Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
RE73310.complete Sequence
2391 bp (2391 high quality bases) assembled on 2002-08-18
GenBank Submission: BT001741
> RE73310.complete
GAAAAAAAGGGGGGAGAGAGAGAGAGAGAGAGCTAGTAAAGGGAACTGCT
GACTGTCAAATGCCGGCGGCCTTAGATTTTTCGACTATTTTCAATAAAAT
TGTGAAATACCAGTGAAAAATTAAAGCAAATAAATAAAATGCAGGAGCAG
GAGATGGAGGTGGAAGTGGGGGACCCGGCAAAGGCGTCGAATTTGCTGCG
GCTCATCAAGCAGCTGCTGCTGGAAAAAGCTTACGATGGCGTGCGGATGT
TGTTTCAAAGTGCCCAGGAATCGGAAAAGAACACTCGGCTGCTGCCCCAC
ATAGCCATGGATCTATACCATGACGTGTGCTTGGAAAACATTTCCGACGA
GGTGAACTCCCAGGAGCCAGAACTATTCGACTGCTCTGACGAGCTGCTCA
AGCTGCTGGCCAAGTACGCCCCACTGCATGAGCTTATGCTGGAACTGATG
GAGCGCTTGGAAGAGAGTAGCAGTATCAATGTGTTCGGCGCCTATCTGCG
GGCCCTACAAGTTGTGCTGCAGCGACAGGGACGCGACAAGCCGCAGGCCG
TTGAGTGGAGCCTGAATAGCATCTTCACCCATCTCAAGGATTTGCCCCTG
CCCGAATACCTCTCCGAGGGCTATGACGAGGCCCAAGCGCGACTCATAGA
GCAAAACGAACAGGTGGAGGACCTTCTGGCTCACTACATCACCGTGGGAC
TCTTTCGGGAGCCGCTCCGCGATGAAATTCTGCAGCAGGATGTGCGGACA
CCCAGCCAAATATTCAGGGATTGCGGCGTCAACCGGCGCAACATATTCAC
TTGCTTCTTCATTCAGCTGTTGGGACGTCCGTTGGCCCTGCTGGAGATGA
ATCACGCCAAGGAGGACCTTACGAGATCCTACGTGCAGCAGGTTACGGAA
AGCCTGACTCAGGATGCCAACCAGTTCCTGGGGGATCCCTTCTACCTGCT
CAACCTCGTGGAACAGCGTGCCAGATGGCTAAGGAAACTAGATGCCTCGA
GAGGCGTCTACGAGATGAGTTGCCAGAATGTTTTCCTCATCGAGGAGAAA
CTTCCGCTGCATGCTGTAGCCATGTACTATCACTCGCTGTTCGTGGGTAA
CCAACTGCCCACAAACGCACCAAAGGTATATGCACCTTTATTCCTATTCG
AAACGATTGTCTATCTGGCTGAAGTGCTACTCAGGCAGCAGGAGCCTCCC
CTACAATATTGTGGTCTTCGATTAGTGGAACATCATTTGAGTACCTTGCA
GCACTCAGTTCCCACCAGCTCCCTCCAGCTGGATGTCCACAAGCGCTTTT
GCGAAGCCCTTTGCAAGATTGTGGGCTATTCGCCGCAGGTCGCACTTCGG
CAGTTGGGAATTCATGTGCTCAGGCAATTTGTTCTGGCCTTCGATGATCA
TGGAAAGTATCTCATCCTTAAAAATCTGATGGGGACATTGCAGCACGGCG
GACTAATGGGCTACCTCGGAGGGATGTACAAGGACCTTGTTGACAAGGCG
CTAGGGCAATCTGGTCCCATGCCGGAAGTTTATAGCGGAAAGCTCTTCCG
CGAGATGTTGCTGCTCTGCGTCTGTGTGCTGCCCCATGACGTGAAATCCG
ATCTTCTTCTGCACTCCGATCGCCTGTGTCATGCTCTGAATATCCTACGC
TACTTTGCGGCAAGAGACAAGAATGATGTGACTGGCTTCTGGCAGGCTCT
GCCGGAAATTGAAAAGGAATTGCTGGACCCACTGGGAACAGCGCTTAACT
TTTCGATGGCCCATTACAAGGCGTACAAGGAGCGCGTCGAAAAGGGTCAG
AGTGCTTCGGATGATGAACTAATGCAGCGCCAACTCAACATGCTCGCCGT
CAACATAAGCAATAGCGGAATGGCTGGCGGCGACGCGGAGAGCAAGCTGC
CCGACATTGGACGGCAGGAGAAGCTCGATGTGCTGGCCAGTTCCATTACC
AGCTTGGAAACGCTACAATCTTTATATCTGCGCGCCAGAGAGATCATCGA
ACAGTCCGCTCGCCTGCGACGGGTTGCCAATCCATCAGATGCTTAGCTTG
TAGTTTGTCCACAATGAAAGCGAAATGATAACGTAAACTGTGTGTAAACA
GAACCGAAAACGAAATCGAAACTTAAACTGATCTATGTGGTCTGTGGGTT
CTTGGCTGGGGCGATAATTAACCGACTAATTGAGCCAGTTGTGGTGTGCT
AACTAACTGGCCAGCGATGCGGGCTTTGCATTGCGATCTGCGCACTGAAA
TCTAGTTGCACACAAATAGGTACACATAGGTGTGCGTACTTAACACCTAA
GCTGGCAGCGTTTTTCTAATTTTTATAGCCATTTTAAATATGTTTTTGTA
TTTCAAATATATGAATTAGCTAGGCAAAAAAAAAAAAAAAA
RE73310.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:42:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30496-RA | 2375 | CG30496-RA | 1..2375 | 1..2375 | 11860 | 99.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:02:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 3586823..3589197 | 1..2375 | 11830 | 99.9 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:16:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:02:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7699504..7701890 | 1..2387 | 11905 | 99.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:16:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 7700703..7703089 | 1..2387 | 11905 | 99.9 | Plus |
Blast to na_te.dros performed on 2019-03-16 00:02:52 has no hits.
RE73310.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:04:08 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 3586823..3589197 | 1..2375 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:36:35 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..1908 | 139..2046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:16:09 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..1908 | 139..2046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:49:45 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..1908 | 139..2046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:07:07 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..1908 | 139..2046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:56:21 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..1908 | 139..2046 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:39:59 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..2375 | 1..2375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:16:09 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..2375 | 1..2375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:49:45 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 5..2379 | 1..2375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:07:08 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 1..2375 | 1..2375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:56:21 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30496-RA | 5..2379 | 1..2375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:08 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7699504..7701878 | 1..2375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:08 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7699504..7701878 | 1..2375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:08 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7699504..7701878 | 1..2375 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:49:45 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3587009..3589383 | 1..2375 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:39:08 Download gff for
RE73310.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7700703..7703077 | 1..2375 | 99 | | Plus |
RE73310.pep Sequence
Translation from 138 to 2045
> RE73310.pep
MQEQEMEVEVGDPAKASNLLRLIKQLLLEKAYDGVRMLFQSAQESEKNTR
LLPHIAMDLYHDVCLENISDEVNSQEPELFDCSDELLKLLAKYAPLHELM
LELMERLEESSSINVFGAYLRALQVVLQRQGRDKPQAVEWSLNSIFTHLK
DLPLPEYLSEGYDEAQARLIEQNEQVEDLLAHYITVGLFREPLRDEILQQ
DVRTPSQIFRDCGVNRRNIFTCFFIQLLGRPLALLEMNHAKEDLTRSYVQ
QVTESLTQDANQFLGDPFYLLNLVEQRARWLRKLDASRGVYEMSCQNVFL
IEEKLPLHAVAMYYHSLFVGNQLPTNAPKVYAPLFLFETIVYLAEVLLRQ
QEPPLQYCGLRLVEHHLSTLQHSVPTSSLQLDVHKRFCEALCKIVGYSPQ
VALRQLGIHVLRQFVLAFDDHGKYLILKNLMGTLQHGGLMGYLGGMYKDL
VDKALGQSGPMPEVYSGKLFREMLLLCVCVLPHDVKSDLLLHSDRLCHAL
NILRYFAARDKNDVTGFWQALPEIEKELLDPLGTALNFSMAHYKAYKERV
EKGQSASDDELMQRQLNMLAVNISNSGMAGGDAESKLPDIGRQEKLDVLA
SSITSLETLQSLYLRAREIIEQSARLRRVANPSDA*
RE73310.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:16:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13195-PA | 637 | GF13195-PA | 5..637 | 2..635 | 2611 | 77.8 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:16:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH21885-PA | 666 | GH21885-PA | 4..652 | 14..629 | 1924 | 58.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30496-PA | 635 | CG30496-PA | 1..635 | 1..635 | 3255 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:16:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI20384-PA | 631 | GI20384-PA | 2..631 | 5..634 | 2002 | 59.7 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:16:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL10524-PA | 646 | GL10524-PA | 24..629 | 29..629 | 2198 | 68.9 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:16:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA15883-PA | 646 | GA15883-PA | 24..629 | 29..629 | 2198 | 68.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:16:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20974-PA | 459 | GM20974-PA | 1..335 | 1..335 | 1743 | 97 | Plus |
Dsec\GM20974-PA | 459 | GM20974-PA | 337..459 | 513..635 | 609 | 95.9 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:16:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ22110-PA | 672 | GJ22110-PA | 5..652 | 14..628 | 1999 | 60 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:16:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK17802-PA | 641 | GK17802-PA | 12..623 | 16..621 | 2124 | 67.7 | Plus |
RE73310.hyp Sequence
Translation from 138 to 2045
> RE73310.hyp
MQEQEMEVEVGDPAKASNLLRLIKQLLLEKAYDGVRMLFQSAQESEKNTR
LLPHIAMDLYHDVCLENISDEVNSQEPELFDCSDELLKLLAKYAPLHELM
LELMERLEESSSINVFGAYLRALQVVLQRQGRDKPQAVEWSLNSIFTHLK
DLPLPEYLSEGYDEAQARLIEQNEQVEDLLAHYITVGLFREPLRDEILQQ
DVRTPSQIFRDCGVNRRNIFTCFFIQLLGRPLALLEMNHAKEDLTRSYVQ
QVTESLTQDANQFLGDPFYLLNLVEQRARWLRKLDASRGVYEMSCQNVFL
IEEKLPLHAVAMYYHSLFVGNQLPTNAPKVYAPLFLFETIVYLAEVLLRQ
QEPPLQYCGLRLVEHHLSTLQHSVPTSSLQLDVHKRFCEALCKIVGYSPQ
VALRQLGIHVLRQFVLAFDDHGKYLILKNLMGTLQHGGLMGYLGGMYKDL
VDKALGQSGPMPEVYSGKLFREMLLLCVCVLPHDVKSDLLLHSDRLCHAL
NILRYFAARDKNDVTGFWQALPEIEKELLDPLGTALNFSMAHYKAYKERV
EKGQSASDDELMQRQLNMLAVNISNSGMAGGDAESKLPDIGRQEKLDVLA
SSITSLETLQSLYLRAREIIEQSARLRRVANPSDA*
RE73310.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:43:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30496-PA | 635 | CG30496-PA | 1..635 | 1..635 | 3255 | 100 | Plus |