BDGP Sequence Production Resources |
Search the DGRC for RE74511
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 745 |
Well: | 11 |
Vector: | pFlc-1 |
Associated Gene/Transcript | RpLP0-RA |
Protein status: | RE74511.pep: gold |
Preliminary Size: | 1214 |
Sequenced Size: | 1277 |
Gene | Date | Evidence |
---|---|---|
CG7490 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7490 | 2002-11-12 | Blastp of sequenced clone |
CG7490 | 2003-01-01 | Sim4 clustering to Release 3 |
RpLP0 | 2008-04-29 | Release 5.5 accounting |
RpLP0 | 2008-08-15 | Release 5.9 accounting |
RpLP0 | 2008-12-18 | 5.12 accounting |
1277 bp (1277 high quality bases) assembled on 2002-11-12
GenBank Submission: AY075528
> RE74511.complete GGTATCTTATTCGCCATCGAAGCGGTCACACTGGGTGCCGCCGCCAACTT CACTCTTTCCGTTCTGTGAGCGAAAACCGAAAAGTCTGTGCTTTGTTCTT AAATTCACCCGACGAGTCCCTAATACACAATTAAAATGGTTAGGGAGAAC AAGGCAGCGTGGAAGGCTCAGTACTTCATCAAGGTTGTGGAACTGTTCGA TGAGTTCCCAAAGTGCTTCATCGTGGGCGCCGACAACGTGGGCTCCAAGC AGATGCAGAACATCCGTACCAGCCTGCGTGGACTGGCCGTCGTGCTTATG GGCAAGAACACCATGATGCGCAAGGCCATCCGCGGTCATCTGGAGAACAA CCCGCAGCTGGAGAAGCTGCTACCCCACATCAAGGGCAACGTGGGATTCG TGTTCACCAAGGGCGATCTCGCCGAGGTGCGCGACAAGCTGCTGGAGTCC AAGGTGCGCGCCCCCGCCCGTCCCGGCGCTATTGCCCCTCTGCACGTCAT CATCCCGGCGCAGAACACCGGCTTGGGACCCGAGAAGACCAGTTTCTTCC AGGCCCTGTCCATCCCGACCAAAATTTCCAAGGGAACAATTGAAATCATC AACGATGTGCCCATCCTGAAGCCTGGCGACAAGGTCGGCGCCTCCGAGGC GACACTGCTCAACATGTTGAACATCTCGCCCTTCTCGTACGGTCTGATTG TCAACCAGGTCTACGACTCCGGCTCGATCTTTTCGCCGGAGATCCTGGAC ATCAAGCCCGAGGATCTGCGCGCCAAGTTCCAACAGGGAGTGGCCAACTT GGCCGCCGTTTGTTTGTCCGTGGGCTACCCCACCATCGCCTCGGCCCCGC ACAGCATTGCCAACGGATTCAAGAATCTGCTGGCCATTGCTGCCACCACC GAGGTGGAGTTCAAGGAGGCGACCACCATCAAGGAGTACATCAAGGACCC CAGCAAGTTCGCCGCAGCTGCTTCGGCTTCGGCTGCCCCCGCGGCCGGCG GAGCTACCGAGAAGAAGGAGGAGGCCAAGAAGCCCGAGTCCGAATCAGAG GAGGAGGACGATGATATGGGTTTCGGTCTGTTCGACTAAGCTGGATCCCG ATTGCAGAATGCCCTCTGCGGCGCCCGCGAACCATCGCTTCCGCTTTCGG CGTTTACCCACTAAGACCCTTTGTTATGTTTTCTATGTGCAAATTATTGC CGCGGTTTGACGGACCCAATGGCGAGTTGCATTAAACATGCTGTAAACTG CTCGAAAGCGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpLP0.a | 1443 | RpLP0.a | 68..1329 | 1..1262 | 6310 | 100 | Plus |
RpLP0-RA | 1424 | RpLP0-RA | 49..1310 | 1..1262 | 6310 | 100 | Plus |
RpLP0.b | 1378 | RpLP0.b | 212..1378 | 95..1261 | 5835 | 100 | Plus |
RpLP0.b | 1378 | RpLP0.b | 68..162 | 1..95 | 475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 22065350..22066422 | 189..1261 | 5365 | 100 | Plus |
chr3L | 24539361 | chr3L | 22065182..22065277 | 95..190 | 480 | 100 | Plus |
chr3L | 24539361 | chr3L | 22064977..22065071 | 1..95 | 475 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 22069515..22070588 | 189..1262 | 5370 | 100 | Plus |
3L | 28103327 | 3L | 22069347..22069442 | 95..190 | 480 | 100 | Plus |
3L | 28103327 | 3L | 22069142..22069236 | 1..95 | 475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 22064977..22065071 | 1..95 | 100 | -> | Plus |
chr3L | 22065183..22065276 | 96..189 | 100 | -> | Plus |
chr3L | 22065351..22066422 | 190..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..954 | 136..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..954 | 136..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..954 | 136..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..954 | 136..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..954 | 136..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..1261 | 1..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..1261 | 1..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RB | 68..1328 | 1..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RA | 1..1261 | 1..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpLP0-RB | 68..1328 | 1..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22076042..22076136 | 1..95 | 100 | -> | Plus |
3L | 22076248..22076341 | 96..189 | 100 | -> | Plus |
3L | 22076416..22077487 | 190..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22076042..22076136 | 1..95 | 100 | -> | Plus |
3L | 22076248..22076341 | 96..189 | 100 | -> | Plus |
3L | 22076416..22077487 | 190..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22076042..22076136 | 1..95 | 100 | -> | Plus |
3L | 22076248..22076341 | 96..189 | 100 | -> | Plus |
3L | 22076416..22077487 | 190..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 22069142..22069236 | 1..95 | 100 | -> | Plus |
arm_3L | 22069348..22069441 | 96..189 | 100 | -> | Plus |
arm_3L | 22069516..22070587 | 190..1261 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 22069516..22070587 | 190..1261 | 100 | Plus | |
3L | 22069142..22069236 | 1..95 | 100 | -> | Plus |
3L | 22069348..22069441 | 96..189 | 100 | -> | Plus |
Translation from 135 to 1088
> RE74511.pep MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGL AVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRD KLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKG TIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFS PEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLA IAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKP ESESEEEDDDMGFGLFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10946-PA | 317 | GF10946-PA | 1..317 | 1..317 | 1638 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16244-PA | 317 | GG16244-PA | 1..317 | 1..317 | 1639 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14667-PA | 318 | GH14667-PA | 1..318 | 1..317 | 1456 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpLP0-PB | 317 | CG7490-PB | 1..317 | 1..317 | 1600 | 100 | Plus |
RpLP0-PA | 317 | CG7490-PA | 1..317 | 1..317 | 1600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13777-PA | 317 | GI13777-PA | 1..317 | 1..317 | 1607 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20389-PA | 317 | GA20389-PA | 1..317 | 1..317 | 1629 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22429-PA | 317 | GM22429-PA | 1..317 | 1..317 | 1657 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15019-PA | 317 | GD15019-PA | 1..317 | 1..317 | 1657 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13582-PA | 317 | GJ13582-PA | 1..317 | 1..317 | 1608 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20443-PA | 317 | GK20443-PA | 1..317 | 1..317 | 1623 | 97.8 | Plus |
Translation from 135 to 1088
> RE74511.hyp MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGL AVVLMGKNTMMRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRD KLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKG TIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSGSIFS PEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLA IAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKP ESESEEEDDDMGFGLFD*