BDGP Sequence Production Resources |
Search the DGRC for RE73905
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 739 |
Well: | 5 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17600-RB |
Protein status: | RE73905.pep: gold |
Preliminary Size: | 818 |
Sequenced Size: | 1031 |
Gene | Date | Evidence |
---|---|---|
CG17600 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17600 | 2002-06-11 | Blastp of sequenced clone |
CG17600 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17600 | 2008-04-29 | Release 5.5 accounting |
CG17600 | 2008-08-15 | Release 5.9 accounting |
CG17600 | 2008-12-18 | 5.12 accounting |
1031 bp (1031 high quality bases) assembled on 2002-06-11
GenBank Submission: AY071657
> RE73905.complete GTTTGCATTTTTATACCCATTTTAATATAATAAAAAAAATCTATAAATGG GAGTTTGATTTAGACGCAAAGGATATTTATCGTTTCGGTCGGAACATAGT GAGCTTCGCGACGTGATTATCAAGTCGAATGCTTCGGGAATCGCTCTGGA CCAACAGAAGGTGGACCAGTACATCAAGGCGATGTCTCTGAATGGCAGTG AAAAGGTGAACACCGAGAAGCTAGCGGCTATGTGGATGTATGCCACCCAG ATGGGAAGCCTGCCGCCAACAGTCCGCAAACTGACGCCTCCATCGCGGCA GATCATGCTCATTCCCTCCACCGCTGGCAATGGGATGGCACCACCACCGC CCACACGCTTGCCACCTCCGCCTCCGGGCGCCAGAGCTGGACTTCTGCTT CCCGTGCCCCCGCTGCCGGCGCAGTACCGTGGAATGACCCTTCCCTACAT GCGACCTGGGCCCGGATCCGTGACCTACGCCCACCCGGCTAGCCTAAGCG GGACATACCGGACTCACAAGAGCACAAAGTCAGCGGAGATCAATGGGCAG CGAAGACGGCGGCGGGCGGGAAAGTCTGATGCCAATCGCCGGCAGCGCCG AAAATCGGAAGCGGATGTCCTGGACGGTGCTCCCAATTTCCAGTATACGG GTCTAGATCGAGCCATAGCTGATAGCTTTTTGGCCAGGCAAGAACAGTCA CAGGCGGGCAGTCACGTCGACTATTCGTCGTCTGCCTCCTCGGACTTGTA CGGCGGTCAGAGGGCATCCTTCAAAACGAAGATCGTTTGCCGGGATGTGG TGATGTGACGGGAAAAGCATCCGCTCTCTAGTTCCCAGTTTCCCAGACTT TTGTATATATTTTTTTTACGGAGCCACAACGAAATCCCATCTATGTGGGG CTTTGTCTGATAAATTACCCCTTTTATATCCATTACTCTATCAATGTACT TACATATGCGTATAGCTCTTAAGACACATTAAAATTAATCGAATAAAGAT ATATTAAGCAAACGAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17600-RB | 1016 | CG17600-RB | 3..1015 | 1..1013 | 5065 | 100 | Plus |
CG17600.a | 996 | CG17600.a | 69..995 | 87..1013 | 4635 | 100 | Plus |
CG17600.c | 1127 | CG17600.c | 316..1126 | 203..1013 | 4055 | 100 | Plus |
CG17600.c | 1127 | CG17600.c | 192..311 | 88..207 | 600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 21937310..21937989 | 334..1013 | 3400 | 100 | Plus |
chrX | 22417052 | chrX | 21936904..21937034 | 204..334 | 655 | 100 | Plus |
chrX | 22417052 | chrX | 21936725..21936845 | 87..207 | 605 | 100 | Plus |
chrX | 22417052 | chrX | 21936464..21936552 | 1..89 | 445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 22541344..22542023 | 334..1013 | 3400 | 100 | Plus |
X | 23542271 | X | 22540938..22541068 | 204..334 | 655 | 100 | Plus |
X | 23542271 | X | 22540759..22540879 | 87..207 | 605 | 100 | Plus |
X | 23542271 | X | 22540498..22540586 | 1..89 | 445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 22526436..22527115 | 334..1013 | 3400 | 100 | Plus |
X | 23527363 | X | 22526030..22526160 | 204..334 | 655 | 100 | Plus |
X | 23527363 | X | 22525851..22525971 | 87..207 | 605 | 100 | Plus |
X | 23527363 | X | 22525590..22525678 | 1..89 | 445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 21936726..21936843 | 88..205 | 100 | -> | Plus |
chrX | 21936906..21937034 | 206..334 | 100 | -> | Plus |
chrX | 21937311..21937989 | 335..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1083..1803 | 88..808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1083..1803 | 88..808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1083..1803 | 88..808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1083..1803 | 88..808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RA | 1083..1803 | 88..808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RB | 1..1013 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RB | 1..1013 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RB | 56..1068 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RB | 1..1013 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17600-RB | 56..1068 | 1..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22540760..22540877 | 88..205 | 100 | -> | Plus |
X | 22540940..22541068 | 206..334 | 100 | -> | Plus |
X | 22540498..22540584 | 1..87 | 100 | -> | Plus |
X | 22541345..22542023 | 335..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22540760..22540877 | 88..205 | 100 | -> | Plus |
X | 22540940..22541068 | 206..334 | 100 | -> | Plus |
X | 22540498..22540584 | 1..87 | 100 | -> | Plus |
X | 22541345..22542023 | 335..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22540760..22540877 | 88..205 | 100 | -> | Plus |
X | 22540940..22541068 | 206..334 | 100 | -> | Plus |
X | 22540498..22540584 | 1..87 | 100 | -> | Plus |
X | 22541345..22542023 | 335..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 21942596..21942713 | 88..205 | 100 | -> | Plus |
arm_X | 21942776..21942904 | 206..334 | 100 | -> | Plus |
arm_X | 21942334..21942420 | 1..87 | 100 | -> | Plus |
arm_X | 21943181..21943859 | 335..1014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 22526437..22527115 | 335..1014 | 99 | Plus | |
X | 22525590..22525676 | 1..87 | 100 | -> | Plus |
X | 22525852..22525969 | 88..205 | 100 | -> | Plus |
X | 22526032..22526160 | 206..334 | 100 | -> | Plus |
Translation from 181 to 807
> RE73905.pep MSLNGSEKVNTEKLAAMWMYATQMGSLPPTVRKLTPPSRQIMLIPSTAGN GMAPPPPTRLPPPPPGARAGLLLPVPPLPAQYRGMTLPYMRPGPGSVTYA HPASLSGTYRTHKSTKSAEINGQRRRRRAGKSDANRRQRRKSEADVLDGA PNFQYTGLDRAIADSFLARQEQSQAGSHVDYSSSASSDLYGGQRASFKTK IVCRDVVM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21005-PA | 257 | GF21005-PA | 45..257 | 1..208 | 811 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19751-PA | 261 | GG19751-PA | 57..261 | 1..208 | 1028 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24078-PA | 221 | GH24078-PA | 1..221 | 1..208 | 601 | 67.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17600-PC | 208 | CG17600-PC | 1..208 | 1..208 | 1083 | 100 | Plus |
CG17600-PB | 208 | CG17600-PB | 1..208 | 1..208 | 1083 | 100 | Plus |
CG17600-PA | 600 | CG17600-PA | 393..600 | 1..208 | 1083 | 100 | Plus |
CG17600-PD | 603 | CG17600-PD | 393..603 | 1..208 | 1069 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14476-PA | 256 | GI14476-PA | 59..256 | 2..208 | 492 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13303-PA | 244 | GL13303-PA | 36..244 | 1..208 | 861 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22829-PA | 248 | GA22829-PA | 40..248 | 1..208 | 860 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11737-PA | 238 | GM11737-PA | 35..238 | 1..208 | 862 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17551-PA | 261 | GD17551-PA | 42..245 | 1..208 | 818 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18813-PA | 250 | GJ18813-PA | 38..250 | 1..208 | 777 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25775-PA | 221 | GK25775-PA | 1..221 | 1..208 | 666 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17945-PA | 240 | GE17945-PA | 35..240 | 1..208 | 882 | 93.8 | Plus |
Translation from 181 to 807
> RE73905.hyp MSLNGSEKVNTEKLAAMWMYATQMGSLPPTVRKLTPPSRQIMLIPSTAGN GMAPPPPTRLPPPPPGARAGLLLPVPPLPAQYRGMTLPYMRPGPGSVTYA HPASLSGTYRTHKSTKSAEINGQRRRRRAGKSDANRRQRRKSEADVLDGA PNFQYTGLDRAIADSFLARQEQSQAGSHVDYSSSASSDLYGGQRASFKTK IVCRDVVM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17600-PC | 208 | CG17600-PC | 1..208 | 1..208 | 1083 | 100 | Plus |
CG17600-PB | 208 | CG17600-PB | 1..208 | 1..208 | 1083 | 100 | Plus |
CG17600-PA | 600 | CG17600-PA | 393..600 | 1..208 | 1083 | 100 | Plus |
CG17600-PD | 603 | CG17600-PD | 393..603 | 1..208 | 1069 | 98.6 | Plus |