BDGP Sequence Production Resources |
Search the DGRC for RE73577
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 735 |
Well: | 77 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14014-RB |
Protein status: | RE73577.pep: gold |
Preliminary Size: | 987 |
Sequenced Size: | 1143 |
Gene | Date | Evidence |
---|---|---|
CG14014 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14014 | 2002-05-19 | Blastp of sequenced clone |
CG14014 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14014 | 2008-04-29 | Release 5.5 accounting |
CG14014 | 2008-08-15 | Release 5.9 accounting |
CG14014 | 2008-12-18 | 5.12 accounting |
1143 bp (1143 high quality bases) assembled on 2002-05-19
GenBank Submission: AY119156
> RE73577.complete ATCACTCACATTCCAACCGCCGATAGCCATGGCTCAGTCCACGAATTCCA AGAAGCTGATGATGTTCCGCACTCCCAACGAGGAGGAGGCCCTGAAGAAT CAGATCTTCATCTTTAACTCGCCCATTGACTACAAGGACCAGCAGCTGAT CGTGTACCAGAAACCAGGCATCCTCACCGGAGACAAGGACTACGGCTACT GCGTGGTGTACAAGCGAGATCACTACGTGCTCAATAACCCGCCCAACTTC AAGAGCCCCACGAAGAGGAGCTTCCTCAACGAATGCATCCGCCAGTTGTA TCTGATGAACGGCATGGGTCACAAGATGTACTGGAGGACTACAAGTGCAA TGGCGCTGAGTACACCCGGCGAAGTGTGGCACCAGGTGAACAGTTGCCTG CTCCCAGAACGACTGACGCCGCAAAAGGAGAGCCTGAAGCGGGTGAAGAG GCAACTTTTCCGGGATCCACGGGCAGATCGCAAGAATCCCAACCCACTCA AAGGCAAATGCTGGGGCACCCAAGTCTTCTGCTTCAAATCGATGCGCGAG AAGATTGGCAGGAAGTACATCCGCCGGGGCTATCTGACCATCGCACGCCG CGAAGCCCTGCAGGAGATGATCCGTGAGCACTTGGCACGAGAAATGGTCT GCACTCCGGCCGCATGCAGAACGGTAATCAGCGCCTCCGACGGAATCTTC AATGTGAATGCCGGTGTCATCGGCGACATCTGTAGCTACCACAGCCACGC GGCTCGCCATCAGCCCGTCGTGGAGCGCCGTCTGACGGCCGGCGAAGCAC GTCTCCGGAACAACGAGGCCTGTCGCCTGACTCAGCGGGCCAAGCGGCTG GAGGCCATGTTCATACACGAACAAGTGCGACGGGCCGTCCAGAACCACCA GCTCATTCTGGAGGAGTCGGTGCGATCCATCTACTATGCCAAGGAGCTCT TCCGCCTTATCGAGGATCACGAGGAGTTCGTCTACACGGACAACAAGATC CTGTCTAGAATCTGACGGACCCTTCTTGAATGGCATAGCCACCACTTTTA TACCCCTTATAGTGTACACATATTTGTAATTATAGAACATTTAGATAATA AAATGGAAACCACAAAATTATACAGTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14014-RB | 1129 | CG14014-RB | 1..1129 | 1..1129 | 5645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5548807..5549933 | 1127..1 | 5635 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5549707..5550835 | 1129..1 | 5645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5549707..5550835 | 1129..1 | 5645 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5548807..5549933 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..987 | 29..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..987 | 29..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..987 | 29..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..987 | 29..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..987 | 29..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14014-RB | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5549709..5550835 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5549709..5550835 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5549709..5550835 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5549709..5550835 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5549709..5550835 | 1..1127 | 100 | Minus |
Translation from 0 to 1014
> RE73577.hyp SLTFQPPIAMAQSTNSKKLMMFRTPNEEEALKNQIFIFNSPIDYKDQQLI VYQKPGILTGDKDYGYCVVYKRDHYVLNNPPNFKSPTKRSFLNECIRQLY LMNGMGHKMYWRTTSAMALSTPGEVWHQVNSCLLPERLTPQKESLKRVKR QLFRDPRADRKNPNPLKGKCWGTQVFCFKSMREKIGRKYIRRGYLTIARR EALQEMIREHLAREMVCTPAACRTVISASDGIFNVNAGVIGDICSYHSHA ARHQPVVERRLTAGEARLRNNEACRLTQRAKRLEAMFIHEQVRRAVQNHQ LILEESVRSIYYAKELFRLIEDHEEFVYTDNKILSRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14014-PB | 328 | CG14014-PB | 1..328 | 10..337 | 1732 | 100 | Plus |
Translation from 1 to 1014
> RE73577.pep SLTFQPPIAMAQSTNSKKLMMFRTPNEEEALKNQIFIFNSPIDYKDQQLI VYQKPGILTGDKDYGYCVVYKRDHYVLNNPPNFKSPTKRSFLNECIRQLY LMNGMGHKMYWRTTSAMALSTPGEVWHQVNSCLLPERLTPQKESLKRVKR QLFRDPRADRKNPNPLKGKCWGTQVFCFKSMREKIGRKYIRRGYLTIARR EALQEMIREHLAREMVCTPAACRTVISASDGIFNVNAGVIGDICSYHSHA ARHQPVVERRLTAGEARLRNNEACRLTQRAKRLEAMFIHEQVRRAVQNHQ LILEESVRSIYYAKELFRLIEDHEEFVYTDNKILSRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14746-PA | 331 | GF14746-PA | 1..330 | 10..336 | 1434 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24296-PA | 328 | GG24296-PA | 1..328 | 10..337 | 1722 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11447-PA | 326 | GH11447-PA | 7..323 | 13..336 | 1158 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14014-PB | 328 | CG14014-PB | 1..328 | 10..337 | 1732 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21898-PA | 322 | GI21898-PA | 6..319 | 16..336 | 1139 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25898-PA | 323 | GL25898-PA | 6..322 | 16..336 | 1323 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12698-PA | 323 | GA12698-PA | 6..322 | 16..336 | 1324 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18013-PA | 328 | GM18013-PA | 1..328 | 10..337 | 1771 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22647-PA | 236 | GD22647-PA | 1..236 | 102..337 | 1269 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17816-PA | 335 | GJ17816-PA | 6..332 | 1..336 | 1172 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21056-PA | 324 | GK21056-PA | 3..323 | 11..336 | 1177 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18992-PA | 328 | GE18992-PA | 1..327 | 10..336 | 1726 | 96.9 | Plus |