BDGP Sequence Production Resources |
Search the DGRC for RE74472
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 744 |
Well: | 72 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Pcmt-RA |
Protein status: | RE74472.pep: gold |
Sequenced Size: | 965 |
Gene | Date | Evidence |
---|---|---|
CG2152 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2152 | 2002-11-12 | Blastp of sequenced clone |
CG2152 | 2003-01-01 | Sim4 clustering to Release 3 |
Pcmt | 2008-04-29 | Release 5.5 accounting |
Pcmt | 2008-08-15 | Release 5.9 accounting |
Pcmt | 2008-12-18 | 5.12 accounting |
965 bp (965 high quality bases) assembled on 2002-11-12
GenBank Submission: AY075527
> RE74472.complete AGTGTTATCGTTGGCCCGCCACCTCTGGTACAATATTATAACAAACTAAA CAAAACAACAAGACGGTGGAAAAAGGGAATCTTGTGGTGCGGATTGGTAA ACTGGGCTTCTTCTTCCGCGCCTTCAGCATGGCGTGGCGATCCGTGGGAG CCAATAATGAAGACCTGATTCGCCAACTGAAGGATCACGGCGTCATTGCA AGTGATGCGGTGGCCCAGGCGATGAAGGAAACCGACCGCAAGCACTACTC TCCGCGCAACCCCTACATGGACGCCCCGCAACCCATTGGAGGAGGTGTCA CCATCAGTGCTCCTCACATGCATGCCTTCGCCTTGGAGTATCTACGCGAC CACTTGAAGCCCGGTGCACGTATACTGGATGTGGGCTCTGGATCTGGCTA CCTCACAGCCTGCTTCTATCGTTACATCAAGGCTAAGGGCGTTGATGCGG ACACCCGAATCGTGGGCATAGAGCACCAGGCAGAGCTGGTGCGGCGGAGC AAGGCCAACTTAAACACCGACGACCGTAGCATGCTGGACTCCGGCCAGTT GCTGATCGTCGAGGGTGACGGCCGCAAGGGATACCCCCCGAACGCCCCGT ATAATGCAATCCATGTAGGAGCAGCTGCTCCCGACACACCCACCGAACTC ATCAACCAACTGGCCAGCGGCGGACGCCTGATAGTTCCAGTCGGTCCCGA CGGCGGGTCTCAGTACATGCAACAGTACGACAAGGACGCCAATGGGAAGG TGGAGATGACACGTCTCATGGGCGTAATGTACGTCCCTCTCACGGATCTT CGCTCCTGACTGCACAGAGTGGGAAGGTCGCTCGTTGCGGTGCTGCTGCT CGTGTTTTTTTCTCTACCTAATTTTGGCTTACTAGTTAATCAATCAATCA AAATTAAATTGCTTTTTTTCACGTTGAGTGCAAATATATAAGTTTACCGA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pcmt-RA | 1215 | Pcmt-RA | 260..1213 | 1..955 | 4705 | 99.6 | Plus |
Pcmt.a | 996 | Pcmt.a | 1..725 | 1..725 | 3610 | 99.8 | Plus |
Pcmt.b | 700 | Pcmt.b | 70..699 | 321..951 | 3115 | 99.8 | Plus |
Pcmt.a | 996 | Pcmt.a | 771..995 | 726..951 | 1090 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1378930..1379335 | 725..320 | 2030 | 100 | Minus |
chr3R | 27901430 | chr3R | 1378482..1378708 | 949..722 | 1090 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 1379788..1379970 | 183..1 | 900 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 1379590..1379727 | 320..183 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5553271..5553676 | 725..320 | 2030 | 100 | Minus |
3R | 32079331 | 3R | 5552817..5553049 | 955..722 | 1105 | 99.1 | Minus |
3R | 32079331 | 3R | 5554129..5554311 | 183..1 | 900 | 99.5 | Minus |
3R | 32079331 | 3R | 5553931..5554068 | 320..183 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5294102..5294507 | 725..320 | 2030 | 100 | Minus |
3R | 31820162 | 3R | 5293648..5293880 | 955..722 | 1115 | 99.1 | Minus |
3R | 31820162 | 3R | 5294960..5295142 | 183..1 | 900 | 99.4 | Minus |
3R | 31820162 | 3R | 5294762..5294899 | 320..183 | 690 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 999..1062 | 20..82 | 110 | 65.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1378482..1378704 | 726..949 | 99 | <- | Minus |
chr3R | 1378930..1379334 | 321..725 | 100 | <- | Minus |
chr3R | 1379590..1379726 | 184..320 | 100 | <- | Minus |
chr3R | 1379788..1379970 | 1..183 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..681 | 129..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..681 | 129..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..681 | 129..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..681 | 129..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..681 | 129..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..948 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..948 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 6..953 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 1..948 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pcmt-RA | 6..953 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5552823..5553045 | 726..949 | 99 | <- | Minus |
3R | 5553271..5553675 | 321..725 | 100 | <- | Minus |
3R | 5553931..5554067 | 184..320 | 100 | <- | Minus |
3R | 5554129..5554311 | 1..183 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5552823..5553045 | 726..949 | 99 | <- | Minus |
3R | 5553271..5553675 | 321..725 | 100 | <- | Minus |
3R | 5553931..5554067 | 184..320 | 100 | <- | Minus |
3R | 5554129..5554311 | 1..183 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5552823..5553045 | 726..949 | 99 | <- | Minus |
3R | 5553271..5553675 | 321..725 | 100 | <- | Minus |
3R | 5553931..5554067 | 184..320 | 100 | <- | Minus |
3R | 5554129..5554311 | 1..183 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1379653..1379789 | 184..320 | 100 | <- | Minus |
arm_3R | 1379851..1380033 | 1..183 | 99 | Minus | |
arm_3R | 1378545..1378767 | 726..949 | 99 | <- | Minus |
arm_3R | 1378993..1379397 | 321..725 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5293654..5293876 | 726..949 | 99 | <- | Minus |
3R | 5294102..5294506 | 321..725 | 100 | <- | Minus |
3R | 5294762..5294898 | 184..320 | 100 | <- | Minus |
3R | 5294960..5295142 | 1..183 | 99 | Minus |
Translation from 128 to 808
> RE74472.pep MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAP QPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYI KAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQY DKDANGKVEMTRLMGVMYVPLTDLRS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16041-PA | 226 | GF16041-PA | 1..226 | 1..226 | 1053 | 86.7 | Plus |
Dana\GF19032-PA | 92 | GF19032-PA | 2..89 | 124..211 | 367 | 79.5 | Plus |
Dana\GF16034-PA | 84 | GF16034-PA | 2..77 | 124..199 | 342 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10966-PA | 226 | GG10966-PA | 1..226 | 1..226 | 1145 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22401-PA | 226 | GH22401-PA | 1..226 | 1..226 | 999 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pcmt-PA | 226 | CG2152-PA | 1..226 | 1..226 | 1183 | 100 | Plus |
Pcmt-PC | 203 | CG2152-PC | 1..199 | 1..199 | 1044 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24486-PA | 226 | GI24486-PA | 1..226 | 1..226 | 1024 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22157-PA | 226 | GL22157-PA | 1..226 | 1..226 | 1059 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15271-PA | 226 | GA15271-PA | 1..226 | 1..226 | 1063 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10623-PA | 226 | GM10623-PA | 1..226 | 1..226 | 1178 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19608-PA | 227 | GD19608-PA | 1..208 | 1..208 | 1082 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24552-PA | 226 | GJ24552-PA | 1..226 | 1..226 | 1046 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13781-PA | 226 | GK13781-PA | 1..226 | 1..226 | 1047 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24165-PA | 226 | GE24165-PA | 1..226 | 1..226 | 1163 | 96.9 | Plus |
Translation from 128 to 808
> RE74472.hyp MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAP QPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYI KAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQY DKDANGKVEMTRLMGVMYVPLTDLRS*