Clone RE74545 Report

Search the DGRC for RE74545

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:745
Well:45
Vector:pFlc-1
Associated Gene/TranscriptNup98-96-RC
Protein status:RE74545.pep: gold
Sequenced Size:4005

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10198 2008-06-10 Manual selection by Ken Wan

Clone Sequence Records

RE74545.complete Sequence

4005 bp assembled on 2008-12-22

GenBank Submission: BT056313.1

> RE74545.complete
ATTTTCTGTCCACTTTTTGCGTCAGACTCGGTCGACTCCTGCTGACTTGA
CAAATTCGCGAGTGTTTATTTGTTTTAAGCTAAGCCTGTCCGGTCCCACA
ACCTTCGCATCCGGCGCAGCCGCCCCAGCTTGCCCAACGTGGTGAAATCG
AAGCATTGCTCATCGCGATAGTTGGCATTCCGGCGAAGGACAAAGCAGGG
GATCTACCTAGTATATGTTTGTTATCTGAGCAGCAGCAGCGAGCAAAATG
TTTGGCGGCGCGAAACCCAGCTTCGGAGCCACTCCGGCGGCCACCAGCTT
TGGCGGATTCAGCGGCACCACAACAACCACTCCGTTTGGCCAGTCGGCAT
TTGGCAAACCCGCCGCACCGGCCTTTGGAAACACCTCCACCTTTGCCGCC
CAACCCGCGCAGCAGTCACTGTTCGGTGCGGCAGCCACACCAGCTCAGCC
CGCCGGAGGCTTATTCGGGGCAAACACGTCCACGGGATTTGGAAGCACTG
CCACAGCTCAGCCCACGGCTTTTGGAGCCTTCTCGCAGCCGCAACAGACC
TCGAACATATTTGGATCCACCCAGACGGCGGCAAGCACCTCCCTCTTTGG
ACAATCGACGCTACCCGCCTTTGGAGCCGCCAAGCCGACTATGACGGCCT
TTGGGCAAACAGCTGCTGCTCAGCCCACGGGCTCTTTGTTTGGCCAACCG
GCTGCCGCCACCAGTACAACAGGATTCGGAGGCTTTGGGACGTCGGCGCC
TACAACCACCAATGTTTTTGGCAGTGGCACCGCCTCCGCCTTTGCCCAAC
CTCAGGCTACGGCCGTGGGAGCTTCCGGAGTCAATACGGGCACGGCCGTG
GCCAAGTACCAGCCAACCATTGGTACAGATACCCTGATGAAGAGCGGTCA
GGCAAATAGTGTGAACACTAAGCAGCACTGCATCACGGCTATGAAGGAGT
TCGAGGGCAAATCTCTGGAGGAGCTCCGCCTGGAAGACTATATGTGCGGG
CGCAAGGGTCCACAGGCTGGGAATGCTCCGGGAGCTTTTGGATTTGGAGC
TCAGGTTACTCAGCCCGCTCAGCCTGCAAGTGGTGGCCTGTTTGGAAGCA
CTGCCCAACCAAGCACAGGTCTGTTTGGCCAAACTGTGACCGAGAATAAG
AGCATGTTTGGCACCACCGCTTTTGGCCAACAACCGGCGACTAACAATGC
ATTCGGAGCAGCAACCCAGCAAAACAACTTTCTGCAAAAGCCCTTTGGAG
CCACCACCACCACTCCGTTTGCCGCTCCCGCAGCTGACGCTTCAAATCCA
TTTGGGGCGAAGCCTGCTTTTGGACAGGGAGGAAGCCTCTTTGGTCAGGC
ACCTGCTACCAGTGCGGCTCCTGCTTTCGGACAGACTAACACAGGATTCG
GAGGCTTTGGAACCACAGCCGGAGCAACGCAACAGTCAACTCTTTTTGGT
GCCACACCAGCCGCCGATCCAAATAAATCAGCCTTTGGGTTGGGAACGGC
TGCATCAGCAGCCACGACAGGTTTTGGATTTGGAGCTCCAGCAACAAGCA
CCGCCGGCGGAGGCCTTTTCGGAAACAAGCCCGCCACTAGCTTTGCTGCT
CCAACTTTCGGCGCAACCTCCACGGCTAGCACTCCGTTTTCAAATTTTGG
CCTGAACACCAGTACAGCAGCAACGGGAGGAGGCCTTTTTAACTCGGGAT
TGAACAAGCCAGCAACGTCCGGATTCGGAGGTTTTGGAGCCACCAGCGCA
GCACCACTTAATTTCAACGCAGGCAACACGGGCGGATCACTTTTCGGAAA
TACAGCCAAGCCGGGAGGAGGTCTTTTTGGAGGAGGTACTACAACCTTGG
GTGGCACGGGTGCTGCCCCAACGGGAGGACTGTTTGGAGGAGGAACTACC
AGTTTCGGAGGTGTCGGTGGTTCCTTGGGCGGAGGAGGCTTCGGTATGGG
TACAAACAACTCGTTAACTGGTGGTATTATGGGAGCTCAGCCCACACTGG
GTATCATGACGCCTTCACACCAGCCCATTCATCAGCAGATCCTAGCTAGG
GTAACTTCTCCCTACGGAGACTCTCCGATTTTCAAGGATCTAAAGCTAAG
CAGTGAAGCAGATGCAACAAGAGCTACAAATCCTGCTGCCCAACAAGCAG
TTCTGGACCTGACCAGCAACCAGTACAAGATAAGTACCAGCAACAATCCT
GCTCCAATGAAGGTAAAGGCGCTGGGCAGCACACTTAATAGAAAATCGCT
GTTTGATGGTCTCGAGGAGTTTGATGCTTCTGTAGAGGGCTTCAATCTGA
AGCCCAGTGCTAAACGATTAGTTATCAAACCCAAAGTAAAAAGTGTAGAG
GGTGGAAATCCCTCTAGCTCTATTGGCAGTGCTCCCAACACGCCCCAATC
TCGACCCAAAGGCGCAACTCCCAACAAAGAACGCGAGTCGTTTAGCGGAG
CCATTCCAAGTGAGCCGCTACCACCAGCTGGAAACTCGCCTGGAGCAACG
AATGGACGGGAAAGTCAGGATAACGGCCGCCGTGAGTCATGGCTGCATCC
TAACAACCTTGAGAAGGTACGCCAGCACAACATTCAGACTGGAATGGATC
AGGGATCGCCCCATAACAGCACCCTCAACGAGCTTGTGCCACGTAAACCT
TTAGATACATACCGACCATCCTCCACCGTTCGCCTCTCGGTGTCAACCAT
CCCAGAGAATCCATTTGAGGATCAATCCAGCACCATTGCACGTCGCGAAA
CCTTCACTTCGCAGCAGGCCAATGAGAGTGTGCTTTCGAACAGATCTAAT
GAGGCAGAGGACTCTGCAGCAAACCAATCCCGCCTAGCCATTGAGGCAGC
TGCTGCAGAGGCAGCAGACGACGAATCACATCCAACAGGCATTGTGCTGC
GACGCGTGGGTTACTATACAATTCCATCGCTAGACGACCTACGCTCCTAT
CTGGCCGAGGACGGATCCTGTGTGGTTCCGAACTTTACGGTGGGTCGGGA
AGGATACGGCAATGTCTTCTTCGGCAAGGAAATGGATGTGGCTGGCCTGA
ACCTCGATGAGATTGTCCACTTTCGCAACAAGGAGATTATCATTTATCCC
GACGACGAAAACAAGCCGCCCATTGGTCAAGGTCTAAACCGTGACGCCCA
GGTCACTTTGGACCAAGTATGGCCGTTGGACAAGACCAAGCACGAAGCCA
TCAAGGACCCACAACGCTTGCTTGAGATGGACTGGGAGGGCAAGTTGCGC
CGGGTGTGCGATAAAAACGATACGCGCTTTATAGAATACCGCCCGGAAAC
GGGTAGTTGGGTCTTCCGCGTCAAGCACTTTTCTAAATATGGCCTGGGAG
ACAGCGACGAAGAGGACGAGTTGCCCACTGACCCGAAAAAAGCCAAAATT
GCAACGCTTGAGGCTCAGCAGCGGGCAAACGCAGAAAAGATGACGCTCAA
TTCGCTGCGCCAAGCGCAGAAGATTTCAGAAGATGCAGCCCGTAACTTGG
ACCCAAAAGCCTTGGTCGCAGGTGTTGCCAGCGGATTCAGGCCAATGGAT
GATACCGCCGAGTTCCTTTTAATGGACAAAACACAATTTTTCCAAGCTGG
TGGCAACTCCGATTTCTCCATGTTTGATCCACCGCGTCAACGTCCAACGA
TTACCAGTCCCACAGCTGTTTTGGCTCAGGAAATGGTAGGCAACGAGGCG
CACAAAATGCAGCTAATGAAGTCATCCTTCTTTGTGGAGGACAATGCTCC
CGAGGACGAACCCATGGGTAGGTGGATAATCTCTTGATGGTCTTTCAAAT
TGCTTACAGTAAAAGATATGTAGATGTTTAAATGTTAATCGTTAGTTTTG
AGCAAATATGTATTGTTAATTATCAACGATATTTAATGATTTTTGATCGT
TGCAAAAAGTATTATATATATATATTTATGTTTAAAAAGGTAGCACAAAT
TATAAAGTTAATAAAGCTTTCAAATGTGTTAGTAAATCCAAAAAAAAAAA
AAAAA

RE74545.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
Nup98-RA 6647 Nup98-RA 236..4000 3..3767 18825 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19601704..19604248 3065..521 12710 100 Minus
chr3R 27901430 chr3R 19604302..19604826 527..3 2625 100 Minus
chr3R 27901430 chr3R 19601114..19601633 3584..3065 2585 99.8 Minus
chr3R 27901430 chr3R 19600641..19601045 3989..3585 1980 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:16:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23778287..23780831 3065..521 12710 100 Minus
3R 32079331 3R 23780885..23781409 527..3 2625 100 Minus
3R 32079331 3R 23777689..23778208 3584..3065 2600 100 Minus
3R 32079331 3R 23777214..23777620 3991..3585 2035 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:35:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23519118..23521662 3065..521 12710 99.9 Minus
3R 31820162 3R 23521716..23522240 527..3 2625 100 Minus
3R 31820162 3R 23518520..23519039 3584..3065 2600 100 Minus
3R 31820162 3R 23518045..23518451 3991..3585 2035 100 Minus
Blast to na_te.dros performed on 2019-03-15 21:06:21 has no hits.

RE74545.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:07:11 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19600641..19601045 3585..3989 92 <- Minus
chr3R 19601114..19601632 3066..3584 99 <- Minus
chr3R 19601704..19604241 528..3065 100 <- Minus
chr3R 19604302..19604827 1..527 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:04:31 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-RA 1..3522 248..3771 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:27:07 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-RC 1..3540 248..3787 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:38:19 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-96-RC 1..3540 248..3787 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:44:08 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-96-RC 1..3540 248..3787 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-22 18:15:56 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-RA 235..4002 1..3771 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:27:07 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-RC 235..4222 1..3989 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:38:19 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-96-RC 1..3987 3..3989 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:44:08 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
Nup98-96-RC 1..3987 3..3989 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:07:11 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23777216..23777620 3585..3989 100 <- Minus
3R 23777689..23778207 3066..3584 100 <- Minus
3R 23778287..23780824 528..3065 100 <- Minus
3R 23780885..23781410 1..527 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:07:11 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23777216..23777620 3585..3989 100 <- Minus
3R 23777689..23778207 3066..3584 100 <- Minus
3R 23778287..23780824 528..3065 100 <- Minus
3R 23780885..23781410 1..527 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:07:11 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23777216..23777620 3585..3989 100 <- Minus
3R 23777689..23778207 3066..3584 100 <- Minus
3R 23778287..23780824 528..3065 100 <- Minus
3R 23780885..23781410 1..527 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:38:19 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19602938..19603342 3585..3989 100 <- Minus
arm_3R 19603411..19603929 3066..3584 100 <- Minus
arm_3R 19604009..19606546 528..3065 100 <- Minus
arm_3R 19606607..19607132 1..527 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:59:40 Download gff for RE74545.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23518520..23519038 3066..3584 100 <- Minus
3R 23518047..23518451 3585..3989 100 <- Minus
3R 23519118..23521655 528..3065 100 <- Minus
3R 23521716..23522241 1..527 99   Minus

RE74545.pep Sequence

Translation from 247 to 3786

> RE74545.pep
MFGGAKPSFGATPAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFA
AQPAQQSLFGAAATPAQPAGGLFGANTSTGFGSTATAQPTAFGAFSQPQQ
TSNIFGSTQTAASTSLFGQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQ
PAAATSTTGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTA
VAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMC
GRKGPQAGNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTEN
KSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADASN
PFGAKPAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLF
GATPAADPNKSAFGLGTAASAATTGFGFGAPATSTAGGGLFGNKPATSFA
APTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGGFGATS
AAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGGLFGGGT
TSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQILA
RVTSPYGDSPIFKDLKLSSEADATRATNPAAQQAVLDLTSNQYKISTSNN
PAPMKVKALGSTLNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSV
EGGNPSSSIGSAPNTPQSRPKGATPNKERESFSGAIPSEPLPPAGNSPGA
TNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMDQGSPHNSTLNELVPRK
PLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFTSQQANESVLSNRS
NEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRS
YLAEDGSCVVPNFTVGREGYGNVFFGKEMDVAGLNLDEIVHFRNKEIIIY
PDDENKPPIGQGLNRDAQVTLDQVWPLDKTKHEAIKDPQRLLEMDWEGKL
RRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGLGDSDEEDELPTDPKKAK
IATLEAQQRANAEKMTLNSLRQAQKISEDAARNLDPKALVAGVASGFRPM
DDTAEFLLMDKTQFFQAGGNSDFSMFDPPRQRPTITSPTAVLAQEMVGNE
AHKMQLMKSSFFVEDNAPEDEPMGRWIIS*

RE74545.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18736-PA 1960 GF18736-PA 1..1173 1..1173 4926 83.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12402-PA 1960 GG12402-PA 1..1173 1..1173 5433 95.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10992-PA 1979 GH10992-PA 1..1178 1..1171 3715 67.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
Nup98-96-PC 1179 CG10198-PC 1..1179 1..1179 6117 100 Plus
Nup98-96-PD 1960 CG10198-PD 1..1173 1..1173 6083 100 Plus
Nup98-96-PA 1960 CG10198-PA 1..1173 1..1173 6083 100 Plus
CG14712-PA 1266 CG14712-PA 573..1240 64..739 326 27 Plus
CG14712-PA 1266 CG14712-PA 649..1216 8..566 314 29 Plus
Nup214-PA 1711 CG3820-PA 1097..1624 2..585 289 27.7 Plus
Nup214-PA 1711 CG3820-PA 1207..1706 12..550 269 26.8 Plus
Nup153-PC 1883 CG4453-PC 1270..1789 13..550 263 26.1 Plus
Nup153-PA 1883 CG4453-PA 1270..1789 13..550 263 26.1 Plus
Nup153-PD 1929 CG4453-PD 1270..1789 13..550 263 26.1 Plus
prc-PB 1713 CG5700-PB 163..742 4..593 258 27 Plus
Muc91C-PB 949 CG7709-PB 150..921 4..760 245 22 Plus
Muc91C-PA 950 CG7709-PA 151..922 4..760 245 22 Plus
prc-PB 1713 CG5700-PB 571..1186 4..588 242 26.9 Plus
Nup54-PA 610 CG8831-PA 4..208 309..500 241 40.2 Plus
Nup153-PD 1929 CG4453-PD 1430..1910 8..521 235 27.1 Plus
Nup54-PA 610 CG8831-PA 3..214 2..206 233 38 Plus
Nup54-PA 610 CG8831-PA 2..218 363..593 231 35.2 Plus
Nup58-PA 546 CG7360-PA 21..262 8..224 224 38.6 Plus
Nup214-PA 1711 CG3820-PA 1239..1706 1..458 223 29.2 Plus
prc-PB 1713 CG5700-PB 384..932 4..593 217 26.5 Plus
prc-PB 1713 CG5700-PB 781..1303 5..583 209 25 Plus
Muc11A-PB 1552 CG32656-PB 409..1111 5..752 206 23.3 Plus
Nup54-PA 610 CG8831-PA 61..215 4..186 202 38.8 Plus
Nup153-PC 1883 CG4453-PC 1430..1863 8..422 200 29.1 Plus
Nup153-PA 1883 CG4453-PA 1430..1863 8..422 200 29.1 Plus
Muc11A-PB 1552 CG32656-PB 530..1253 11..751 192 23.8 Plus
prc-PB 1713 CG5700-PB 645..1201 4..568 189 26.1 Plus
Muc11A-PB 1552 CG32656-PB 629..1267 11..590 185 24.3 Plus
Cpr47Ef-PC 612 CG13214-PC 319..531 353..585 183 31.2 Plus
GlyT-PB 1188 CG5549-PB 778..1185 24..468 182 24.8 Plus
lig-PL 1261 CG8715-PL 392..967 12..568 180 21.3 Plus
lig-PK 1417 CG8715-PK 392..967 12..568 180 21.3 Plus
Cpr47Ef-PD 601 CG13214-PD 289..520 361..585 178 32 Plus
Muc11A-PB 1552 CG32656-PB 269..930 38..750 177 24.2 Plus
Nup58-PA 546 CG7360-PA 1..294 72..391 176 27.8 Plus
CG46026-PA 666 CG46026-PA 146..596 77..552 175 24.9 Plus
lig-PI 1300 CG8715-PI 392..1048 12..575 172 21.8 Plus
CG17108-PA 342 CG17108-PA 18..210 383..591 171 28.4 Plus
lig-PJ 1079 CG8715-PJ 392..1038 12..568 171 21.7 Plus
lig-PH 1330 CG8715-PH 392..1038 12..568 171 21.7 Plus
lig-PG 1332 CG8715-PG 392..1038 12..568 171 21.7 Plus
lig-PF 1332 CG8715-PF 392..1038 12..568 171 21.7 Plus
lig-PE 1332 CG8715-PE 392..1038 12..568 171 21.7 Plus
lig-PB 1332 CG8715-PB 392..1038 12..568 171 21.7 Plus
lig-PA 1343 CG8715-PA 392..1038 12..568 171 21.7 Plus
lig-PC 1343 CG8715-PC 392..1038 12..568 171 21.7 Plus
lig-PD 1375 CG8715-PD 392..1038 12..568 171 21.7 Plus
Alh-PD 1323 CG1070-PD 335..1067 19..724 170 21.3 Plus
Alh-PA 1376 CG1070-PA 388..1120 19..724 170 21.3 Plus
glo-PA 586 CG6946-PA 264..478 350..573 169 31.6 Plus
glo-PB 586 CG6946-PB 264..478 350..573 169 31.6 Plus
Nup153-PC 1883 CG4453-PC 1334..1723 260..586 165 25.4 Plus
Nup153-PA 1883 CG4453-PA 1334..1723 260..586 165 25.4 Plus
Nup153-PD 1929 CG4453-PD 1334..1723 260..586 165 25.4 Plus
Nup58-PA 546 CG7360-PA 4..310 313..657 164 28.3 Plus
CG17108-PA 342 CG17108-PA 112..324 352..580 163 31.4 Plus
HnRNP-K-PD 315 CG13425-PD 11..207 384..585 163 33 Plus
HnRNP-K-PB 413 CG13425-PB 106..302 384..585 163 33 Plus
HnRNP-K-PE 493 CG13425-PE 189..385 384..585 163 33 Plus
HnRNP-K-PF 496 CG13425-PF 189..385 384..585 163 33 Plus
HnRNP-K-PA 496 CG13425-PA 189..385 384..585 163 33 Plus
HnRNP-K-PC 502 CG13425-PC 195..391 384..585 163 33 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24505-PA 1975 GI24505-PA 1..1175 1..1171 3699 67.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24268-PA 1981 GL24268-PA 601..1200 590..1171 2186 71.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10149-PA 1981 GA10149-PA 601..1191 590..1162 2163 70.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23537-PA 1961 GM23537-PA 1..1173 1..1173 5976 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Nup98-PA 1962 GD18351-PA 1..1174 1..1173 5980 97.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24642-PA 1969 GJ24642-PA 1..1169 1..1171 3815 69.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13519-PA 1945 GK13519-PA 1..1180 1..1175 3862 71.5 Plus
Dwil\GK18166-PA 550 GK18166-PA 381..550 878..1047 696 68.2 Plus
Dwil\GK18166-PA 550 GK18166-PA 42..164 197..329 159 33.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23921-PA 1955 GE23921-PA 1..1172 1..1173 5329 94.5 Plus

RE74545.hyp Sequence

Translation from 247 to 3786

> RE74545.hyp
MFGGAKPSFGATPAATSFGGFSGTTTTTPFGQSAFGKPAAPAFGNTSTFA
AQPAQQSLFGAAATPAQPAGGLFGANTSTGFGSTATAQPTAFGAFSQPQQ
TSNIFGSTQTAASTSLFGQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQ
PAAATSTTGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTA
VAKYQPTIGTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMC
GRKGPQAGNAPGAFGFGAQVTQPAQPASGGLFGSTAQPSTGLFGQTVTEN
KSMFGTTAFGQQPATNNAFGAATQQNNFLQKPFGATTTTPFAAPAADASN
PFGAKPAFGQGGSLFGQAPATSAAPAFGQTNTGFGGFGTTAGATQQSTLF
GATPAADPNKSAFGLGTAASAATTGFGFGAPATSTAGGGLFGNKPATSFA
APTFGATSTASTPFSNFGLNTSTAATGGGLFNSGLNKPATSGFGGFGATS
AAPLNFNAGNTGGSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGGLFGGGT
TSFGGVGGSLGGGGFGMGTNNSLTGGIMGAQPTLGIMTPSHQPIHQQILA
RVTSPYGDSPIFKDLKLSSEADATRATNPAAQQAVLDLTSNQYKISTSNN
PAPMKVKALGSTLNRKSLFDGLEEFDASVEGFNLKPSAKRLVIKPKVKSV
EGGNPSSSIGSAPNTPQSRPKGATPNKERESFSGAIPSEPLPPAGNSPGA
TNGRESQDNGRRESWLHPNNLEKVRQHNIQTGMDQGSPHNSTLNELVPRK
PLDTYRPSSTVRLSVSTIPENPFEDQSSTIARRETFTSQQANESVLSNRS
NEAEDSAANQSRLAIEAAAAEAADDESHPTGIVLRRVGYYTIPSLDDLRS
YLAEDGSCVVPNFTVGREGYGNVFFGKEMDVAGLNLDEIVHFRNKEIIIY
PDDENKPPIGQGLNRDAQVTLDQVWPLDKTKHEAIKDPQRLLEMDWEGKL
RRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGLGDSDEEDELPTDPKKAK
IATLEAQQRANAEKMTLNSLRQAQKISEDAARNLDPKALVAGVASGFRPM
DDTAEFLLMDKTQFFQAGGNSDFSMFDPPRQRPTITSPTAVLAQEMVGNE
AHKMQLMKSSFFVEDNAPEDEPMGRWIIS*

RE74545.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:39:56
Subject Length Description Subject Range Query Range Score Percent Strand
Nup98-96-PC 1179 CG10198-PC 1..1179 1..1179 6117 100 Plus
Nup98-96-PD 1960 CG10198-PD 1..1173 1..1173 6083 100 Plus
Nup98-96-PA 1960 CG10198-PA 1..1173 1..1173 6083 100 Plus
CG14712-PA 1266 CG14712-PA 573..1240 64..739 326 27 Plus
CG14712-PA 1266 CG14712-PA 649..1216 8..566 314 29 Plus
Nup214-PA 1711 CG3820-PA 1097..1624 2..585 289 27.7 Plus