RE72667.complete Sequence
451 bp (451 high quality bases) assembled on 2004-01-31
GenBank Submission: BT011528
> RE72667.complete
ACAACAAAATGCGCTTCCTATTCGCTCTACTTCTCAGCGTGCTCCTGTGT
CTGCTCCTGGCTCAGGAGGGCAGTAGCAGCACATCTACATCCTCGACGGC
GACCACATCCACCGACTCCTCTGCCACCACTACCACGGCTTCATCCGCCA
CCACCACTACCACCACTGCCTCCTCCGCATCCACCACGACCACTGCCTCC
TCTTCCTCCTCCTCGGCGGAGGCCAGGAGGCGCAGACGTGCTCGCCGTCG
TCGCCTGGCTCGTGAGCGCCGTCGTCGCCAGGAGCGGAGACAGCGCCAGG
AAAAGAGGAGGCGCAGGATGGAGCAGCTGCTGGTGAGGCAGCGTCGCCTG
ATCAATCAACTTCAGGGATAGATAGGGCTGATTACCAATGTTACTAGCAA
TATAAAAATAAAGCCATAAGTGCTAATTAATGTGCAAAAAAAAAAAAAAA
A
RE72667.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:05:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32453-RA | 434 | CG32453-RA | 1..434 | 1..434 | 2170 | 100 | Plus |
CG14454-RA | 856 | CG14454-RA | 1..370 | 1..370 | 1835 | 99.7 | Plus |
CG14452-RA | 485 | CG14452-RA | 73..276 | 63..266 | 685 | 90.3 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:15:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 22686143..22686577 | 1..435 | 2175 | 100 | Plus |
chr3L | 24539361 | chr3L | 22681055..22681424 | 370..1 | 1835 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 22682436..22682639 | 266..63 | 665 | 90.3 | Minus |
chr3L | 24539361 | chr3L | 22684928..22685131 | 63..266 | 665 | 90.3 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:15:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:15:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22697239..22697673 | 1..435 | 2175 | 100 | Plus |
3L | 28110227 | 3L | 22692151..22692520 | 370..1 | 1835 | 99.7 | Minus |
3L | 28110227 | 3L | 22693532..22693735 | 266..63 | 665 | 90.3 | Minus |
3L | 28110227 | 3L | 22696024..22696227 | 63..266 | 665 | 90.3 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:52:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 22690339..22690773 | 1..435 | 2175 | 100 | Plus |
3L | 28103327 | 3L | 22685251..22685620 | 370..1 | 1835 | 99.7 | Minus |
3L | 28103327 | 3L | 22689124..22689327 | 63..266 | 685 | 90.3 | Plus |
3L | 28103327 | 3L | 22686632..22686835 | 266..63 | 685 | 90.3 | Minus |
Blast to na_te.dros performed on 2019-03-15 20:15:48 has no hits.
RE72667.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:16:34 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 22686143..22686243 | 1..101 | 100 | == | Plus |
chr3L | 22686343..22686577 | 201..435 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:36:11 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..363 | 9..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:40:34 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..363 | 9..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:05:14 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..363 | 9..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:29:25 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..363 | 9..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:32:23 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..363 | 9..371 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:49:35 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..434 | 1..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:40:34 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..434 | 1..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:05:14 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 10..444 | 1..435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:29:25 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 1..434 | 1..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:32:23 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32453-RA | 10..444 | 1..435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:16:34 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22697239..22697673 | 1..435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:16:34 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22697239..22697673 | 1..435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:16:34 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22697239..22697673 | 1..435 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:05:14 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22690339..22690773 | 1..435 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:01:49 Download gff for
RE72667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22690339..22690773 | 1..435 | 100 | | Plus |
RE72667.pep Sequence
Translation from 2 to 370
> RE72667.pep
NKMRFLFALLLSVLLCLLLAQEGSSSTSTSSTATTSTDSSATTTTASSAT
TTTTTASSASTTTTASSSSSSAEARRRRRARRRRLARERRRRQERRQRQE
KRRRRMEQLLVRQRRLINQLQG*
RE72667.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14454-PB | 120 | CG14454-PB | 1..120 | 3..122 | 559 | 100 | Plus |
CG14454-PA | 120 | CG14454-PA | 1..120 | 3..122 | 559 | 100 | Plus |
CG32453-PB | 120 | CG32453-PB | 1..120 | 3..122 | 559 | 100 | Plus |
CG32453-PA | 120 | CG32453-PA | 1..120 | 3..122 | 559 | 100 | Plus |
CG12546-PA | 117 | CG12546-PA | 1..117 | 3..122 | 408 | 74.2 | Plus |
CG14452-PA | 117 | CG14452-PA | 1..117 | 3..122 | 408 | 74.2 | Plus |
CG14453-PA | 133 | CG14453-PA | 1..133 | 3..122 | 294 | 54.4 | Plus |
CG14265-PB | 119 | CG14265-PB | 1..118 | 3..105 | 205 | 46.6 | Plus |
CG12491-PA | 157 | CG12491-PA | 62..156 | 24..115 | 196 | 48.4 | Plus |
CG34105-PA | 157 | CG34105-PA | 62..156 | 24..115 | 196 | 48.4 | Plus |
CG32188-PA | 105 | CG32188-PA | 1..105 | 3..118 | 189 | 45.8 | Plus |
CG32189-PA | 105 | CG32189-PA | 1..105 | 3..118 | 189 | 45.8 | Plus |
CG32071-PA | 150 | CG32071-PA | 11..127 | 3..115 | 189 | 41.2 | Plus |
CG13560-PB | 181 | CG13560-PB | 93..180 | 23..105 | 184 | 46.6 | Plus |
CG13560-PA | 181 | CG13560-PA | 93..180 | 23..105 | 184 | 46.6 | Plus |
ng3-PB | 146 | CG10788-PB | 8..111 | 9..115 | 179 | 41.8 | Plus |
ng2-PA | 112 | CG14266-PA | 2..112 | 2..108 | 176 | 36.9 | Plus |
ng1-PA | 107 | CG10781-PA | 2..104 | 2..102 | 175 | 41.5 | Plus |
CG7377-PA | 94 | CG7377-PA | 8..92 | 9..95 | 173 | 45.1 | Plus |
CG12522-PA | 137 | CG12522-PA | 1..129 | 3..115 | 171 | 37.2 | Plus |
CG33268-PA | 94 | CG33268-PA | 8..92 | 9..95 | 167 | 44 | Plus |
CG13560-PB | 181 | CG13560-PB | 77..179 | 23..115 | 166 | 41.7 | Plus |
CG13560-PA | 181 | CG13560-PA | 77..179 | 23..115 | 166 | 41.7 | Plus |
CG13560-PB | 181 | CG13560-PB | 67..177 | 23..105 | 164 | 35.1 | Plus |
CG13560-PA | 181 | CG13560-PA | 67..177 | 23..105 | 164 | 35.1 | Plus |
CG15741-PA | 135 | CG15741-PA | 1..132 | 3..115 | 160 | 31.1 | Plus |
CG33267-PB | 94 | CG33267-PB | 8..92 | 9..95 | 156 | 42.2 | Plus |
CG14850-PA | 158 | CG14850-PA | 65..156 | 25..108 | 149 | 41.3 | Plus |
CG32198-PB | 136 | CG32198-PB | 7..111 | 6..104 | 142 | 38.1 | Plus |
CG14237-PB | 121 | CG14237-PB | 10..120 | 10..119 | 140 | 40 | Plus |
CG42815-PA | 101 | CG32186-PA | 1..100 | 3..106 | 138 | 35.2 | Plus |
CG14850-PA | 158 | CG14850-PA | 71..154 | 23..104 | 136 | 40 | Plus |
RE72667.hyp Sequence
Translation from 2 to 370
> RE72667.hyp
NKMRFLFALLLSVLLCLLLAQEGSSSTSTSSTATTSTDSSATTTTASSAT
TTTTTASSASTTTTASSSSSSAEARRRRRARRRRLARERRRRQERRQRQE
KRRRRMEQLLVRQRRLINQLQG*
RE72667.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:27:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32453-PB | 120 | CG32453-PB | 1..120 | 3..122 | 559 | 100 | Plus |
CG32453-PA | 120 | CG32453-PA | 1..120 | 3..122 | 559 | 100 | Plus |
CG14454-PB | 120 | CG14454-PB | 1..120 | 3..122 | 559 | 100 | Plus |
CG14454-PA | 120 | CG14454-PA | 1..120 | 3..122 | 559 | 100 | Plus |
CG14452-PA | 117 | CG14452-PA | 1..117 | 3..122 | 408 | 74.2 | Plus |