BDGP Sequence Production Resources |
Search the DGRC for RE74011
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 740 |
Well: | 11 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Flo2-RB |
Protein status: | RE74011.pep: gold |
Preliminary Size: | 324 |
Sequenced Size: | 2793 |
Gene | Date | Evidence |
---|---|---|
CG14409 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32593 | 2003-07-07 | Blastp of sequenced clone |
Flo-2 | 2008-04-29 | Release 5.5 accounting |
Flo-2 | 2008-08-15 | Release 5.9 accounting |
Flo-2 | 2008-12-18 | 5.12 accounting |
2793 bp (2793 high quality bases) assembled on 2003-07-07
GenBank Submission: BT009962
> RE74011.complete GGCGTTTTTCCATCTCCAGCGTAAAGGGACTCGGTTCTTAAGAACGAACT TTTCAGCGGAGCTTTCGGCAAAAGGAGTAAACAGCAAACAAATAAAACAT AAATAGAGACCAACAAGTAGACGGCGACGAGGAACGACTCAACGATGGGC AACATACACACGACGGGTCCCAATGAGGCGTTAATTGTTTCAGGTGGCTG CTGTGGATCGACCAAGAAGCGCACGATTGTGGGCGGCTGGGCGTGGGCGT GGTGGCTGGTAACCGATGTCCAGCGACTGTCCCTCAATGTGATGACCCTG AATCCGATGTGCGAGAATGTGGAAACGTCGCAAGGTGTTCCGCTAACGGT GACCGGAGTGGCTCAATGCAAGATCATGAAGGCCGACGAGCTTCTAGGCA CTGCCAGCGAGCAATTCCTTGGAAAGAGCGTCAAGGAGATCAAGCAGACG ATCCTGCAAACCCTCGAAGGACATTTGAGAGCCATATTGGGAACGCTTAC AGTAGAAGAGGTGTACAAGGACCGCGACCAATTCGCTGCCTTGGTGCGCG AGGTGGCCGCACCGGACGTGGGTCGTATGGGCATCGAGATTCTCTCGTTT ACGATCAAGGACGTCTACGATGATGTGCAGTACCTGGCCTCGTTGGGCAA GGCCCAGACCGCCGTGGTCAAGCGGGATGCAGATGCCGGCGTGGCGGAGG CCAATCGAGATGCCGGTATCCGTGAGGCGGAGTGCGAAAAGAGCGCCATG GATGTGAAATACTCGACGGACACGAAAATCGAGGACAACACCAGGATGTA CAAGCTGCAGAAGGCCAATTTCGATCAGGAGATCAACACGGCCAAGGCCG AATCGCAGTTGGCCTACGAGCTGCAGGCAGCCAAGATCCGCCAGCGCATC CGTAACGAGGAGATTCAGATCGAGGTGGTGGAGCGACGCAAGCAGATCGA GATTGAGTCGCAGGAAGTGCAGCGCAAGGATCGCGAGCTCACTGGCACAG TCAAGCTGCCCGCCGAGGCCGAGGCCTTCCGCCTCCAGACCCTTGCGCAG GCCAAGCAATGTCAGACCATCGAGGGTGCCCGTGCCGAGGCGGAGCGCAT ACGCAAGATCGGATCGGCGGAGGCCCATGCCATCGAGTTGGTGGGCAAGG CGGAGGCGGAACGCATGCGGATGAAGGCCCATGTGTACAAGCAGTACGGC GATGCAGCAATTATGAATATTGTACTCGAATCGCTGCCCAAGATTGCCGC TGAGGTGGCTGCACCACTGGCCAAAACCGATGAGATTGTCCTAATTGGCG GCAACGATAATATAACCAACGATGTGACTCGCTTGGTGGCCCAGCTACCG CCATCGATCAACGCCTTGACCGGAGTGGATTTGTCCAAGGTTCTGTCCAA GATACCGGGGGCCAAGGCGTGAAACCTAATGGAATGGGATATCCAGGAAA TGGCAATGACAACGTAACGCAGCGTAAAGGAATTGTAACCGATACAAAAA CCAGATAAGGATAGACAACCGAATTAAGAAGAGACGACAGGAAGCGACAA AATAAGATGGCGATAGTTTGCTAAAGAGGGGGCGTGCATTTGTTAGAGAG AGAAAGAGGGGAAACAGCGAAACGAACTTGAAAAACTCAAGTTTCGAAAT GAAATCGAACGTGTAGCTAAATGTACTCCGATATTATAATATATTTATAT ATAATATATATATATATATATCTATATATATATATCTATATATATATATT TGTATATTTATATGCACACATGCAATACACACATACACTTGTCTCGTCTG TGTGGTGTCCTAGTGTGTGTGTGTGATGTTTGGCGGCGTAACAATCAAAA ACAGAACACAAAAAACAACCAACGTTAATCTCAGCTAAAGTTATGCATTT CGAACGCAACATTTTGTGGCCTTTTCTCTCGAAAACGAAAAACCGATAAC TATAACAAGAAATCAACGTGAAATTTGTATAACTTTAAAACGAAAACCAT TTAAGCAGAGTGTTAGCTATTTATTTACTATGCTATATATACTATATACA TGCAGACTTGCTATACACAAAGAGCTCTTTCAATAAACACATAGAATTAT ATAACAGACAGTGTTGTACAGCATATATGTATTATTTTACAGTGCTGTAG AGATCTGTATAAGTAGTCTCTCTCCATCTCCTTCTTATACAATTTCTATC TGCAACTAAAAACAAAAAAAAAAAAACAAACAAAAAGCTTACATACTTCC AGGCAAATTAAATTATACATTATTATTTTTTTAATACATAACTAACTATT TATTTGTTGATTCGTGCCTGTTTCTTTCGTTGAATTTTGTTAAACGATTA CTTTTTACGGAATTGTGCCATATAAGGTGCAAACATTTTATATTTGTTTA TTTTTGATTATTATACCAAATAATGCTTTGCTCGATCAATTTTATATCGC ATATTGCAAAATAGTCGTATATTACTTTACAACACTGTTTTTTCGACAAT TGGCGCTGCTTTACACCCCACACACACATTAACCAACACAAATGAGTTTG AATTTATGTATTATTCTCAGTGCGCAAGAAAAAAATTAAGCCTAATTTCT TGTTATACAAAGCGTTTATATAATCATGTTTGCCTCGTTTAATCATTTTT TTATGTTTATTATTTATGTAACAACACATATTGAACTACGAATATGCATT TAAAATTTTTGTACTTTATTCTTATACATTTTTTTTAGTTTATAGCAAAA GGAAAGAAAAAATAAAGAAAATAATTGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Flo-2.k | 3252 | Flo-2.k | 534..2938 | 380..2783 | 11910 | 99.8 | Plus |
Flo-2.m | 3194 | Flo-2.m | 468..2872 | 380..2783 | 11910 | 99.8 | Plus |
Flo-2.i | 3203 | Flo-2.i | 477..2881 | 380..2783 | 11910 | 99.8 | Plus |
Flo-2.m | 3194 | Flo-2.m | 59..439 | 1..381 | 1905 | 100 | Plus |
Flo-2.i | 3203 | Flo-2.i | 59..439 | 1..381 | 1905 | 100 | Plus |
Flo-2.k | 3252 | Flo-2.k | 162..496 | 47..381 | 1675 | 100 | Plus |
Flo-2.k | 3252 | Flo-2.k | 4..49 | 1..46 | 230 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 14822262..14823799 | 1241..2777 | 7530 | 99.7 | Plus |
chrX | 22417052 | chrX | 14820962..14821530 | 490..1058 | 2845 | 100 | Plus |
chrX | 22417052 | chrX | 14814435..14814629 | 188..382 | 975 | 100 | Plus |
chrX | 22417052 | chrX | 14822018..14822201 | 1059..1242 | 920 | 100 | Plus |
chrX | 22417052 | chrX | 14731108..14731258 | 46..196 | 755 | 100 | Plus |
chrX | 22417052 | chrX | 14816981..14817092 | 380..491 | 560 | 100 | Plus |
chrX | 22417052 | chrX | 14729614..14729659 | 1..46 | 230 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 14932046..14933589 | 1241..2783 | 7575 | 99.8 | Plus |
X | 23542271 | X | 14930746..14931314 | 490..1058 | 2845 | 100 | Plus |
X | 23542271 | X | 14924220..14924414 | 188..382 | 975 | 100 | Plus |
X | 23542271 | X | 14931802..14931985 | 1059..1242 | 920 | 100 | Plus |
X | 23542271 | X | 14840872..14841022 | 46..196 | 755 | 100 | Plus |
X | 23542271 | X | 14926764..14926875 | 380..491 | 560 | 100 | Plus |
X | 23542271 | X | 14839378..14839423 | 1..46 | 230 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 14940144..14941687 | 1241..2783 | 7605 | 99.8 | Plus |
X | 23527363 | X | 14938844..14939412 | 490..1058 | 2845 | 100 | Plus |
X | 23527363 | X | 14932318..14932512 | 188..382 | 975 | 100 | Plus |
X | 23527363 | X | 14939900..14940083 | 1059..1242 | 920 | 100 | Plus |
X | 23527363 | X | 14848970..14849120 | 46..196 | 755 | 100 | Plus |
X | 23527363 | X | 14934862..14934973 | 380..491 | 560 | 100 | Plus |
X | 23527363 | X | 14847476..14847521 | 1..46 | 230 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1059..1176 | 2643..2765 | 145 | 61.6 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1135..1277 | 2763..2624 | 131 | 56.6 | Minus |
F-element | 4708 | F-element F 4708bp | 4649..4703 | 2182..2236 | 131 | 70.9 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 1229..1391 | 2432..2274 | 122 | 58.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14729614..14729659 | 1..46 | 100 | -> | Plus |
chrX | 14731109..14731255 | 47..193 | 100 | -> | Plus |
chrX | 14814441..14814628 | 194..381 | 100 | -> | Plus |
chrX | 14816983..14817091 | 382..490 | 100 | -> | Plus |
chrX | 14820963..14821530 | 491..1058 | 100 | -> | Plus |
chrX | 14822018..14822201 | 1059..1242 | 100 | -> | Plus |
chrX | 14822264..14823799 | 1243..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RB | 1..1278 | 145..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RB | 1..1278 | 145..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RL | 1..1323 | 145..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RB | 1..1278 | 145..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo2-RL | 1..1323 | 145..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RB | 1..2778 | 1..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RB | 1..2778 | 1..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RL | 3..2780 | 1..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-2-RB | 1..2778 | 1..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo2-RL | 3..2780 | 1..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14924226..14924413 | 194..381 | 100 | -> | Plus |
X | 14926766..14926874 | 382..490 | 100 | -> | Plus |
X | 14931802..14931985 | 1059..1242 | 100 | -> | Plus |
X | 14839378..14839423 | 1..46 | 100 | -> | Plus |
X | 14840873..14841019 | 47..193 | 100 | -> | Plus |
X | 14930747..14931314 | 491..1058 | 100 | -> | Plus |
X | 14932048..14933583 | 1243..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14924226..14924413 | 194..381 | 100 | -> | Plus |
X | 14926766..14926874 | 382..490 | 100 | -> | Plus |
X | 14931802..14931985 | 1059..1242 | 100 | -> | Plus |
X | 14839378..14839423 | 1..46 | 100 | -> | Plus |
X | 14840873..14841019 | 47..193 | 100 | -> | Plus |
X | 14930747..14931314 | 491..1058 | 100 | -> | Plus |
X | 14932048..14933583 | 1243..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14924226..14924413 | 194..381 | 100 | -> | Plus |
X | 14926766..14926874 | 382..490 | 100 | -> | Plus |
X | 14931802..14931985 | 1059..1242 | 100 | -> | Plus |
X | 14839378..14839423 | 1..46 | 100 | -> | Plus |
X | 14840873..14841019 | 47..193 | 100 | -> | Plus |
X | 14930747..14931314 | 491..1058 | 100 | -> | Plus |
X | 14932048..14933583 | 1243..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14733411..14733456 | 1..46 | 100 | -> | Plus |
arm_X | 14734906..14735052 | 47..193 | 100 | -> | Plus |
arm_X | 14818259..14818446 | 194..381 | 100 | -> | Plus |
arm_X | 14820799..14820907 | 382..490 | 100 | -> | Plus |
arm_X | 14824780..14825347 | 491..1058 | 100 | -> | Plus |
arm_X | 14825835..14826018 | 1059..1242 | 100 | -> | Plus |
arm_X | 14826081..14827616 | 1243..2777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14938845..14939412 | 491..1058 | 100 | -> | Plus |
X | 14939900..14940083 | 1059..1242 | 100 | -> | Plus |
X | 14940146..14941681 | 1243..2777 | 99 | Plus | |
X | 14847476..14847521 | 1..46 | 100 | -> | Plus |
X | 14848971..14849117 | 47..193 | 100 | -> | Plus |
X | 14932324..14932511 | 194..381 | 100 | -> | Plus |
X | 14934864..14934972 | 382..490 | 100 | -> | Plus |
Translation from 144 to 1421
> RE74011.hyp MGNIHTTGPNEALIVSGGCCGSTKKRTIVGGWAWAWWLVTDVQRLSLNVM TLNPMCENVETSQGVPLTVTGVAQCKIMKADELLGTASEQFLGKSVKEIK QTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEIL SFTIKDVYDDVQYLASLGKAQTAVVKRDADAGVAEANRDAGIREAECEKS AMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAYELQAAKIRQ RIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTL AQAKQCQTIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQ YGDAAIMNIVLESLPKIAAEVAAPLAKTDEIVLIGGNDNITNDVTRLVAQ LPPSINALTGVDLSKVLSKIPGAKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Flo2-PB | 425 | CG32593-PB | 1..425 | 1..425 | 2120 | 100 | Plus |
Flo2-PF | 425 | CG32593-PF | 1..425 | 1..425 | 2120 | 100 | Plus |
Flo2-PL | 440 | CG32593-PL | 1..425 | 1..425 | 2120 | 100 | Plus |
Flo2-PI | 435 | CG32593-PI | 1..435 | 1..425 | 2099 | 97.7 | Plus |
Flo2-PA | 438 | CG32593-PA | 1..438 | 1..425 | 2096 | 97 | Plus |
Translation from 144 to 1421
> RE74011.pep MGNIHTTGPNEALIVSGGCCGSTKKRTIVGGWAWAWWLVTDVQRLSLNVM TLNPMCENVETSQGVPLTVTGVAQCKIMKADELLGTASEQFLGKSVKEIK QTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEIL SFTIKDVYDDVQYLASLGKAQTAVVKRDADAGVAEANRDAGIREAECEKS AMDVKYSTDTKIEDNTRMYKLQKANFDQEINTAKAESQLAYELQAAKIRQ RIRNEEIQIEVVERRKQIEIESQEVQRKDRELTGTVKLPAEAEAFRLQTL AQAKQCQTIEGARAEAERIRKIGSAEAHAIELVGKAEAERMRMKAHVYKQ YGDAAIMNIVLESLPKIAAEVAAPLAKTDEIVLIGGNDNITNDVTRLVAQ LPPSINALTGVDLSKVLSKIPGAKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19486-PA | 438 | GF19486-PA | 1..438 | 1..425 | 2183 | 95.4 | Plus |
Dana\GF22637-PA | 430 | GF22637-PA | 7..425 | 6..415 | 890 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17854-PA | 438 | GG17854-PA | 1..438 | 1..425 | 2218 | 97 | Plus |
Dere\GG22345-PA | 430 | GG22345-PA | 7..425 | 6..415 | 902 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12759-PA | 432 | GH12759-PA | 9..432 | 15..425 | 2065 | 93.2 | Plus |
Dgri\GH20287-PA | 430 | GH20287-PA | 7..425 | 6..415 | 889 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Flo2-PB | 425 | CG32593-PB | 1..425 | 1..425 | 2120 | 100 | Plus |
Flo2-PF | 425 | CG32593-PF | 1..425 | 1..425 | 2120 | 100 | Plus |
Flo2-PL | 440 | CG32593-PL | 1..425 | 1..425 | 2120 | 100 | Plus |
Flo2-PI | 435 | CG32593-PI | 1..435 | 1..425 | 2099 | 97.7 | Plus |
Flo2-PA | 438 | CG32593-PA | 1..438 | 1..425 | 2096 | 97 | Plus |
Flo2-PK | 438 | CG32593-PK | 1..438 | 1..425 | 2096 | 97 | Plus |
Flo2-PE | 438 | CG32593-PE | 1..438 | 1..425 | 2096 | 97 | Plus |
Flo2-PJ | 448 | CG32593-PJ | 1..448 | 1..425 | 2086 | 94.9 | Plus |
Flo2-PM | 356 | CG32593-PM | 10..356 | 79..425 | 1689 | 99.7 | Plus |
Flo2-PG | 340 | CG32593-PG | 22..340 | 103..425 | 1513 | 96.9 | Plus |
Flo2-PH | 281 | CG32593-PH | 1..281 | 145..425 | 1372 | 100 | Plus |
Flo2-PD | 281 | CG32593-PD | 1..281 | 145..425 | 1372 | 100 | Plus |
Flo1-PA | 426 | CG8200-PA | 7..421 | 6..415 | 961 | 48.7 | Plus |
Flo1-PB | 430 | CG8200-PB | 7..425 | 6..415 | 946 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15205-PA | 429 | GI15205-PA | 2..429 | 11..425 | 2077 | 93 | Plus |
Dmoj\GI19457-PA | 430 | GI19457-PA | 7..425 | 6..415 | 887 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27073-PA | 425 | GL27073-PA | 4..425 | 17..425 | 2106 | 95.5 | Plus |
Dper\GL11508-PA | 430 | GL11508-PA | 7..425 | 6..415 | 905 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23027-PA | 438 | GA23027-PA | 1..438 | 1..425 | 2194 | 95.7 | Plus |
Dpse\GA20892-PA | 430 | GA20892-PA | 7..425 | 6..415 | 905 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12049-PA | 438 | GM12049-PA | 1..438 | 1..425 | 2217 | 97 | Plus |
Dsec\GM20133-PA | 430 | GM20133-PA | 7..425 | 6..415 | 909 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\anon-381MEL-PA | 438 | GD17182-PA | 1..438 | 1..425 | 2217 | 97 | Plus |
Dsim\GD25610-PA | 430 | GD25610-PA | 7..425 | 6..415 | 909 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16615-PA | 356 | GJ16615-PA | 10..356 | 79..425 | 1752 | 97.1 | Plus |
Dvir\GJ21208-PA | 430 | GJ21208-PA | 7..425 | 6..415 | 886 | 47 | Plus |
Dvir\GJ14117-PA | 78 | GJ14117-PA | 1..31 | 50..80 | 156 | 87.1 | Plus |