BDGP Sequence Production Resources |
Search the DGRC for RE73673
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 736 |
Well: | 73 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5828-RA |
Protein status: | RE73673.pep: gold |
Preliminary Size: | 1113 |
Sequenced Size: | 1435 |
Gene | Date | Evidence |
---|---|---|
CG5828 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5828 | 2002-06-11 | Blastp of sequenced clone |
CG5828 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5828 | 2008-04-29 | Release 5.5 accounting |
CG5828 | 2008-08-15 | Release 5.9 accounting |
CG5828 | 2008-12-18 | 5.12 accounting |
1435 bp (1435 high quality bases) assembled on 2002-06-11
GenBank Submission: AY121699
> RE73673.complete ACCGGCCATAATAAAAGAAAAACTTAGAAAAACGGCGATTAATTCAGCGC TGAAAATCATACGCCTCGCGTCTATCCGCGTCGCAATGTACAGTAGCAGC TTGCTGCCGGATCCGGCTGTCTATCAGCCGGACACCCTGGACCTGAACAC GGATGGAAAGGCGGCGGATTACTGGTTCAACTGCTTCCGCGACATGGTGG CCAAGTTCGCGAAGGTGGCGGCCAAGTCACAGGAGGAGGATCACACGGCC ACCCAGCGGGCGGAGCAGTTCCAGGCGGCGTATCTGCAGCGGCTGGAGGA GCACCAGCGTAATGTGCCAGTCAACAAGGGCAAGGTGATTCTAGGCACCA GTGAGCTTCTCAAGCTAAACGAAACCCTGTTGCGCCGCTACGGATTTACA GATCCCTGGCTGAGACAAAAGAGGCTGGAAAATGCATCGGCTGTTGCCCG CCTGAAGCAGCGTCTGCAGGAATTGGATGCCCTGGCGGATGAGGACACAA GGTGGACGGAGCTGGTACGCGGTGTCCTCGCCGGCAACATGTTTGACTGG GGCGCACAGGCCATATCTAACATACTGGAGCAGGACAGCAATTTCGGACT TCATTCAGCCCTGGATCGCATTGAGAAGCGACCCTGGTTGCTTGACAACC TGGACAGCTGGTTGAATCGCCTCAAGGGCGAGCCACACAAGTGCGCCGTG GTCTTTGTGGACAACAGCGGCGTGGATGTGGTTCTGGGTGTGCTTCCCTT TGTCCGTGGACTGCTGAAACGTGGCACCAAGGTGCTGCTCTGCGCCAACA GTGAACCTGCTCTAAATGATGTGACCAGCGAGGAGCTGAAATCCTTGCTG GACGACTGCTCGCGCGAGTGTGAGGTCCTGGAGCAGGCCTGGTCAAAGGG ACAACTACTGGTCTATGCAAATGGACAGACTGGTCCCTGCCTGGATATGC GCACTCTCCCCAAGGAGCTGTGCGACGCCATCGCCGCCAATGAGACTGAC CTGCTTGTGATTGAGGGCATGGGACGCGCCCTGCACACAAATCTGAATGC CCGCTTCGGCTGCGAGACCCTCAAGTTGGCCGTGATAAAAAACAAATGGC TGGCCAAGTACCTGGGCGGCGAGGATATGTTCGCCGTCGTCTGCAAGTTC GAACCGGCTGCGCCCAGCTAGTCCAGGAGCCACTACGTTCATTGTTATCC CTTGTTGACAAACAAACGATATCCCCGGTCCTTGTTCAGTTTGAAATCAT TGTTACCGCCACCCAAAACCCACAACCCCCTAAACAATCCCATCCCTCAA TCTACCGATGAGATTCATATGTGTATAAATGTAATCTTAATGCAAGTGCT TTCGTGGTCACCCCACCCATATAACCGCAAAAAAACTTTTAATAATTAAA AACAAGAATATATAATAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5828-RA | 1419 | CG5828-RA | 1..1419 | 1..1419 | 7080 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5093121..5094539 | 1..1419 | 7080 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5094021..5095442 | 1..1422 | 7095 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5094021..5095442 | 1..1422 | 7095 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5093121..5094539 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1086 | 86..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1086 | 86..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1086 | 86..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1086 | 86..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1086 | 86..1171 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1419 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1419 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 10..1428 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 1..1419 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5828-RA | 10..1428 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5094021..5095439 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5094021..5095439 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5094021..5095439 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5094021..5095439 | 1..1419 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5094021..5095439 | 1..1419 | 99 | Plus |
Translation from 0 to 1170
> RE73673.hyp PAIIKEKLRKTAINSALKIIRLASIRVAMYSSSLLPDPAVYQPDTLDLNT DGKAADYWFNCFRDMVAKFAKVAAKSQEEDHTATQRAEQFQAAYLQRLEE HQRNVPVNKGKVILGTSELLKLNETLLRRYGFTDPWLRQKRLENASAVAR LKQRLQELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILEQDSNFGL HSALDRIEKRPWLLDNLDSWLNRLKGEPHKCAVVFVDNSGVDVVLGVLPF VRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCSRECEVLEQAWSKG QLLVYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNA RFGCETLKLAVIKNKWLAKYLGGEDMFAVVCKFEPAAPS*
Translation from 85 to 1170
> RE73673.pep MYSSSLLPDPAVYQPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQE EDHTATQRAEQFQAAYLQRLEEHQRNVPVNKGKVILGTSELLKLNETLLR RYGFTDPWLRQKRLENASAVARLKQRLQELDALADEDTRWTELVRGVLAG NMFDWGAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLNRLKGEP HKCAVVFVDNSGVDVVLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEE LKSLLDDCSRECEVLEQAWSKGQLLVYANGQTGPCLDMRTLPKELCDAIA ANETDLLVIEGMGRALHTNLNARFGCETLKLAVIKNKWLAKYLGGEDMFA VVCKFEPAAPS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14376-PA | 361 | GF14376-PA | 1..360 | 1..359 | 1608 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25052-PA | 361 | GG25052-PA | 1..361 | 1..361 | 1859 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11492-PA | 370 | GH11492-PA | 1..367 | 1..356 | 1382 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5828-PB | 361 | CG5828-PB | 1..361 | 1..361 | 1885 | 100 | Plus |
CG5828-PA | 361 | CG5828-PA | 1..361 | 1..361 | 1885 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16988-PA | 359 | GI16988-PA | 1..357 | 1..356 | 1522 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18804-PA | 363 | GL18804-PA | 1..360 | 1..356 | 1523 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19161-PA | 363 | GA19161-PA | 1..360 | 1..356 | 1521 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18528-PA | 361 | GM18528-PA | 1..361 | 1..361 | 1866 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23321-PA | 361 | GD23321-PA | 1..361 | 1..361 | 1872 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24127-PA | 362 | GJ24127-PA | 1..360 | 1..356 | 1518 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23730-PA | 360 | GK23730-PA | 1..357 | 1..356 | 1506 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11338-PA | 361 | GE11338-PA | 1..361 | 1..361 | 1856 | 96.4 | Plus |