BDGP Sequence Production Resources |
Search the DGRC for RE72832
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 728 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG3262-RC |
Protein status: | RE72832.pep: wuzgold |
Sequenced Size: | 1010 |
Gene | Date | Evidence |
---|---|---|
CG3262-RD | 2009-06-01 | Manual selection by Ken Wan |
1010 bp assembled on 2009-08-05
GenBank Submission: BT089047.1
> RE72832.complete GTAACAATGGAGCGTCTATTGATCAACACGATATGGCGCTCCTACGCAAC AAAATTAACTGGGTCCCAGGTGAAGTTAATGGCGCGGGGATTGCCTAAAA AGCAACCGATTATTGGAGTACAAGATATTATAGTCGTTGCCTCTGGAAAG GGTGGTGTTGGAAAAAGCACCGTGGCAGCTTGGCAAAACTAGGAAAGCGA GTAGGATTGCTGGACGGGGATATCTTCGGGCCTACTATTCCACTTCTCAT GAATGTCCATGGTGAGCCGGTTGTGAACGATAAGAATTTGATGATCCCGC CGCAAAACTACAATGTAAAGTGCTTGTCTATGGGCATGCTGACACCTGTA GAGACCTCTGTTATCTGGCGAGGTCCTCTTGTAATGTCAGCAATACAACG ACTGCTAAAAGGTACTGATTGGGGGCTTCTAGATGTCCTAGTTATAGATA CTCCACCGGGCACTGGAGATGTACATCTCTCACTATCCCAGCATGCACCT ATCACAGGGGTTATCCTGGTAACAACACCTCATACTGCAGCTGTTCAGGT GACCTTGAAAGGTGCAAGCATGTACGAAAAGTTAAATGTTCCTATCTTTG GCGTAGTAGAGAACATGAAGTACACCATTTGTCAGAACTGTAATCAACGA TTGGAGTTTTTTAAAGACAGCCGTATAAGTTCTCTACCGCGCAAGCTAAT TTCTCTTCCGTTAGACTCACGAATAGCGGATAGCAACGAGAGTGGAGTGC CTGTTGTAATAAAATATCCGGACAGCAAGTACTCTTATCTATTTACCCAA TTGGCTGAGGAGATTACACAAATACTTAACGAACAAAGATGTAATCAAAA TCAAAATAACAGTGCACATTAAAAAAAAATTTGTGTATATCAAAAATTCT TATTACTTACATTTGTTATGCTGTACCGCTAAAACCAATAAAGTTATCAG GGGAAAGGGACTGTTGTTTCGTTTCCCGCATTTACATTAAACAACAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 438..400 | 114 | 76.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 22238457..22238634 | 1..178 | 100 | -> | Plus |
chr2L | 22238701..22239516 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 1..165 | 7..171 | 100 | -> | Plus |
CG3262-RD | 178..882 | 172..872 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 1..165 | 7..171 | 100 | -> | Plus |
CG3262-RD | 178..882 | 172..872 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 1..165 | 7..171 | 100 | -> | Plus |
CG3262-RD | 178..882 | 172..872 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RD | 1..165 | 7..171 | 100 | -> | Plus |
CG3262-RD | 178..882 | 172..872 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RC | 21..910 | 1..891 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RC | 21..910 | 1..891 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RE | 11..187 | 1..178 | 99 | -> | Plus |
CG3262-RE | 205..1020 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3262-RE | 11..187 | 1..178 | 99 | -> | Plus |
CG3262-RE | 205..1020 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22239926..22240103 | 1..178 | 100 | -> | Plus |
2L | 22240170..22240985 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22239926..22240103 | 1..178 | 100 | -> | Plus |
2L | 22240170..22240985 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22239926..22240103 | 1..178 | 100 | -> | Plus |
2L | 22240170..22240985 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 22239926..22240103 | 1..178 | 100 | -> | Plus |
arm_2L | 22240170..22240985 | 179..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 22240170..22240985 | 179..995 | 99 | Plus | |
2L | 22239926..22240103 | 1..178 | 100 | -> | Plus |
Translation from 6 to 191
> RE72832.pep MERLLINTIWRSYATKLTGSQVKLMARGLPKKQPIIGVQDIIVVASGKGG VGKSTVAAWQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22737-PA | 310 | GF22737-PA | 1..34 | 25..58 | 136 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21464-PA | 294 | GG21464-PA | 1..58 | 1..58 | 243 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13628-PA | 292 | GH13628-PA | 3..57 | 4..58 | 177 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3262-PE | 293 | CG3262-PE | 1..57 | 1..57 | 281 | 100 | Plus |
CG3262-PD | 293 | CG3262-PD | 1..57 | 1..57 | 281 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11769-PA | 297 | GI11769-PA | 3..57 | 4..58 | 173 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21144-PA | 299 | GL21144-PA | 9..64 | 3..58 | 179 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17025-PA | 299 | GA17025-PA | 9..64 | 3..58 | 179 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18803-PA | 293 | GM18803-PA | 1..57 | 1..57 | 265 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21613-PA | 293 | GD21613-PA | 1..57 | 1..57 | 258 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13135-PA | 298 | GJ13135-PA | 3..57 | 4..58 | 196 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23989-PA | 303 | GK23989-PA | 10..65 | 3..58 | 186 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12953-PA | 293 | GE12953-PA | 1..58 | 1..58 | 251 | 86.2 | Plus |
Translation from 248 to 871
> RE72832.hyp MNVHGEPVVNDKNLMIPPQNYNVKCLSMGMLTPVETSVIWRGPLVMSAIQ RLLKGTDWGLLDVLVIDTPPGTGDVHLSLSQHAPITGVILVTTPHTAAVQ VTLKGASMYEKLNVPIFGVVENMKYTICQNCNQRLEFFKDSRISSLPRKL ISLPLDSRIADSNESGVPVVIKYPDSKYSYLFTQLAEEITQILNEQRCNQ NQNNSAH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3262-PF | 207 | CG3262-PF | 1..207 | 1..207 | 1077 | 100 | Plus |
CG3262-PE | 293 | CG3262-PE | 87..293 | 1..207 | 1077 | 100 | Plus |
CG3262-PD | 293 | CG3262-PD | 87..293 | 1..207 | 1077 | 100 | Plus |
CG17904-PA | 311 | CG17904-PA | 127..285 | 22..166 | 229 | 35.8 | Plus |
CG4858-PA | 260 | CG4858-PA | 75..258 | 19..193 | 224 | 31 | Plus |