTTTCCTGTTTAGTTGTTATTCCCATTACTAAAATGCTTACCGACA GAGTTCTGGCCACCAAGGAGGCGCTAGTGGTGGCTCTGGGCGACAACTGG GAGCGTTACCGGGCCAACATGAAGAATTGGTTTCGGAGCCGTTGGACTAA GGAGGAATTCGATGCGGAGTCGCGGAAAATCCTAACACCTGACAAACTGC ACCTGCACAATCAGTTCCTGCTCGCCCTGCTCAACAAGATCGACGCCTTT GCTCCCCTGGAGAATCCTCCGGCCGTCCAGACCAGCAGCAGTAGTGGCAA CCGAAGCAAACGGCGCAAAAGAAGTTCCCGCACCTTCGCCGAACGCCTTA ATTTTGAGCTCAGCGACGTCCTGGACTTTGTAGCCGAGGACAACATGCAA ATCATTCGTCCGCCAACCACGATCGGTATTCCGTCGGACCAGCAACAGCA ACAGCTTCAGTCGCAGCGGTACTGCGCGCAGGAACTTTTCCTGCCCGACG CGGGATTCATTATGGGACGATTTCTGATCGGTGCCTGGGAAATCGGACTT GTCTCCGTGGACGACAATGTCGCCGAGTACGTTGCCATGGCCGTGCAAGT TCTGCTCAAGGATCTACTATCGGCAATCATCAAGAAACGAAAGCACTACA AGACCAGCGGCGAGGGAAACTTTTACTACGATGTAGGTGCTCCGTTGCGT GATCCTTCGCTGCGCAACACCGTCACCCGGCAGAAGGTCGACGACACGCC GCTGGAACTGGACAAGGAACTGAATACGGCCAACTTTATGCGGCGACAGA ACGACGATGTGACCTTCCTCTCCGCCTGCGAAGAAGTCCAACCCACCGAA CGCACAGTAATCACCCTCAAGGACTGCCAACTGGCCTTACGGGATCGCAA CCTGATAGGCTCGCATGCCGTCTACTCTATAAACATGGAACGACTCAATA TGATGATGCATTAGCTTATAAGTTCTAATTATTTTATTATATCAGCTTCT GTAAAAATATATACATTATACGCTAGTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11991561..11992445 | 3..887 | 4425 | 100 | Plus |
chr2L | 23010047 | chr2L | 11995481..11996365 | 3..887 | 4395 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 11992510..11992700 | 888..1078 | 955 | 100 | Plus |
chr2L | 23010047 | chr2L | 11996430..11996620 | 888..1078 | 940 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11992908..11993792 | 3..887 | 4425 | 100 | Plus |
2L | 23513712 | 2L | 11996819..11997703 | 3..887 | 4395 | 99.8 | Plus |
2L | 23513712 | 2L | 11993857..11994047 | 888..1078 | 955 | 100 | Plus |
2L | 23513712 | 2L | 11997768..11997958 | 888..1078 | 940 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11992908..11993792 | 3..887 | 4425 | 100 | Plus |
2L | 23513712 | 2L | 11996819..11997703 | 3..887 | 4395 | 99.7 | Plus |
2L | 23513712 | 2L | 11993857..11994047 | 888..1078 | 955 | 100 | Plus |
2L | 23513712 | 2L | 11997768..11997958 | 888..1078 | 940 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord | 7404 | accord ACCORD 7404bp | 6601..6633 | 225..257 | 111 | 81.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11991559..11992445 | 1..887 | 99 | -> | Plus |
chr2L | 11992510..11992700 | 888..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..927 | 88..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..927 | 88..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..927 | 88..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..927 | 88..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..927 | 88..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..1078 | 1..1078 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..1078 | 1..1078 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 5..1082 | 1..1078 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 1..1078 | 1..1078 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ada1-2-RA | 5..1082 | 1..1078 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11993857..11994047 | 888..1078 | 100 | Plus | |
2L | 11992906..11993792 | 1..887 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11993857..11994047 | 888..1078 | 100 | Plus | |
2L | 11992906..11993792 | 1..887 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11993857..11994047 | 888..1078 | 100 | Plus | |
2L | 11992906..11993792 | 1..887 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11992906..11993792 | 1..887 | 99 | -> | Plus |
arm_2L | 11993857..11994047 | 888..1078 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11992906..11993792 | 1..887 | 99 | -> | Plus |
2L | 11993857..11994047 | 888..1078 | 100 | Plus |
Translation from 0 to 1013
> RE72529.hyp SLESAAFICLYSNSQTVGFSCLVVIPITKMLTDRVLATKEALVVALGDNW ERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQFLLALLNKIDAF APLENPPAVQTSSSSGNRSKRRKRSSRTFAERLNFELSDVLDFVAEDNMQ IIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMGRFLIGAWEIGL VSVDDNVAEYVAMAVQVLLKDLLSAIIKKRKHYKTSGEGNFYYDVGAPLR DPSLRNTVTRQKVDDTPLELDKELNTANFMRRQNDDVTFLSACEEVQPTE RTVITLKDCQLALRDRNLIGSHAVYSINMERLNMMMH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ada1-2-PA | 308 | CG31866-PA | 1..308 | 30..337 | 1583 | 100 | Plus |
Ada1-1-PB | 308 | CG31865-PB | 1..308 | 30..337 | 1578 | 99.7 | Plus |
Ada1-1-PA | 308 | CG31865-PA | 1..308 | 30..337 | 1578 | 99.7 | Plus |
Translation from 87 to 1013
> RE72529.pep MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILT PDKLHLHNQFLLALLNKIDAFAPLENPPAVQTSSSSGNRSKRRKRSSRTF AERLNFELSDVLDFVAEDNMQIIRPPTTIGIPSDQQQQQLQSQRYCAQEL FLPDAGFIMGRFLIGAWEIGLVSVDDNVAEYVAMAVQVLLKDLLSAIIKK RKHYKTSGEGNFYYDVGAPLRDPSLRNTVTRQKVDDTPLELDKELNTANF MRRQNDDVTFLSACEEVQPTERTVITLKDCQLALRDRNLIGSHAVYSINM ERLNMMMH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15138-PA | 313 | GF15138-PA | 1..313 | 1..308 | 1366 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23753-PA | 307 | GG23753-PA | 1..307 | 1..308 | 1601 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13820-PA | 321 | GH13820-PA | 4..321 | 2..308 | 1322 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ada1-2-PA | 308 | CG31866-PA | 1..308 | 1..308 | 1583 | 100 | Plus |
Ada1-1-PB | 308 | CG31865-PB | 1..308 | 1..308 | 1578 | 99.7 | Plus |
Ada1-1-PA | 308 | CG31865-PA | 1..308 | 1..308 | 1578 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24825-PA | 319 | GI24825-PA | 4..319 | 2..308 | 1290 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18540-PA | 305 | GL18540-PA | 1..305 | 1..308 | 1346 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16534-PA | 305 | GA16534-PA | 1..305 | 1..308 | 1346 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26692-PA | 308 | GM26692-PA | 1..308 | 1..308 | 1623 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23805-PA | 308 | GD23805-PA | 1..308 | 1..308 | 1630 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22528-PA | 318 | GJ22528-PA | 4..318 | 2..308 | 1258 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14963-PA | 321 | GK14963-PA | 1..321 | 1..308 | 1334 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18560-PA | 308 | GE18560-PA | 1..308 | 1..308 | 1618 | 97.4 | Plus |