BDGP Sequence Production Resources |
Search the DGRC for RE74146
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 741 |
Well: | 46 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5033-RB |
Protein status: | RE74146.pep: full length peptide match |
Preliminary Size: | 2507 |
Sequenced Size: | 2581 |
Gene | Date | Evidence |
---|---|---|
CG5033 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5033 | 2003-02-13 | Blastp of sequenced clone |
CG5033 | 2008-04-29 | Release 5.5 accounting |
CG5033 | 2008-08-15 | Release 5.9 accounting |
CG5033 | 2008-12-18 | 5.12 accounting |
2581 bp (2581 high quality bases) assembled on 2003-02-13
GenBank Submission: BT003755
> RE74146.complete ATCGCTGACTGCAACACGTGCGCCGCGTTAGTTTTGTTTTTACCTCAAAA TGACCAAAAAACTAGCTCTGAAACGCAGAGGAAAGGATTCGGAACCCACA AATGAAGTGGTGGCCAGTTCCGAGGCTTCCGAAAACGAGGAGGAGGAGGA GGTAAGACCCATTGACAGTGATATAAAAAGTCATTTCAAAATGACCTGCA TGTGTGTTTGTGCTCTTTAAGGACCTGCTGCAAGCTGTAAAAGATCCCGG CGAAGATTCAACAGATGACGAGGGCATAGACCAGGAATACCACTCGGATT CCAGTGAGGAACTGCAGTTCGAGAGCGATGAGGAGGGCAACTACTTGGGC AGAAAGCAATCTTCATCAGCTGAGGAAGATGAAGAAAGTAGTGATGAAGA GGATAATGAAGAGGAGGAAAGCACTGATGGAGAGGAAGTGGAAGATGAGG AGAAGGATTCCAAGTCAAAGCAAACAGACGATAAGCCCAGTGGAAGCGGT GCCGCGTCTAAAAAAGCCCTTACAGCAGAGCTCCCGAAACGGGATAGCTC GAAGCCTGAGTATCAGGATTCAGATACCTCCGACGAGGAGGACATAAGAA ATACTGTAGGCAACATACCCATGCACTGGTACGACGAATACAAGCACATC GGTTACGACTGGGATGCCAAGAAGATTATTAAACCACCACAAGGAGATCA AATTGATGAGTTCCTGCGTAAGATCGAGGACCCAGACTTTTGGCGTACCG TCAAGGATCCACTTACCGGTCAGGATGTGCGCCTAACAGACGAGGACATT GCTCTGATCAAGCGCATCGTTTCGGGTCGCATACCCAACAAGGATCACGA AGAGTATGAGCCCTGGATCGAATGGTTCACATCGGAGGTGGAAAAGATGC CCATCAAGAACGTACCCGACCACAAACGCTCTTTCCTGCCCTCAGTTTCC GAGAAAAAGCGCGTCTCTCGCATGGTGCACGCCCTCAAAATGGGCTGGAT GAAGACCACTGAGGAAGTGGAACGCGAGAAGCAGGCCAAGCGCGGTCCCA AGTTCTACATGCTGTGGGAAACGGACACCAGTCGGGAACACATGCGCCGC ATCCACGATCCAGTCTCTGCGCCCAAACGCGACCTTCCCGGTCATGCCGA GTCCTACAATCCACCGCCAGAGTATCTTTTCGATGCCAAGGAGACCAAGG AGTGGCTTAAACTAAAGGACGAGCCACACAAGCGCAAGCTGCACTTCATG CCACAGAAGTTCAAGTCGCTGAGGGAGGTGCCCGCATACTCGAGATACCT TCGGGAGCGTTTCCTTCGTTGCCTGGATCTTTACCTGTGTCCCCGTGCAA AGCGTGTCAAGCTGAACATCGATGCCGAGTACCTTATCCCCAAGTTGCCC TCGCCGCGTGACCTGCAACCCTTTCCCACGGTGGAGAGTATGGTTTACCG TGGCCACACCGATCTGGTGCGGTCTGTTAGTGTGGAGCCCAAGGGAGAGT ACCTCGTCTCCGGTTCGGATGATAAAACCGTCAAGATTTGGGAAATTGCA ACAGGTCGTTGCATTCGCACAATCGAGACCGACGAAGTGGTACGCTGTGT GGCTTGGTGTCCAAATCCCAAGCTGTCTATTATTGCGGTGGCCACTGGCA ATCGCTTGCTGCTCGTCAATCCTAAAGTGGGCGATAAGGTGCTGGTGAAG AAGACCGACGATCTCTTGGCTGAGGCGCCCAGTCAGGATGTCATTGAAAG TGAACGCATCAAGACGGCGGTGCAATGGTCAAATGCGGAAGCTGATGAGC AGGAGAAGGGCGTCCGCGTAGTGATTACCCACTTCAAACCCATCCGACAG GTGACCTGGCACGGTCGTGGTGACTACTTGGCCACAGTGATGCCCGAAGG TGCTAACCGCTCGGCTTTAATTCATCAGTTGTCCAAGCGGCGCTCACAGA TTCCATTCTCCAAGAGCAAGGGTCTCATCCAATTCGTGCTCTTCCATCCG GTGAAGCCCTGCTTCTTTGTGGCGACGCAACACAACATTCGCATTTATGA TCTGGTCAAACAAGAGCTTGTCAAGAAGCTGCTGACCAACTCCAAATGGA TATCGGGCATGTCTATTCATCCCAAGGGCGACAATCTGCTGGTGTCCACC TATGACAAAAAGATGCTCTGGTTCGATTTGGATCTGTCCACAAAGCCCTA CCAGACCATGCGACTCCATCGCAATGCAGTTCGCAGTGTTGCTTTCCATC TTCGATATCCGCTCTTTGCTTCCGGCAGCGATGACCAGGCTGTGATCGTC TCCCATGGCATGGTCTATAATGACCTGCTGCAAAACCCTTTGATTGTGCC TCTCAAGAAGCTGCAAACACACGAGAAACGCGATGAGTTTGGTGTGCTGG ATGTTAACTGGCATCCGGTGCAGCCATGGGTCTTCTCCACGGGCGCGGAC AGTACCATCCGACTATACACGTAATTTAGGTGTACAAACCCCAAGAAAGT TTCTTTTAGTTTCCGAAAGTTTTGTGAAATTTCAATAGTAAATAAAAAAT ATATTAATTTTTATGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13676851..13678386 | 1..1536 | 7680 | 100 | Plus |
chr2R | 21145070 | chr2R | 13678450..13678937 | 1537..2024 | 2425 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 13678997..13679293 | 2024..2320 | 1485 | 100 | Plus |
chr2R | 21145070 | chr2R | 13679357..13679601 | 2321..2565 | 1225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17789698..17791233 | 1..1536 | 7680 | 100 | Plus |
2R | 25286936 | 2R | 17791297..17791784 | 1537..2024 | 2440 | 100 | Plus |
2R | 25286936 | 2R | 17791844..17792140 | 2024..2320 | 1485 | 100 | Plus |
2R | 25286936 | 2R | 17792204..17792452 | 2321..2569 | 1245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17790897..17792432 | 1..1536 | 7680 | 100 | Plus |
2R | 25260384 | 2R | 17792496..17792983 | 1537..2024 | 2440 | 100 | Plus |
2R | 25260384 | 2R | 17793043..17793339 | 2024..2320 | 1485 | 100 | Plus |
2R | 25260384 | 2R | 17793403..17793651 | 2321..2569 | 1245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 8356..8389 | 2527..2560 | 125 | 85.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13679357..13679573 | 2321..2537 | 100 | -> | Plus |
chr2R | 13678998..13679293 | 2025..2320 | 100 | -> | Plus |
chr2R | 13676851..13677221 | 1..371 | 100 | == | Plus |
chr2R | 13677308..13678386 | 458..1536 | 100 | -> | Plus |
chr2R | 13678450..13678937 | 1537..2024 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 1..100 | 50..149 | 100 | == | Plus |
CG5033-RA | 101..2355 | 220..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 1..100 | 50..149 | 100 | == | Plus |
CG5033-RA | 101..2355 | 220..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 1..100 | 50..149 | 100 | == | Plus |
CG5033-RA | 101..2355 | 220..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 1..100 | 50..149 | 100 | == | Plus |
CG5033-RA | 101..2355 | 220..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 1..100 | 50..149 | 100 | == | Plus |
CG5033-RA | 101..2355 | 220..2474 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RB | 1..2565 | 1..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RB | 1..2565 | 1..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 20..168 | 1..149 | 100 | == | Plus |
CG5033-RA | 169..2514 | 220..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RB | 1..2565 | 1..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5033-RA | 20..168 | 1..149 | 100 | == | Plus |
CG5033-RA | 169..2514 | 220..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17789698..17791233 | 1..1536 | 100 | -> | Plus |
2R | 17791297..17791784 | 1537..2024 | 100 | -> | Plus |
2R | 17791845..17792140 | 2025..2320 | 100 | -> | Plus |
2R | 17792204..17792448 | 2321..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17789698..17791233 | 1..1536 | 100 | -> | Plus |
2R | 17791297..17791784 | 1537..2024 | 100 | -> | Plus |
2R | 17791845..17792140 | 2025..2320 | 100 | -> | Plus |
2R | 17792204..17792448 | 2321..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17789698..17791233 | 1..1536 | 100 | -> | Plus |
2R | 17791297..17791784 | 1537..2024 | 100 | -> | Plus |
2R | 17791845..17792140 | 2025..2320 | 100 | -> | Plus |
2R | 17792204..17792448 | 2321..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13677203..13678738 | 1..1536 | 100 | -> | Plus |
arm_2R | 13678802..13679289 | 1537..2024 | 100 | -> | Plus |
arm_2R | 13679350..13679645 | 2025..2320 | 100 | -> | Plus |
arm_2R | 13679709..13679953 | 2321..2565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17790897..17792432 | 1..1536 | 100 | -> | Plus |
2R | 17792496..17792983 | 1537..2024 | 100 | -> | Plus |
2R | 17793044..17793339 | 2025..2320 | 100 | -> | Plus |
2R | 17793403..17793647 | 2321..2565 | 100 | Plus |
Translation from 620 to 2473
> RE74146.pep MHWYDEYKHIGYDWDAKKIIKPPQGDQIDEFLRKIEDPDFWRTVKDPLTG QDVRLTDEDIALIKRIVSGRIPNKDHEEYEPWIEWFTSEVEKMPIKNVPD HKRSFLPSVSEKKRVSRMVHALKMGWMKTTEEVEREKQAKRGPKFYMLWE TDTSREHMRRIHDPVSAPKRDLPGHAESYNPPPEYLFDAKETKEWLKLKD EPHKRKLHFMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNI DAEYLIPKLPSPRDLQPFPTVESMVYRGHTDLVRSVSVEPKGEYLVSGSD DKTVKIWEIATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVN PKVGDKVLVKKTDDLLAEAPSQDVIESERIKTAVQWSNAEADEQEKGVRV VITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRSQIPFSKSK GLIQFVLFHPVKPCFFVATQHNIRIYDLVKQELVKKLLTNSKWISGMSIH PKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFA SGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVNWHPV QPWVFSTGADSTIRLYT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11675-PA | 793 | GF11675-PA | 177..793 | 1..617 | 3169 | 94.3 | Plus |
Dana\GF10412-PA | 403 | GF10412-PA | 14..296 | 276..560 | 183 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21824-PA | 784 | GG21824-PA | 168..784 | 1..617 | 3329 | 100 | Plus |
Dere\GG13777-PA | 390 | GG13777-PA | 14..296 | 276..560 | 201 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22027-PA | 786 | GH22027-PA | 170..786 | 1..617 | 3154 | 94 | Plus |
Dgri\GH14795-PA | 404 | GH14795-PA | 15..297 | 276..560 | 191 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5033-PA | 784 | CG5033-PA | 168..784 | 1..617 | 3294 | 100 | Plus |
Poc1-PA | 391 | CG10191-PA | 14..296 | 276..560 | 182 | 24.1 | Plus |
Poc1-PB | 403 | CG10191-PB | 14..296 | 276..560 | 182 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19116-PA | 792 | GI19116-PA | 176..792 | 1..617 | 3157 | 94.2 | Plus |
Dmoj\GI11850-PA | 402 | GI11850-PA | 5..293 | 269..559 | 192 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17224-PA | 785 | GL17224-PA | 169..785 | 1..617 | 3125 | 93.5 | Plus |
Dper\GL15696-PA | 413 | GL15696-PA | 14..296 | 276..560 | 190 | 25.6 | Plus |
Dper\GL21559-PA | 413 | GL21559-PA | 14..296 | 276..560 | 176 | 25.3 | Plus |
Dper\GL25364-PA | 413 | GL25364-PA | 14..296 | 276..560 | 167 | 25 | Plus |
Dper\GL25365-PA | 413 | GL25365-PA | 14..296 | 276..560 | 167 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18610-PA | 786 | GA18610-PA | 170..786 | 1..617 | 3130 | 93.5 | Plus |
Dpse\GA10144-PA | 413 | GA10144-PA | 14..296 | 276..560 | 188 | 25.3 | Plus |
Dpse\GA26333-PB | 299 | GA26333-PB | 14..296 | 276..560 | 182 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21825-PA | 784 | GM21825-PA | 168..784 | 1..617 | 3323 | 99.7 | Plus |
Dsec\GM24599-PA | 389 | GM24599-PA | 14..296 | 276..560 | 195 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11318-PA | 1375 | GD11318-PA | 989..1375 | 231..617 | 2069 | 99.5 | Plus |
Dsim\GD11318-PA | 1375 | GD11318-PA | 168..363 | 1..196 | 1071 | 99.5 | Plus |
Dsim\GD12669-PA | 389 | GD12669-PA | 14..296 | 276..560 | 196 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22246-PA | 780 | GJ22246-PA | 164..780 | 1..617 | 3136 | 93.5 | Plus |
Dvir\GJ13548-PA | 405 | GJ13548-PA | 11..293 | 276..559 | 191 | 27 | Plus |
Translation from 620 to 2473
> RE74146.hyp MHWYDEYKHIGYDWDAKKIIKPPQGDQIDEFLRKIEDPDFWRTVKDPLTG QDVRLTDEDIALIKRIVSGRIPNKDHEEYEPWIEWFTSEVEKMPIKNVPD HKRSFLPSVSEKKRVSRMVHALKMGWMKTTEEVEREKQAKRGPKFYMLWE TDTSREHMRRIHDPVSAPKRDLPGHAESYNPPPEYLFDAKETKEWLKLKD EPHKRKLHFMPQKFKSLREVPAYSRYLRERFLRCLDLYLCPRAKRVKLNI DAEYLIPKLPSPRDLQPFPTVESMVYRGHTDLVRSVSVEPKGEYLVSGSD DKTVKIWEIATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVN PKVGDKVLVKKTDDLLAEAPSQDVIESERIKTAVQWSNAEADEQEKGVRV VITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRSQIPFSKSK GLIQFVLFHPVKPCFFVATQHNIRIYDLVKQELVKKLLTNSKWISGMSIH PKGDNLLVSTYDKKMLWFDLDLSTKPYQTMRLHRNAVRSVAFHLRYPLFA SGSDDQAVIVSHGMVYNDLLQNPLIVPLKKLQTHEKRDEFGVLDVNWHPV QPWVFSTGADSTIRLYT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5033-PA | 784 | CG5033-PA | 168..784 | 1..617 | 3294 | 100 | Plus |
Poc1-PA | 391 | CG10191-PA | 14..296 | 276..560 | 182 | 24.1 | Plus |
Poc1-PB | 403 | CG10191-PB | 14..296 | 276..560 | 182 | 24.1 | Plus |