BDGP Sequence Production Resources |
Search the DGRC for RE74585
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 745 |
Well: | 85 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9775-RA |
Protein status: | RE74585.pep: gold |
Preliminary Size: | 1646 |
Sequenced Size: | 1901 |
Gene | Date | Evidence |
---|---|---|
CG9775 | 2002-10-18 | Blastp of sequenced clone |
CG9775 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9775 | 2008-04-29 | Release 5.5 accounting |
CG9775 | 2008-08-15 | Release 5.9 accounting |
CG9775 | 2008-12-18 | 5.12 accounting |
1901 bp (1901 high quality bases) assembled on 2002-10-18
GenBank Submission: BT001747
> RE74585.complete GTCAGCCTGAAAAGCAGCGAGGAAAAACTTGAATTTCGTCTGTAAAACAT ATCTAATCGGAACCAAGCCACTGAAAAAGTCGTAGTTTAGGCTAAATAAA CGAGAAATCAACGAGTGAAACTAATTTCTATCTGTGGACAGAACGCCCCC GCACCTATTTTTGTGCTGAGGAACAAGCGAAGCAGCGACGCACAATTCAG AAATTTGCAAACCGGTTTTCGGCGCAGAAACACCCACTCGATCGTCCAAG AGTCAAGCGGAGAACAGTGAAAACATACATTATAAGGATCAATTTATAAA AGCAAAGCCGCAACAATCATGAACACTGGAATCTCCTTAAACGAGCGCTT TACGCAGATGCAGTCAAAGCAGCCGCCACAGGGACGCGGTCGCAGCCGCT CCAGGAGCAGGAGTCGCCGCATTGTGAGCAGCGGAGCCGGAAATCAAGGA ATGTCCGCGGTCAACTCTAGGCTGCTGAATGAATTCAAAAGGCTCCACAC CGTTCAGACGGCCCTCAAACTGAAGCGCAGAAGCTTACGGACCACCGCAG TCAGCGGTCGTGGACCACGCGTCGCCGGCGTCAAGTCGCTGCGACTGGCG CCCAACGGGAAGCCCATACGGTCCAACAACGTGACCAGGGTAGCAACGAT GCGTGCCGATCTAGTGGCAAGCGGCAATGCCGCACGCAATCGCCGCAGCG GCAGCAGCATGCGCAATGTCCCCGCCACTAACGGTGGTGGAGGCGGACTT CGGCAGCGGCTAGGACAGCGCCGCCCTTCTGTGGGCGGTGCCGCCGAGCG CGTTGAGCGTCGTCAGCGACAGCAGCAGCAAGCCCCACGAGGACGTTCCC GCTCTCAGTCCCGTTCGCGCCACCCGCAAATACAGCGTGTGGACAGAGCA CGTTCCCAAAGCCGTGGACGCAGCATTGGGCGTTCCCAGAGCCGCAATCG CGATCGCTCCGCCCAGGGCCGAGTTCCAGTGAAACAGCGGCTTTCAGTCA AGCACCGCCTTGGCGTGCGAACCGGCCAGAGAAACAACCAGGCCAAGATC CCACCGCAGCGCCGGGCACCAAGCCAAATTCGAGGTGTGGCAGGCGGACG GGTCGAGAAGCGTCGTAGTGCTCAGATTTCCCAAAAGAAGGGAGTTTCCG CCTCGATTGCCGGACGTCAAGGACGACCACGTAGAAGATCTGTTGCAAGA AACGCTGCTTCTAGCAGTGGGGCAGTTAACAATTCTGCTTCTGCTCGTCG CTCACGCTCGCGCAATCGTGCTGCCGCCGTCGCTGCTGCCGCTATCGCCG CTACTGTTCAGGGCCGGGCTAATCCTCGCCAGAGACGCGGACGCAGTGCA GGCGCTGCCAAGGGCAAGATCATCAGAAATGGTAAAGCTGACAAAAACGC GAAGGTCAAGGCGACAAACGGTGTCAAAAGTGGCCCGCAGCAACAGGTTC GACGGGGACGCAGTCGTAGTCGTAAGCCTACAGGCAAACCACAGCGTCCA GAGGTTAAGCGCGAGGATCTTGACATGGAACTGGATCAGTATATGTCCAC CACTAAGTCGGAGATGGACTACTTGCTGAAGTAAACACAAGTAGATTGGA CCACAAACTATTGAATTAAAAACAATTGAATGAACAGAATGTAACAACCA CCGGCTATAGGCAGATGTTTCTCTCGTTGCACTAAGTTACCGCCTAGTTT TAAAATATTTCTAAGTTTTAAACCATGTTAAAAGCGTCCAAAAAGAGCGC TTAGGCATAGAGATGTTCTCGTGTATATATGACAAGTTCTAATATAATAA GTAAATATGGTCGAGAATTGTATAGTTCATGAATGATATTGTTAATCGCA ATTCCGAAATACAAACTATTCATTGCTCAACTCAGAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9775-RA | 2108 | CG9775-RA | 121..2004 | 1..1884 | 9390 | 99.8 | Plus |
CG9775-RC | 1749 | CG9775-RC | 67..1749 | 202..1884 | 8385 | 99.8 | Plus |
CG9775-RD | 2552 | CG9775-RD | 1078..1918 | 648..1488 | 4190 | 99.8 | Plus |
CG9775-RD | 2552 | CG9775-RD | 95..622 | 1..528 | 2625 | 99.8 | Plus |
CG9775-RD | 2552 | CG9775-RD | 2046..2448 | 1482..1884 | 2000 | 99.7 | Plus |
CG9775-RD | 2552 | CG9775-RD | 883..1002 | 529..648 | 600 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 464728..465267 | 1187..648 | 2700 | 100 | Minus |
chr3R | 27901430 | chr3R | 463719..464121 | 1884..1482 | 2000 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 465723..466046 | 528..205 | 1605 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 464249..464551 | 1488..1186 | 1500 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 467039..467242 | 204..1 | 1020 | 100 | Minus |
chr3R | 27901430 | chr3R | 465343..465462 | 648..529 | 600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4639018..4639557 | 1187..648 | 2700 | 100 | Minus |
3R | 32079331 | 3R | 4638009..4638411 | 1884..1482 | 2000 | 99.8 | Minus |
3R | 32079331 | 3R | 4640013..4640336 | 528..205 | 1605 | 99.7 | Minus |
3R | 32079331 | 3R | 4638539..4638841 | 1488..1186 | 1500 | 99.7 | Minus |
3R | 32079331 | 3R | 4641329..4641532 | 204..1 | 1020 | 100 | Minus |
3R | 32079331 | 3R | 4639633..4639752 | 648..529 | 600 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4379849..4380388 | 1187..648 | 2700 | 100 | Minus |
3R | 31820162 | 3R | 4378840..4379242 | 1884..1482 | 2000 | 99.7 | Minus |
3R | 31820162 | 3R | 4380844..4381167 | 528..205 | 1605 | 99.6 | Minus |
3R | 31820162 | 3R | 4379370..4379672 | 1488..1186 | 1500 | 99.6 | Minus |
3R | 31820162 | 3R | 4382160..4382363 | 204..1 | 1020 | 100 | Minus |
3R | 31820162 | 3R | 4380464..4380583 | 648..529 | 600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 463718..464119 | 1484..1885 | 99 | <- | Minus |
chr3R | 464254..464549 | 1188..1483 | 100 | <- | Minus |
chr3R | 464728..465267 | 648..1187 | 100 | <- | Minus |
chr3R | 465344..465462 | 529..647 | 100 | <- | Minus |
chr3R | 465723..466046 | 205..528 | 99 | <- | Minus |
chr3R | 467039..467242 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RC | 1..1266 | 319..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RC | 1..1266 | 319..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 1..1266 | 319..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RC | 1..1266 | 319..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 1..1266 | 319..1584 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 20..1903 | 1..1885 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 64..1946 | 1..1883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 48..1930 | 1..1883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 20..1903 | 1..1885 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9775-RA | 48..1930 | 1..1883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4638008..4638409 | 1484..1885 | 99 | <- | Minus |
3R | 4638544..4638839 | 1188..1483 | 100 | <- | Minus |
3R | 4639018..4639557 | 648..1187 | 100 | <- | Minus |
3R | 4639634..4639752 | 529..647 | 100 | <- | Minus |
3R | 4640013..4640336 | 205..528 | 99 | <- | Minus |
3R | 4641329..4641532 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4638008..4638409 | 1484..1885 | 99 | <- | Minus |
3R | 4638544..4638839 | 1188..1483 | 100 | <- | Minus |
3R | 4639018..4639557 | 648..1187 | 100 | <- | Minus |
3R | 4639634..4639752 | 529..647 | 100 | <- | Minus |
3R | 4640013..4640336 | 205..528 | 99 | <- | Minus |
3R | 4641329..4641532 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4638008..4638409 | 1484..1885 | 99 | <- | Minus |
3R | 4638544..4638839 | 1188..1483 | 100 | <- | Minus |
3R | 4639018..4639557 | 648..1187 | 100 | <- | Minus |
3R | 4639634..4639752 | 529..647 | 100 | <- | Minus |
3R | 4640013..4640336 | 205..528 | 99 | <- | Minus |
3R | 4641329..4641532 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 463730..464131 | 1484..1885 | 99 | <- | Minus |
arm_3R | 464266..464561 | 1188..1483 | 100 | <- | Minus |
arm_3R | 464740..465279 | 648..1187 | 100 | <- | Minus |
arm_3R | 465356..465474 | 529..647 | 100 | <- | Minus |
arm_3R | 465735..466058 | 205..528 | 99 | <- | Minus |
arm_3R | 467051..467254 | 1..204 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4378839..4379240 | 1484..1885 | 99 | <- | Minus |
3R | 4379375..4379670 | 1188..1483 | 100 | <- | Minus |
3R | 4379849..4380388 | 648..1187 | 100 | <- | Minus |
3R | 4380465..4380583 | 529..647 | 100 | <- | Minus |
3R | 4380844..4381167 | 205..528 | 99 | <- | Minus |
3R | 4382160..4382363 | 1..204 | 100 | Minus |
Translation from 318 to 1583
> RE74585.hyp MNTGISLNERFTQMQSKQPPQGRGRSRSRSRSRRIVSSGAGNQGMSAVNS RLLNEFKRLHTVQTALKLKRRSLRTTAVSGRGPRVAGVKSLRLAPNGKPI RSNNVTRVATMRADLVASGNAARNRRSGSSMRNVPATNGGGGGLRQRLGQ RRPSVGGAAERVERRQRQQQQAPRGRSRSQSRSRHPQIQRVDRARSQSRG RSIGRSQSRNRDRSAQGRVPVKQRLSVKHRLGVRTGQRNNQAKIPPQRRA PSQIRGVAGGRVEKRRSAQISQKKGVSASIAGRQGRPRRRSVARNAASSS GAVNNSASARRSRSRNRAAAVAAAAIAATVQGRANPRQRRGRSAGAAKGK IIRNGKADKNAKVKATNGVKSGPQQQVRRGRSRSRKPTGKPQRPEVKRED LDMELDQYMSTTKSEMDYLLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9775-PE | 421 | CG9775-PE | 1..421 | 1..421 | 2079 | 100 | Plus |
CG9775-PC | 421 | CG9775-PC | 1..421 | 1..421 | 2079 | 100 | Plus |
CG9775-PA | 421 | CG9775-PA | 1..421 | 1..421 | 2079 | 100 | Plus |
CG9775-PD | 315 | CG9775-PD | 1..282 | 111..392 | 1378 | 99.3 | Plus |
CG9915-PC | 820 | CG9915-PC | 77..493 | 23..407 | 199 | 26.4 | Plus |
Translation from 318 to 1583
> RE74585.pep MNTGISLNERFTQMQSKQPPQGRGRSRSRSRSRRIVSSGAGNQGMSAVNS RLLNEFKRLHTVQTALKLKRRSLRTTAVSGRGPRVAGVKSLRLAPNGKPI RSNNVTRVATMRADLVASGNAARNRRSGSSMRNVPATNGGGGGLRQRLGQ RRPSVGGAAERVERRQRQQQQAPRGRSRSQSRSRHPQIQRVDRARSQSRG RSIGRSQSRNRDRSAQGRVPVKQRLSVKHRLGVRTGQRNNQAKIPPQRRA PSQIRGVAGGRVEKRRSAQISQKKGVSASIAGRQGRPRRRSVARNAASSS GAVNNSASARRSRSRNRAAAVAAAAIAATVQGRANPRQRRGRSAGAAKGK IIRNGKADKNAKVKATNGVKSGPQQQVRRGRSRSRKPTGKPQRPEVKRED LDMELDQYMSTTKSEMDYLLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18351-PA | 426 | GF18351-PA | 4..426 | 3..421 | 891 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11466-PA | 423 | GG11466-PA | 1..423 | 1..421 | 1461 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19526-PA | 451 | GH19526-PA | 2..169 | 1..160 | 349 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9775-PE | 421 | CG9775-PE | 1..421 | 1..421 | 2079 | 100 | Plus |
CG9775-PC | 421 | CG9775-PC | 1..421 | 1..421 | 2079 | 100 | Plus |
CG9775-PA | 421 | CG9775-PA | 1..421 | 1..421 | 2079 | 100 | Plus |
CG9775-PD | 315 | CG9775-PD | 1..282 | 111..392 | 1378 | 99.3 | Plus |
CG9915-PC | 820 | CG9915-PC | 77..493 | 23..407 | 199 | 26.4 | Plus |
CG9915-PB | 820 | CG9915-PB | 77..493 | 23..407 | 199 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23004-PA | 441 | GI23004-PA | 409..441 | 389..421 | 176 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21736-PA | 473 | GL21736-PA | 4..473 | 3..421 | 619 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22027-PA | 461 | GA22027-PA | 2..461 | 1..421 | 624 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10692-PA | 424 | GM10692-PA | 1..424 | 1..421 | 1614 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19666-PA | 413 | GD19666-PA | 1..413 | 1..421 | 1596 | 93.1 | Plus |
Dsim\GD23878-PA | 66 | GD23878-PA | 1..66 | 45..110 | 314 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24596-PA | 457 | GJ24596-PA | 2..298 | 1..276 | 392 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13464-PA | 425 | GK13464-PA | 2..425 | 1..421 | 608 | 49.6 | Plus |