BDGP Sequence Production Resources |
Search the DGRC for RE73943
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 739 |
Well: | 43 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11905-RB |
Protein status: | RE73943.pep: gold |
Preliminary Size: | 3616 |
Sequenced Size: | 1505 |
Gene | Date | Evidence |
---|---|---|
CG11905 | 2002-11-03 | Blastp of sequenced clone |
CG11905 | 2008-04-29 | Release 5.5 accounting |
CG11905 | 2008-08-15 | Release 5.9 accounting |
CG11905 | 2008-12-18 | 5.12 accounting |
1505 bp (1505 high quality bases) assembled on 2002-11-03
GenBank Submission: BT001743
> RE73943.complete AGTTCATCTTCAGACGTCGCCTGGCTCGCTGGCTCTTGGTTCTTGTTCAA GGATATATTGTCAAGGCGAGGATTGGTCAACGCCACGAACACCAAGCATT TATTGAAAAATCTGAAACTATTCACCAGAACCTCGCGTTAAAATGCGCTT TCTTGTTCTCTCAACACTGCTTCTGGCCTCTTTGGCACTTGGCCAGGCTC AACAGCACGGTGGGCTGGCCGTCGAACACAGATCGAGGTCGGCTCCGCTG GTCTTCGAGGAGCATCCTTACTACGGAGGATTGAGGGGTCAGCTTCTCCA GCTGCGTCCGCAGCGGGACGGCAGTGTGGGCAGCTTCATCCTGCAGCGCC AACAGCCGCAGTTGAGGGCTGTACCTAGAGACTCCGATGACACCATCACC ATTTCGGCCGCAAGCATCTCGGCGGTAGCTGATGCTAGTGGAGCTTCTAG CTCCAGCAGCTCGATCTCAGCCAGCGCCAGTGATTTCAATCGGATTCAGT CGGCCGCCGCTCGGTTGGTTGCCATTCAGGAGTTGGCCAAGCGCAAGGGT TCCTTCAGTGAGGAGGACAACAAGATCTATGCCAGCAGCTTACTGGAACT GGGCCAGGCTGCCCAGAGTTTGGCCATGCTCCAGCAAAGCGGACAGATTA AGGACTTTAGTGTTCTGCTGCAGCCGGACATGTTTGGCAATCCTCAAAAG CAGCCAGCCAATTTCGGGCTAGAGGCCACCAACAATCCGGCGGACCAGAA GATCGACGAACAGAAACTGGACGAGGTCACTGAGCAACAATTCTCGCCGG ATGAGCAGTTCCTGCCCCCCAACAACGAGGATCCCTATGAGGATGTTAAC GATAGTGTGTCCGTAATGGCTCCTAAGAAAGATGCCGCCGTGGCTGAGGC AAAACCAGTGGGTCTTTCGATTGCCGGTGAAGGTGGCGTGGCCTCCTCAA AACCGAACGCTGTGGCTCTCTCCGGCCGGAATGGATTGGCCGTAGCTTCG CCCAAGGCCACAGCCATTGCTGGAGTTTCTCCCGAGGAGGCAGCTGCCTT CAGCATTTCATTGCCCACTCGCAATCAACTGGTGATCAAGAGTCCCAATT TGGCTTCGGAGAAGGCTAGCGAAGACTATGACTATAATGATGTACCGCTG ACGGTTGCCCGCTTTCCTCTGACCCGGGAAACTCCTCAGCAATTGGTCCC GGTTCGCATCTCTGGAGGGGATTCCCTTGTGGAAAGGTGGCGCACCGCCA TCGCAGAGGATTATGCAGCCAGGCAGGCGCTGACCAAGGTGGCCATGCCG CATCCCACACCCTTCATCCGCATGGCTCCCAAACTGCGTCTTCACTCCGA ATAGAAAAAGTGCTGTAGGATTGGATGAACGAGATTAAAATTGGATTGGA CTTGATCGCAATGAGATTCATACTTTACTTTAAGCAACATATTGTGTGCC AGCTCCCAGATTGCCAATAAAATATGTCTATTTAAATAGAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11905-RB | 1643 | CG11905-RB | 111..1598 | 1..1488 | 7425 | 99.9 | Plus |
CG11905.a | 1522 | CG11905.a | 77..1519 | 46..1488 | 7200 | 99.9 | Plus |
CG11905-RI | 1656 | CG11905-RI | 169..1611 | 46..1488 | 7200 | 99.9 | Plus |
CG11905.a | 1522 | CG11905.a | 1..45 | 1..45 | 225 | 100 | Plus |
CG11905-RI | 1656 | CG11905-RI | 1..45 | 1..45 | 225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16918461..16919148 | 913..226 | 3335 | 99 | Minus |
chr3L | 24539361 | chr3L | 16917821..16918398 | 1488..911 | 2875 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 16924645..16924757 | 157..45 | 550 | 99.1 | Minus |
chr3L | 24539361 | chr3L | 16922748..16922815 | 225..158 | 325 | 98.5 | Minus |
chr3L | 24539361 | chr3L | 16924933..16924977 | 45..1 | 225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16929020..16929707 | 913..226 | 3440 | 100 | Minus |
3L | 28110227 | 3L | 16928380..16928957 | 1488..911 | 2890 | 100 | Minus |
3L | 28110227 | 3L | 16935194..16935306 | 157..45 | 565 | 100 | Minus |
3L | 28110227 | 3L | 16933293..16933360 | 225..158 | 325 | 98.5 | Minus |
3L | 28110227 | 3L | 16935488..16935532 | 45..1 | 225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16922120..16922807 | 913..226 | 3440 | 100 | Minus |
3L | 28103327 | 3L | 16921480..16922057 | 1488..911 | 2890 | 100 | Minus |
3L | 28103327 | 3L | 16928294..16928406 | 157..45 | 565 | 100 | Minus |
3L | 28103327 | 3L | 16926393..16926460 | 225..158 | 325 | 98.5 | Minus |
3L | 28103327 | 3L | 16928588..16928632 | 45..1 | 225 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16917820..16918397 | 912..1489 | 99 | <- | Minus |
chr3L | 16918463..16919148 | 226..911 | 98 | <- | Minus |
chr3L | 16922748..16922815 | 158..225 | 98 | <- | Minus |
chr3L | 16924645..16924756 | 46..157 | 99 | <- | Minus |
chr3L | 16924933..16924977 | 1..45 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RI | 1..1212 | 143..1354 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RI | 1..1212 | 143..1354 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 1..1212 | 143..1354 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RI | 1..1212 | 143..1354 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 1..1212 | 143..1354 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 1..1488 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 1..1488 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 5..1491 | 1..1487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 1..1488 | 1..1489 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RB | 5..1491 | 1..1487 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16935194..16935305 | 46..157 | 100 | <- | Minus |
3L | 16935488..16935532 | 1..45 | 100 | Minus | |
3L | 16928379..16928956 | 912..1489 | 99 | <- | Minus |
3L | 16929022..16929707 | 226..911 | 100 | <- | Minus |
3L | 16933293..16933360 | 158..225 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16935194..16935305 | 46..157 | 100 | <- | Minus |
3L | 16935488..16935532 | 1..45 | 100 | Minus | |
3L | 16928379..16928956 | 912..1489 | 99 | <- | Minus |
3L | 16929022..16929707 | 226..911 | 100 | <- | Minus |
3L | 16933293..16933360 | 158..225 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16935194..16935305 | 46..157 | 100 | <- | Minus |
3L | 16935488..16935532 | 1..45 | 100 | Minus | |
3L | 16928379..16928956 | 912..1489 | 99 | <- | Minus |
3L | 16929022..16929707 | 226..911 | 100 | <- | Minus |
3L | 16933293..16933360 | 158..225 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16921479..16922056 | 912..1489 | 99 | <- | Minus |
arm_3L | 16922122..16922807 | 226..911 | 100 | <- | Minus |
arm_3L | 16926393..16926460 | 158..225 | 98 | <- | Minus |
arm_3L | 16928294..16928405 | 46..157 | 100 | <- | Minus |
arm_3L | 16928588..16928632 | 1..45 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16921479..16922056 | 912..1489 | 99 | <- | Minus |
3L | 16922122..16922807 | 226..911 | 100 | <- | Minus |
3L | 16926393..16926460 | 158..225 | 98 | <- | Minus |
3L | 16928294..16928405 | 46..157 | 100 | <- | Minus |
3L | 16928588..16928632 | 1..45 | 100 | Minus |
Translation from 142 to 1353
> RE73943.pep MRFLVLSTLLLASLALGQAQQHGGLAVEHRSRSAPLVFEEHPYYGGLRGQ LLQLRPQRDGSVGSFILQRQQPQLRAVPRDSDDTITISAASISAVADASG ASSSSSSISASASDFNRIQSAAARLVAIQELAKRKGSFSEEDNKIYASSL LELGQAAQSLAMLQQSGQIKDFSVLLQPDMFGNPQKQPANFGLEATNNPA DQKIDEQKLDEVTEQQFSPDEQFLPPNNEDPYEDVNDSVSVMAPKKDAAV AEAKPVGLSIAGEGGVASSKPNAVALSGRNGLAVASPKATAIAGVSPEEA AAFSISLPTRNQLVIKSPNLASEKASEDYDYNDVPLTVARFPLTRETPQQ LVPVRISGGDSLVERWRTAIAEDYAARQALTKVAMPHPTPFIRMAPKLRL HSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10496-PA | 649 | GF10496-PA | 264..649 | 17..403 | 1652 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15844-PA | 380 | GG15844-PA | 7..380 | 29..403 | 1889 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15132-PA | 372 | GH15132-PA | 8..370 | 33..401 | 1307 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11905-PI | 403 | CG11905-PI | 1..403 | 1..403 | 1998 | 100 | Plus |
CG11905-PF | 403 | CG11905-PF | 1..403 | 1..403 | 1998 | 100 | Plus |
CG11905-PB | 403 | CG11905-PB | 1..403 | 1..403 | 1998 | 100 | Plus |
CG11905-PL | 404 | CG11905-PL | 1..404 | 1..403 | 1983 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12070-PA | 365 | GI12070-PA | 11..365 | 29..403 | 1205 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20696-PA | 561 | GL20696-PA | 9..382 | 29..397 | 1443 | 83.6 | Plus |
Dper\GL20696-PA | 561 | GL20696-PA | 392..513 | 257..380 | 538 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28286-PA | 383 | GA28286-PA | 4..383 | 29..403 | 1470 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24360-PA | 369 | GM24360-PA | 12..369 | 26..403 | 1797 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12436-PA | 1315 | GD12436-PA | 941..1315 | 29..403 | 1929 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13339-PA | 649 | GJ13339-PA | 300..649 | 31..403 | 1137 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17153-PA | 371 | GK17153-PA | 3..371 | 28..403 | 1437 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22183-PA | 390 | GE22183-PA | 16..390 | 29..403 | 1801 | 96 | Plus |
Translation from 142 to 1353
> RE73943.hyp MRFLVLSTLLLASLALGQAQQHGGLAVEHRSRSAPLVFEEHPYYGGLRGQ LLQLRPQRDGSVGSFILQRQQPQLRAVPRDSDDTITISAASISAVADASG ASSSSSSISASASDFNRIQSAAARLVAIQELAKRKGSFSEEDNKIYASSL LELGQAAQSLAMLQQSGQIKDFSVLLQPDMFGNPQKQPANFGLEATNNPA DQKIDEQKLDEVTEQQFSPDEQFLPPNNEDPYEDVNDSVSVMAPKKDAAV AEAKPVGLSIAGEGGVASSKPNAVALSGRNGLAVASPKATAIAGVSPEEA AAFSISLPTRNQLVIKSPNLASEKASEDYDYNDVPLTVARFPLTRETPQQ LVPVRISGGDSLVERWRTAIAEDYAARQALTKVAMPHPTPFIRMAPKLRL HSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11905-PI | 403 | CG11905-PI | 1..403 | 1..403 | 1998 | 100 | Plus |
CG11905-PF | 403 | CG11905-PF | 1..403 | 1..403 | 1998 | 100 | Plus |
CG11905-PB | 403 | CG11905-PB | 1..403 | 1..403 | 1998 | 100 | Plus |
CG11905-PL | 404 | CG11905-PL | 1..404 | 1..403 | 1983 | 99.5 | Plus |