BDGP Sequence Production Resources |
Search the DGRC for RE73396
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 733 |
Well: | 96 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14427-RA |
Protein status: | RE73396.pep: gold |
Preliminary Size: | 759 |
Sequenced Size: | 1178 |
Gene | Date | Evidence |
---|---|---|
CG14427 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14427 | 2002-04-26 | Blastp of sequenced clone |
CG14427 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14427 | 2008-04-29 | Release 5.5 accounting |
CG14427 | 2008-08-15 | Release 5.9 accounting |
CG14427 | 2008-12-18 | 5.12 accounting |
1178 bp (1178 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113551
> RE73396.complete AGAATAGTCGACAAGGAATTGTCAAGCGAGTAACATCATACCAGAGTTTA CTACACTACAACTTTCAAACGAAACCGAAATCATGGGTTGTTGTGCAAGC AATCTGAAGCTCAAGGAGCTGAGCAGCCTGAATAGCAGCATCTATGTGGC CTCCGGCGGATCGGCAAGTCGCTCCCAGAAGCGTTTGTACAGCAGTCGCA ACAGCAGCGGAGTGGGCAGCAGCAGCAGCGGTAGCAGCAGCGGTAGCAGC AGCTCCTCATCGTCCAGTCGCAGCATCTGGAGCCGCTCCAGCCAGCCGAT TTGCGATGATTTCGCAGAGCAACCACAACTGGACAAATCCTGCGGTTACT ACACCTGCAGCAGCGCCAATTCATCGCCGAGAAAGGGCCAGGAGAATGAC GAGGAGATGGAGGGAGTGCTTATGCGCACGCAGGACATGAGTGCATCATC CCGAGACTCTACACAATCCGATCAAATGGTGGGCAATCTGGAGTGGGAGA TGCACATGATGCAGCAGGCGCAGCGCATTATGCCCAAGACCTCGTCGCCG ATTTGCCAAAGAAGGGATAATGCTCAGATGCCTCCCTCATCGTACCAGAA GTGGAGAAACTATCTGCAATCCACGCCAGCGCACATGCTGCACAATGTCA CCCACATTCCGGAGGCAATTGCCGGCCACTTTTGCCCCACCAGCTTTCCG GGCTTCAGCGACCTGGAGGAGATGGAGAGTGCGGCCAAGAGGTTCAAGGT GGATTTCGAGAAGGAACCACTGGAGGAGCCCATGTACACCACCTACCAAT TGCTAGCCGGGCACACGCACACCATATCCACAGATCTGTGAGGCGTGAAG ACCCAACCAATCGCACCATCTCCGCCTGGTTCGGAGTGGTTCGGCGATTG GTGTAGCCCATCGATGTAATACCCGGCGAGGACTGGCAACAGGTGTGCCA GCTGTCAAACAGTTGGGCAATTAATAATTACAAATCCGCTACGATTGCAT TGCCCAGCAATGGCAAATCGACCTATACGATTTTACAAAAATACCTATTA TTTTTTTTGACTGTATATCATACAAACTAGACTTAAGGACAAGGACAATC AACGATGTGTACATTGTTGGATAATCAAATTGTGCTCGCAAATATATTTT ACAATCTCTAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14427-RA | 1162 | CG14427-RA | 1..1162 | 1..1162 | 5795 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6932655..6933816 | 1..1162 | 5795 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7040608..7041769 | 1..1162 | 5795 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7048706..7049867 | 1..1162 | 5795 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6932655..6932843 | 1..189 | 99 | == | Plus |
chrX | 6932908..6933816 | 254..1162 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..759 | 83..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..759 | 83..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..759 | 83..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..759 | 83..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..759 | 83..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..1162 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..1162 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 6..1167 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 1..1162 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14427-RA | 6..1167 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7040608..7041769 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7040608..7041769 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7040608..7041769 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6934641..6935802 | 1..1162 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7048706..7049867 | 1..1162 | 99 | Plus |
Translation from 0 to 840
> RE73396.hyp EQSTRNCQASNIIPEFTTLQLSNETEIMGCCASNLKLKELSSLNSSIYVA SGGSASRSQKRLYSSRNSSGVGSSSSGSSSGSSSSSSSSRSIWSRSSQPI CDDFAEQPQLDKSCGYYTCSSANSSPRKGQENDEEMEGVLMRTQDMSASS RDSTQSDQMVGNLEWEMHMMQQAQRIMPKTSSPICQRRDNAQMPPSSYQK WRNYLQSTPAHMLHNVTHIPEAIAGHFCPTSFPGFSDLEEMESAAKRFKV DFEKEPLEEPMYTTYQLLAGHTHTISTDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14427-PA | 252 | CG14427-PA | 1..252 | 28..279 | 1315 | 100 | Plus |
Translation from 82 to 840
> RE73396.pep MGCCASNLKLKELSSLNSSIYVASGGSASRSQKRLYSSRNSSGVGSSSSG SSSGSSSSSSSSRSIWSRSSQPICDDFAEQPQLDKSCGYYTCSSANSSPR KGQENDEEMEGVLMRTQDMSASSRDSTQSDQMVGNLEWEMHMMQQAQRIM PKTSSPICQRRDNAQMPPSSYQKWRNYLQSTPAHMLHNVTHIPEAIAGHF CPTSFPGFSDLEEMESAAKRFKVDFEKEPLEEPMYTTYQLLAGHTHTIST DL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20971-PA | 255 | GF20971-PA | 1..255 | 1..252 | 826 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19630-PA | 247 | GG19630-PA | 1..247 | 1..252 | 1048 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12603-PA | 254 | GH12603-PA | 1..254 | 1..252 | 614 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14427-PA | 252 | CG14427-PA | 1..252 | 1..252 | 1315 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21576-PA | 268 | GI21576-PA | 1..268 | 1..252 | 619 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26805-PA | 151 | GL26805-PA | 24..89 | 63..123 | 154 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12976-PA | 261 | GA12976-PA | 1..261 | 1..252 | 757 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17502-PA | 247 | GM17502-PA | 1..247 | 1..252 | 1280 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16831-PA | 247 | GD16831-PA | 1..247 | 1..252 | 1277 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15796-PA | 258 | GJ15796-PA | 1..258 | 1..252 | 624 | 51.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25290-PA | 275 | GK25290-PA | 1..275 | 1..252 | 640 | 53.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15698-PA | 258 | GE15698-PA | 1..258 | 1..252 | 1108 | 83.4 | Plus |