BDGP Sequence Production Resources |
Search the DGRC for RE74471
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 744 |
Well: | 71 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32816-RD |
Protein status: | RE74471.pep: gold |
Sequenced Size: | 1830 |
Gene | Date | Evidence |
---|---|---|
CG32816 | 2005-08-10 | Manual selection by Joe Carlson |
CG32816 | 2008-04-29 | Release 5.5 accounting |
CG32816 | 2008-04-29 | Picked prior to 5.5 |
CG32816 | 2008-08-15 | Release 5.9 accounting |
CG32816 | 2008-12-18 | 5.12 accounting |
1830 bp assembled on 2007-11-20
GenBank Submission: BT031292
> RE74471.complete AGACCGTTGATGGCGTTCGCTGGAACCGCTTGGCACACGTCGCGTTACTT GGCCGCCAGCGCGATTTAAACCGCCAGTTGACAAAGTGCGTTTTGTACCC CACTTGCGAGCCCCGTAACCCCCGAAAAAATTGTGGTTGCTTTGCAGCTT CAGCGACGAATTTACCGATAGAAAGGTATTTCCCAATAACACATATTTGC TTTTATAAAACGCATTAAAAAGACAAAATACAAATATGGCATTGTCGAAG AAACTAAGCAGCAAAATCTATCGGAGCAGCAGACAAAAAAATGTTAACGT TTTGGGAAAAGACATCAAAAAAATCAGCAGATATACCAAACCAAATCAGC GGAGCACTTGCATCAAGTAACTTAGCTATCTGCGCCTGTCTAATAGTAAT CTTCATTGCATCTGTAACCACGGCCAAAACACCGGATCAGGAAGCTATCC ATCACAAAAATGACGAATTTCCGGAAGAGGAAAGCGACATGGTGATGGAG CCAAATGATTTTTCGCCAATCACTGTACTAAAGTCACATGAACAACACTT TCATATGCCGCCCACAACGCATCTTCAGCCACAAGTTCAAGCTAGAATTC ATCCTAGAGTTCAACCCAGAAAATTTCAATCCGCACTCCAACAAAATGCT GAGGAGCCATTCCGGCCCATTGCTAATCCAAATACGAAGATTGTTGGCGA TTCTCATACGCAGGCTGCCCAAAATTTCTACCCACCTTTCTACCATGAGG CTCCTCCACTGGGCCATTCCAGACCTTACTTTGGTCACGGCCCGCCTGTA TCGGAAACAACTCCTTTATCCTTACCCCTTCCGCTCTTGACAACTCAACA GCAACAGCCAGCAACTCAGCAGCGGACTTTCGATGCCAGTATACTTGGAA GTGGGGATTTTGGTGTCCTTAGAGGTGGAACCTTCTATCCGGAGGAGGAA ATGCCCTATCACCCCGAAGATAACAGTGATTACATCTATGGAGATGCTAA CAATGGACACGGTCGACCATCTGAGGGTTTTGTTCAAAAGTACACGTATC CAGAGGAGCAGTTCGCTAATTTTCGCGATTTTGCCGATATCAACACGCCC GCCGATACGGCGTTTTCGCAATTTGTGGTGGTGTATGCGGCCAAAAATGC CTCTGTACCACACTCTCATCCGCATCCTAAAAACATATTTGAACAGTTAG AGCAGCTGGACAGGGAAAAAGAGCTGAAAAATACCGAATTTGAGAACAAA ACTTCTTCGAAAATAAAGTCGAAATTGTCTAATACAAAGTTGCAAAAAAA ATACCGAAAAAAAACGGCCCCCAAAGTCCAGGATCCTCAAGAAATAGAGC CTTTACTAGCTCTAAGTTAAGCGTCAAAAAGAATAACCCTATAAGCCAGA ACCCAAACTTTCGAATACCGTTGTTAGATTTATTTATTATATTTCGAGAT AAACGCAAGCCACAACAAAATAGCCACCCCAATTTCCATGTCAACAAATG CAAGCACTTTATCTAATACATATACATATACTTTTTCAGTTTTTTTTTTG TCTGTCTGCTTTTAATCTCGCAATGTTTGTTAAATTTTTAAATTAGCCCG TAGTCTACTACATATATATTACATTTTTATATAAATATATATAAAATATA TTTTATGCGCAACTATAATGTAATTCTTTTTGTCCAATTAAGCATAAATT TATTATGTGTGTGTACATAAAACCAGATATGATAATTGTAATTTAATACC TAAATAAAATTGATTTAAAAAATAGTACACAAATAATAATTTAATAAATT ACTTTATTGAGTCACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32816-RA | 1819 | CG32816-RA | 3..1818 | 1..1814 | 9025 | 99.8 | Plus |
CG32816-RB | 1853 | CG32816-RB | 184..1852 | 148..1814 | 8290 | 99.8 | Plus |
CG32816.d | 1775 | CG32816.d | 130..1774 | 172..1814 | 8155 | 99.8 | Plus |
CG32816-RB | 1853 | CG32816-RB | 53..183 | 1..131 | 655 | 100 | Plus |
CG32816.d | 1775 | CG32816.d | 3..133 | 1..131 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 210578..211930 | 1814..462 | 6765 | 100 | Minus |
chrX | 22417052 | chrX | 227571..227903 | 462..132 | 1600 | 99.4 | Minus |
chrX | 22417052 | chrX | 228673..228803 | 131..1 | 655 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 228673..228803 | 1..131 | 100 | Minus | |
chrX | 210577..211929 | 463..1815 | 99 | <- | Minus |
chrX | 227571..227903 | 132..462 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 1..1137 | 236..1370 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 1..1137 | 236..1370 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RB | 1..1137 | 236..1370 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 1..1137 | 236..1370 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 1..1137 | 236..1370 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 3..1818 | 1..1815 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 3..1818 | 1..1815 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 5..1820 | 1..1815 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 1..1372 | 1..1370 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32816-RA | 5..1820 | 1..1815 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 316576..317928 | 463..1815 | 99 | <- | Minus |
X | 333565..333897 | 132..462 | 99 | <- | Minus |
X | 334667..334797 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 316576..317928 | 463..1815 | 99 | <- | Minus |
X | 333565..333897 | 132..462 | 99 | <- | Minus |
X | 334667..334797 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 316576..317928 | 463..1815 | 99 | <- | Minus |
X | 333565..333897 | 132..462 | 99 | <- | Minus |
X | 334667..334797 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 228700..228830 | 1..131 | 100 | Minus | |
arm_X | 210609..211961 | 463..1815 | 99 | <- | Minus |
arm_X | 227598..227930 | 132..462 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 342765..342895 | 1..131 | 100 | Minus | |
X | 341663..341995 | 132..462 | 99 | <- | Minus |
X | 324674..326026 | 463..1815 | 99 | <- | Minus |
Translation from 235 to 1369
> RE74471.hyp MALSKKLSSKIYRSSRQKKMLTFWEKTSKKSADIPNQISGALASSNLAIC ACLIVIFIASVTTAKTPDQEAIHHKNDEFPEEESDMVMEPNDFSPITVLK SHEQHFHMPPTTHLQPQVQARIHPRVQPRKFQSALQQNAEEPFRPIANPN TKIVGDSHTQAAQNFYPPFYHEAPPLGHSRPYFGHGPPVSETTPLSLPLP LLTTQQQQPATQQRTFDASILGSGDFGVLRGGTFYPEEEMPYHPEDNSDY IYGDANNGHGRPSEGFVQKYTYPEEQFANFRDFADINTPADTAFSQFVVV YAAKNASVPHSHPHPKNIFEQLEQLDREKELKNTEFENKTSSKIKSKLSN TKLQKKYRKKTAPKVQDPQEIEPLLALS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32816-PF | 378 | CG32816-PF | 1..378 | 1..378 | 2000 | 100 | Plus |
CG32816-PE | 378 | CG32816-PE | 1..378 | 1..378 | 2000 | 100 | Plus |
CG32816-PA | 378 | CG32816-PA | 1..378 | 1..378 | 2000 | 100 | Plus |
CG32816-PB | 378 | CG32816-PB | 1..378 | 1..378 | 2000 | 100 | Plus |
CG32816-PD | 293 | CG32816-PD | 1..293 | 86..378 | 1573 | 100 | Plus |
Translation from 290 to 1369
> RE74471.pep MLTFWEKTSKKSADIPNQISGALASSNLAICACLIVIFIASVTTAKTPDQ EAIHHKNDEFPEEESDMVMEPNDFSPITVLKSHEQHFHMPPTTHLQPQVQ ARIHPRVQPRKFQSALQQNAEEPFRPIANPNTKIVGDSHTQAAQNFYPPF YHEAPPLGHSRPYFGHGPPVSETTPLSLPLPLLTTQQQQPATQQRTFDAS ILGSGDFGVLRGGTFYPEEEMPYHPEDNSDYIYGDANNGHGRPSEGFVQK YTYPEEQFANFRDFADINTPADTAFSQFVVVYAAKNASVPHSHPHPKNIF EQLEQLDREKELKNTEFENKTSSKIKSKLSNTKLQKKYRKKTAPKVQDPQ EIEPLLALS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20816-PA | 349 | GF20816-PA | 1..333 | 35..345 | 1099 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12764-PA | 380 | GG12764-PA | 20..380 | 1..359 | 1618 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24763-PA | 363 | GH24763-PA | 33..363 | 41..359 | 999 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32816-PF | 378 | CG32816-PF | 20..378 | 1..359 | 1912 | 100 | Plus |
CG32816-PE | 378 | CG32816-PE | 20..378 | 1..359 | 1912 | 100 | Plus |
CG32816-PA | 378 | CG32816-PA | 20..378 | 1..359 | 1912 | 100 | Plus |
CG32816-PB | 378 | CG32816-PB | 20..378 | 1..359 | 1912 | 100 | Plus |
CG32816-PD | 293 | CG32816-PD | 1..293 | 67..359 | 1573 | 100 | Plus |
CG32816-PC | 293 | CG32816-PC | 1..293 | 67..359 | 1573 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15795-PA | 353 | GI15795-PA | 32..317 | 50..320 | 954 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20175-PA | 341 | GL20175-PA | 7..328 | 59..345 | 988 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17161-PA | 460 | GA17161-PA | 80..447 | 11..345 | 1050 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19044-PA | 376 | GM19044-PA | 16..376 | 1..359 | 1635 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16483-PA | 376 | GD16483-PA | 16..376 | 1..359 | 1657 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18648-PA | 365 | GJ18648-PA | 24..365 | 41..359 | 932 | 64.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10129-PA | 373 | GK10129-PA | 120..373 | 135..359 | 745 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16590-PA | 381 | GE16590-PA | 20..381 | 1..359 | 1614 | 90.6 | Plus |