Clone RE72705 Report

Search the DGRC for RE72705

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:727
Well:5
Vector:pFlc-1
Associated Gene/TranscriptMad-RA
Protein status:RE72705.pep: gold
Preliminary Size:2654
Sequenced Size:2726

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12399 2002-01-01 Sim4 clustering to Release 2
CG12399 2003-01-01 Sim4 clustering to Release 3
CG12399 2003-02-24 Blastp of sequenced clone
Mad 2008-04-29 Release 5.5 accounting
Mad 2008-08-15 Release 5.9 accounting
Mad 2008-12-18 5.12 accounting

Clone Sequence Records

RE72705.complete Sequence

2726 bp (2726 high quality bases) assembled on 2003-02-24

GenBank Submission: BT004845

> RE72705.complete
GAGTCATGGTCACACTGTTTTCAATGGTCAATGTTGTGTGTGTTGCATTT
CGTGATAAACAATTTTGAAAAACAATTTACGCACATTTGCGTGTCGAAAA
ACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCA
CTATCCGCCCGCTGATAGTTATACCGGTTATCGGGTGACTCCACCCCAAA
TCAACGGCGGCACCACCACCACCACCACCATCAGCAGCGGCAGCAGCAAC
AACAACAACATCCACCACATCAACAATAACAATAACCACATCTGCAGCAG
TGGCAGCAGCAACAACCTCAATTTGACGACAGCAATCAGCGGCAGCAGCA
ACAGAATGGACACCGACGATGTGGAATCGAACACAAGCAGCGCGATGTCC
ACACTGGGCTCGCTATTCTCCTTCACATCGCCGGCGGTGAAGAAGCTGCT
GGGCTGGAAACAGGGTGACGAAGAGGAGAAGTGGGCGGAGAAGGCCGTCG
ACAGTCTGGTGAAGAAGTTGAAGAAGCGCAAGGGCGCCATCGAGGAGCTG
GAGCGTGCGCTCTCCTGTCCCGGTCAGCCCTCGAAGTGTGTCACCATTCC
ACGCTCGCTGGACGGACGATTACAGGTCTCCCATCGCAAGGGTCTGCCGC
ATGTGATCTACTGCCGCGTGTGGCGCTGGCCAGATCTGCAGTCGCACCAC
GAACTGAAGCCACTCGAGCTGTGCCAGTATCCGTTCAGCGCCAAGCAGAA
GGAGGTGTGCATCAATCCGTATCACTATAAGCGCGTGGAGAGTCCGGTGC
TCCCGCCAGTACTCGTTCCTCGCCACTCGGAATTCGCGCCCGGTCACTCG
ATGCTGCAGTTCAACCATGTGGCCGAGCCCAGTATGCCGCACAATGTGAG
CTACTCGAACAGTGGATTCAACTCGCACAGCTTGAGCACCAGCAACACAT
CGGTGGGCAGTCCGAGTTCCGTCAACTCCAATCCCAATTCGCCGTACGAC
AGCTTGGCGGGAACACCGCCACCCGCCTACAGTCCCTCGGAGGATGGCAA
CTCCAACAATCCGAACGACGGTGGCCAGCTGCTGGATGCTCAGATGGGCG
ATGTTGCCCAGGTTAGCTATTCGGAGCCCGCCTTCTGGGCGTCGATAGCC
TACTACGAGCTAAATTGCCGCGTGGGCGAGGTGTTCCACTGCAACAACAA
CTCCGTGATCGTTGACGGTTTCACGAATCCTTCCAACAACTCGGACCGCT
GCTGTCTCGGCCAGCTGAGCAACGTGAACAGGAATAGCACCATCGAGAAC
ACACGCCGTCATATAGGCAAGGGTGTTCATTTATACTATGTGACCGGCGA
GGTCTACGCCGAATGCCTATCCGACTCCGCCATTTTCGTGCAGTCGCGCA
ACTGCAACTACCACCACGGATTCCATCCGAGCACCGTGTGCAAAATACCG
CCGGGCTGCTCGCTGAAGATCTTCAACAATCAGGAATTTGCTCAGCTGCT
GTCGCAGTCGGTGAACAATGGATTCGAGGCCGTCTACGAGCTGACAAAGA
TGTGCACGATCCGGATGTCGTTCGTGAAGGGCTGGGGTGCGGAGTATCAT
CGCCAGGATGTGACCTCGACGCCCTGTTGGATTGAAATCCATCTGCACGG
GCCGCTCCAGTGGCTGGACAAGGTGCTCACCCAAATGGGCTCTCCGCATA
ATGCAATTAGTTCGGTATCCTAAGCTTAAGATGAGGCTCGAGTCCTCAAT
GGAGACGGAAGAGAAGGAACACAAAACCGGTAGCTAAATGATGAGTGCGT
GTGAGTGAAAGCTAAGTGTGAAAAGACGTAGAGAACACAGGACAATGGAG
AGAGCATAGGTCTGTAGGCCTGAGGATGGAGGTCCATGCCACTCAGTCGC
AGATTTATATAGATGATGTACGGCAGCTACTCCAATACCCGCCCTTTGCC
CATATTTTATAGTTTATCGTATGATTTTCTATGCGAATGTCATTCCTAAC
GCTAAAACAGAGTAATGAAAATGGACAGCGAGCTAAGAAACCAATTACAA
AATGGTATAACTATTTACAATGATCTACATGCTATAATATTAATGATCTA
TGCCCATTGGCAAAACAGTTCTTGTTCAAGTCTATTTCAAGTGCTAATTA
TGTGTCATTGCAAAACTGCTTTAAATATAAAAACACATTGAATTAATCCT
ACCAACTTTAATTACATAAGGAACAAGTAACTTACGTAGGGATATGAAAA
CACTTATTGCAATACATTTCTTAAAATGATTTTGAAGAAGCCCTAGCTTA
TGTTTTATTTTTCTCATTTGCGGTTCGCCTTGGATCAACGAATTCAATGT
TCAATATAGTTGATTTAAATATATATATGGTTTAACTAATTTTAAGTTGC
AAACAAATCGAAAACATCAAACAAGAAAAGATACCAGCGAAATTTAAGAA
TGGAAAAATGCTACTGAATCAATACGTTTTCCCAGACAATGATCTTTTGT
TATCTTAAGTAAAACTAATATTGTTTAGACCACGAGAAAATTGCCTTTTT
ATATAAATATACATGTATAACTTTACTCTAGTTATCGTAAGCTTATGATT
TTCTCTGATTTTGTTTTGAATTACACTTTTGTGCGCAGAAAAATAAGTAG
ACGATAATAAAAAAAAAAACAAACGAAATGCTTACTTCTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA

RE72705.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
Mad.c 3105 Mad.c 21..2717 2..2698 13470 99.9 Plus
Mad-RA 2838 Mad-RA 85..2781 2..2698 13470 99.9 Plus
Mad.a 2931 Mad.a 326..2874 150..2698 12730 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3146113..3146988 2690..1815 4320 99.5 Minus
chr2L 23010047 chr2L 3147683..3148377 1317..623 3445 99.7 Minus
chr2L 23010047 chr2L 3146988..3147464 1791..1315 2385 100 Minus
chr2L 23010047 chr2L 3148439..3148919 627..150 2325 99.4 Minus
chr2L 23010047 chr2L 3159137..3159284 149..2 725 99.3 Minus
chrX 22417052 chrX 8031095..8031360 1689..1424 535 80.1 Minus
chr3L 24539361 chr3L 14017765..14017876 321..210 215 79.5 Minus
chrX 22417052 chrX 8032208..8032290 717..635 205 83.1 Minus
chr3L 24539361 chr3L 14017781..14017860 311..232 190 82.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:15:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3146444..3147827 2698..1315 6905 99.9 Minus
2L 23513712 2L 3148046..3148740 1317..623 3475 100 Minus
2L 23513712 2L 3148802..3149279 627..150 2390 100 Minus
2L 23513712 2L 3159494..3159641 149..2 740 100 Minus
X 23542271 X 8139256..8139521 1689..1424 550 80.5 Minus
3L 28110227 3L 14027692..14027803 321..210 215 79.5 Minus
X 23542271 X 8140369..8140451 717..635 205 83.1 Minus
3L 28110227 3L 14027708..14027787 311..232 190 82.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3146444..3147827 2698..1315 6905 99.9 Minus
2L 23513712 2L 3148046..3148740 1317..623 3475 100 Minus
2L 23513712 2L 3148802..3149279 627..150 2390 100 Minus
2L 23513712 2L 3159494..3159641 149..2 740 100 Minus
X 23527363 X 8147354..8147619 1689..1424 550 80.4 Minus
3L 28103327 3L 14020792..14020903 321..210 215 79.4 Minus
X 23527363 X 8148467..8148549 717..635 205 83.1 Minus
Blast to na_te.dros performed 2019-03-15 22:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2317..2470 200..353 346 71 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2475 200..367 317 66.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2535 196..391 313 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6771..6922 200..354 310 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6929 200..397 305 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6900 197..389 295 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2371..2514 200..352 277 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6860 224..367 271 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6944 200..388 262 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2447 217..369 261 67.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2392..2542 200..353 258 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6804..6952 200..348 258 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2460 230..391 253 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2404..2521 200..320 238 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6792..6943 200..354 236 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2805..2964 202..364 233 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6869 241..391 233 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2767..2920 200..353 221 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2889 207..352 219 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6839..7009 196..366 215 61.5 Plus
roo 9092 roo DM_ROO 9092bp 1054..1151 219..316 211 68.4 Plus
roo 9092 roo DM_ROO 9092bp 1098..1180 200..283 210 73.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2418..2538 196..316 209 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2419..2541 200..322 201 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2404 253..353 200 69.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2464..2613 200..352 199 60.8 Plus
roo 9092 roo DM_ROO 9092bp 1074..1160 200..286 192 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2843..2997 210..364 191 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2484..2679 196..383 186 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1595 244..321 183 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1500..1579 203..281 181 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6813 262..356 181 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2584..2667 197..277 170 69 Plus
roo 9092 roo DM_ROO 9092bp 1061..1176 268..380 167 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2588..2687 240..342 166 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2595..2696 199..298 163 63.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1519..1605 200..285 162 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2898 246..393 155 61.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 960..1013 209..261 150 77.8 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 912..1058 225..367 149 59.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6857..6942 191..275 148 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2382 289..367 144 68.4 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 494..621 198..316 141 61.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6715..6800 281..364 137 67 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2608..2690 248..327 137 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1501..1586 264..354 136 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2943..2998 214..269 136 71.4 Plus
roo 9092 roo DM_ROO 9092bp 1054..1155 268..371 136 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1500..1577 245..321 135 65.4 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3249..3330 196..274 132 65.9 Plus
roo 9092 roo DM_ROO 9092bp 1059..1165 248..351 131 60.7 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 516..661 232..381 126 58.3 Plus
roo 9092 roo DM_ROO 9092bp 1061..1130 295..364 124 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 5634..5714 217..299 122 67.4 Plus
rover 7318 rover ROVER 7318bp 1232..1294 248..312 122 67.7 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3279..3340 214..275 121 66.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2598..2653 265..320 118 67.9 Plus

RE72705.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:53:28 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3146113..3147462 1317..2690 97 <- Minus
chr2L 3147684..3148374 626..1316 99 <- Minus
chr2L 3148441..3148749 317..625 100 == Minus
chr2L 3148859..3148919 150..210 100 <- Minus
chr2L 3159137..3159284 1..149 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:34:52 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 1..1368 356..1723 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:48:03 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 1..1368 356..1723 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:34:35 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RB 1..1578 146..1723 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:39:26 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 1..1368 356..1723 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:36:44 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RB 1..1578 146..1723 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:34:52 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 1..2646 13..2658 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:48:02 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 1..2646 13..2658 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:34:35 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 2..2691 1..2690 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:39:26 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 1..2646 13..2658 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:36:44 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
Mad-RA 2..2691 1..2690 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:53:28 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3146452..3147825 1317..2690 100 <- Minus
2L 3148047..3148737 626..1316 100 <- Minus
2L 3148804..3149279 150..625 100 <- Minus
2L 3159494..3159641 1..149 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:53:28 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3146452..3147825 1317..2690 100 <- Minus
2L 3148047..3148737 626..1316 100 <- Minus
2L 3148804..3149279 150..625 100 <- Minus
2L 3159494..3159641 1..149 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:53:28 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3146452..3147825 1317..2690 100 <- Minus
2L 3148047..3148737 626..1316 100 <- Minus
2L 3148804..3149279 150..625 100 <- Minus
2L 3159494..3159641 1..149 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:34:35 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3146452..3147825 1317..2690 100 <- Minus
arm_2L 3148047..3148737 626..1316 100 <- Minus
arm_2L 3148804..3149279 150..625 100 <- Minus
arm_2L 3159494..3159641 1..149 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:09:47 Download gff for RE72705.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3146452..3147825 1317..2690 100 <- Minus
2L 3148047..3148737 626..1316 100 <- Minus
2L 3148804..3149279 150..625 100 <- Minus
2L 3159494..3159641 1..149 99   Minus

RE72705.pep Sequence

Translation from 355 to 1722

> RE72705.pep
MDTDDVESNTSSAMSTLGSLFSFTSPAVKKLLGWKQGDEEEKWAEKAVDS
LVKKLKKRKGAIEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHV
IYCRVWRWPDLQSHHELKPLELCQYPFSAKQKEVCINPYHYKRVESPVLP
PVLVPRHSEFAPGHSMLQFNHVAEPSMPHNVSYSNSGFNSHSLSTSNTSV
GSPSSVNSNPNSPYDSLAGTPPPAYSPSEDGNSNNPNDGGQLLDAQMGDV
AQVSYSEPAFWASIAYYELNCRVGEVFHCNNNSVIVDGFTNPSNNSDRCC
LGQLSNVNRNSTIENTRRHIGKGVHLYYVTGEVYAECLSDSAIFVQSRNC
NYHHGFHPSTVCKIPPGCSLKIFNNQEFAQLLSQSVNNGFEAVYELTKMC
TIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNA
ISSVS*

RE72705.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20577-PA 453 GF20577-PA 1..453 1..455 2398 98 Plus
Dana\GF20979-PA 471 GF20979-PA 1..471 20..455 1242 54 Plus
Dana\GF22974-PA 764 GF22974-PA 536..755 258..444 384 38.9 Plus
Dana\GF22974-PA 764 GF22974-PA 48..167 28..147 342 53.7 Plus
Dana\GF17083-PA 568 GF17083-PA 290..564 99..430 250 28 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24457-PA 455 GG24457-PA 1..455 1..455 2451 99.8 Plus
Dere\GG17985-PA 431 GG17985-PA 1..431 20..455 1290 58.6 Plus
Dere\GG11819-PA 763 GG11819-PA 535..754 258..444 385 39.4 Plus
Dere\GG11819-PA 763 GG11819-PA 48..167 28..147 345 53.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10284-PA 455 GH10284-PA 1..455 1..455 2411 97.8 Plus
Dgri\GH24864-PA 509 GH24864-PA 273..509 218..455 902 71.1 Plus
Dgri\GH24864-PA 509 GH24864-PA 1..174 20..194 403 47.3 Plus
Dgri\GH18642-PA 800 GH18642-PA 574..793 258..444 386 39.4 Plus
Dgri\GH18642-PA 800 GH18642-PA 48..167 28..147 351 53.7 Plus
Dgri\GH19558-PA 539 GH19558-PA 230..535 97..430 240 26 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Mad-PB 525 CG12399-PB 71..525 1..455 2468 100 Plus
Mad-PA 455 CG12399-PA 1..455 1..455 2468 100 Plus
Smox-PB 486 CG2262-PB 1..486 20..455 1261 53 Plus
Smox-PA 486 CG2262-PA 1..486 20..455 1261 53 Plus
Med-PB 697 CG1775-PB 381..688 174..444 371 33.5 Plus
Med-PC 771 CG1775-PC 455..762 174..444 371 33.5 Plus
Med-PA 771 CG1775-PA 455..762 174..444 371 33.5 Plus
Med-PB 697 CG1775-PB 48..283 28..246 349 37 Plus
Med-PC 771 CG1775-PC 48..167 28..147 339 53.7 Plus
Med-PA 771 CG1775-PA 48..167 28..147 339 53.7 Plus
Dad-PC 568 CG5201-PC 281..563 98..429 258 28 Plus
Dad-PB 568 CG5201-PB 281..563 98..429 258 28 Plus
Dad-PA 568 CG5201-PA 281..563 98..429 258 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17981-PA 455 GI17981-PA 1..455 1..455 2410 97.8 Plus
Dmoj\GI14415-PA 495 GI14415-PA 259..495 218..455 901 71.1 Plus
Dmoj\GI14415-PA 495 GI14415-PA 1..174 20..194 414 48.9 Plus
Dmoj\GI23400-PA 761 GI23400-PA 535..754 258..444 387 38.9 Plus
Dmoj\GI23400-PA 761 GI23400-PA 48..167 28..147 348 53.7 Plus
Dmoj\GI23854-PA 621 GI23854-PA 271..617 49..430 246 26.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26531-PA 455 GL26531-PA 1..455 1..455 2435 99.1 Plus
Dper\GL20193-PA 474 GL20193-PA 1..474 20..455 1241 54.3 Plus
Dper\GL23637-PA 776 GL23637-PA 548..767 258..444 386 38.9 Plus
Dper\GL23637-PA 776 GL23637-PA 48..167 28..147 345 53.7 Plus
Dper\GL21924-PA 508 GL21924-PA 339..504 261..430 257 35.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28973-PA 455 GA28973-PA 1..455 1..455 2435 99.1 Plus
Dpse\GA15332-PA 474 GA15332-PA 1..474 20..455 1240 54.3 Plus
Dpse\GA14643-PC 777 GA14643-PC 549..768 258..444 385 38.9 Plus
Dpse\GA14643-PB 702 GA14643-PB 474..693 258..444 384 38.9 Plus
Dpse\GA14643-PB 702 GA14643-PB 48..167 28..147 345 53.7 Plus
Dpse\GA14643-PC 777 GA14643-PC 48..167 28..147 344 53.7 Plus
Dpse\GA18732-PA 584 GA18732-PA 232..580 27..430 281 26.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18164-PA 545 GM18164-PA 91..545 1..455 2466 100 Plus
Dsec\GM11208-PA 486 GM11208-PA 250..486 218..455 902 71.1 Plus
Dsec\GM11208-PA 486 GM11208-PA 1..174 20..194 402 47.3 Plus
Dsec\GM16436-PA 769 GM16436-PA 541..760 258..444 386 39.4 Plus
Dsec\GM16436-PA 769 GM16436-PA 48..167 28..147 343 53.7 Plus
Dsec\GM15202-PA 569 GM15202-PA 281..565 98..430 253 28.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22774-PA 440 GD22774-PA 1..440 1..455 2336 96.5 Plus
Dsim\GD24642-PA 384 GD24642-PA 1..174 20..194 403 47.3 Plus
Dsim\GD24642-PA 384 GD24642-PA 250..375 218..344 382 60.2 Plus
Dsim\GD21590-PA 196 GD21590-PA 6..187 295..444 292 37.9 Plus
Dsim\GD19135-PA 570 GD19135-PA 222..566 49..430 250 27.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19553-PA 455 GJ19553-PA 1..455 1..455 2415 98 Plus
Dvir\GJ18762-PA 489 GJ18762-PA 1..489 20..455 1250 53.3 Plus
Dvir\GJ23092-PA 805 GJ23092-PA 579..798 258..444 387 38.9 Plus
Dvir\GJ23092-PA 805 GJ23092-PA 84..203 28..147 350 53.7 Plus
Dvir\GJ10569-PA 593 GJ10569-PA 303..590 97..431 267 27.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18268-PA 455 GK18268-PA 1..455 1..455 2422 98.5 Plus
Dwil\GK24988-PA 490 GK24988-PA 230..490 192..455 906 66.9 Plus
Dwil\GK24988-PA 490 GK24988-PA 1..177 20..194 396 48.1 Plus
Dwil\GK11724-PA 794 GK11724-PA 565..785 258..444 385 38.7 Plus
Dwil\GK11724-PA 794 GK11724-PA 45..164 28..147 344 53.7 Plus
Dwil\GK13383-PA 613 GK13383-PA 235..609 45..430 258 25.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14935-PA 539 GE14935-PA 85..539 1..455 2462 100 Plus
Dyak\GE17479-PA 486 GE17479-PA 250..486 218..455 902 71.1 Plus
Dyak\GE17479-PA 486 GE17479-PA 1..174 20..194 402 47.3 Plus
Dyak\GE10952-PA 768 GE10952-PA 540..759 258..444 381 39.4 Plus
Dyak\GE10952-PA 768 GE10952-PA 48..167 28..147 345 53.7 Plus
Dyak\GE24606-PA 573 GE24606-PA 217..569 42..430 242 26 Plus

RE72705.hyp Sequence

Translation from 355 to 1722

> RE72705.hyp
MDTDDVESNTSSAMSTLGSLFSFTSPAVKKLLGWKQGDEEEKWAEKAVDS
LVKKLKKRKGAIEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHV
IYCRVWRWPDLQSHHELKPLELCQYPFSAKQKEVCINPYHYKRVESPVLP
PVLVPRHSEFAPGHSMLQFNHVAEPSMPHNVSYSNSGFNSHSLSTSNTSV
GSPSSVNSNPNSPYDSLAGTPPPAYSPSEDGNSNNPNDGGQLLDAQMGDV
AQVSYSEPAFWASIAYYELNCRVGEVFHCNNNSVIVDGFTNPSNNSDRCC
LGQLSNVNRNSTIENTRRHIGKGVHLYYVTGEVYAECLSDSAIFVQSRNC
NYHHGFHPSTVCKIPPGCSLKIFNNQEFAQLLSQSVNNGFEAVYELTKMC
TIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNA
ISSVS*

RE72705.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:48
Subject Length Description Subject Range Query Range Score Percent Strand
Mad-PB 525 CG12399-PB 71..525 1..455 2468 100 Plus
Mad-PA 455 CG12399-PA 1..455 1..455 2468 100 Plus
Smox-PB 486 CG2262-PB 1..486 20..455 1261 53 Plus
Smox-PA 486 CG2262-PA 1..486 20..455 1261 53 Plus
Med-PB 697 CG1775-PB 381..688 174..444 371 33.5 Plus