BDGP Sequence Production Resources |
Search the DGRC for RE74757
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 747 |
Well: | 57 |
Vector: | pFlc-1 |
Associated Gene/Transcript | PsGEF-RB |
Protein status: | RE74757.pep: gold |
Preliminary Size: | 4602 |
Sequenced Size: | 2855 |
Gene | Date | Evidence |
---|---|---|
CG14045 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14045 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14045 | 2008-04-29 | Release 5.5 accounting |
CG14045 | 2008-04-29 | Picked prior to 5.5 |
CG14045 | 2008-08-15 | Release 5.9 accounting |
CG14045 | 2008-12-18 | 5.12 accounting |
CG14045 | 2011-03-01 | Transcript Validation |
2855 bp (2855 high quality bases) assembled on 2005-11-03
GenBank Submission: BT024192
> RE74757.complete ATTTTCCGTTTCTGAGCTCGTGCTAAGCAGACACGTGAACTTCATAGCAG AAAAGAACGAAAATACCTTTGGCTTGAAGAAATTAGTTGGCTTATTTTTT TTTTCGTGTAAAAGATCTATCAAAATTTGTGTGCCGCCGACGCGCAAGGA TCACATTTTTAAACAAAATCAGTGCTGTTAATCAAGTTGAACCTAAGCTA AATCGAGTTGCAGTTCGCCAGGCGACGTAGTCGCAAAAAGATCAAGTTAC CAGTAGGGACATGCCAACCATGACACGGATGCATCGCCACTCCAGTTCCA GTGCCGTGGTGGAGGAGTCGCGTGGCCGGCGCCGTGGAGTGGGCGTGCCA GGAGTCGGAGACGCGAACAAGGAGAATTTCGGGGTGCACTTCATGAGCAG TCCCTTCGGCAATGCCAGTTTGATTGCCCTGCAGGATTTGAGCAACGTGC ACGGAAAGAGTCCGCAGCGCAGGAGTTTCAGCGAGGGCAGTGGTCCGCGG CAGGCCACGCCACAATTGGCGGCACTGCGCTGCTTGCCACGCACCACCGG TGGTGCAGTTGCTCTGGAGGATTCTCAGCTCTCCTCATCGCGAATGGGCG ATACCACACTGGACCGCATGCTGGATGCCATCATAGAGTCGGCCAGGAAG GAGGTGAGGTGTACGAAGACACTGCCAGGCGCCGGCGCCACCACTTCGAC CACCATTTTGGCGGATAATGCCGAGTGGAGCGAGACCAGTGTCCACGAAA TGGAGGTGCGCACGCCCACCCACTTGAAGCGGCAGCGGGTGGTGCGGCGC AAGAACCCACACAAGACTACCACCATTAACCAAACGCAAAGTCACCAAGC CAAGAAGTTGGAGCCACTGCAGTTGGTTCCCAGCACCAAACGCTGCCTGA GCTTCTCATCCAGTTCCGCCTCGAGTGATTTGGACGAGGATGAGCAGCAG GTGGCCAAGAGGAGTTCGCTGGCCTCCCCCACCACCACACCTCCCTCCCA CTGCACCACCACCACCAGCAGCATCAGCAGCAGCAGCAGCAGTAATGGTG GTGCGGACATGGAGGCCAGTCAGCGGGGCAGCATCGATGTGAGCATCGCA TTCGATGCCAAGGAGCAGCAACTTAATGTACATGTGATTCGCTGTCGCGA CTTGCAGCGCTCCCATGGCAGTGGAAACGGCAGCATCAACGCCTACGTCA AGGTGGCCCTGTCCGGAGGAGCCCAGCCACCCGGATACGGTGGCCACTCG TCGGGGGGAAGCATGAGTTCCGGGTACCAACGCACCGCCGTCCATCGGCA CTCGGGCCGCCCGTACTTCGATCAGCGATTCAACTTCCAGATTTCCAGTG GCGAGGAGACCGCTGGACAGTATCTTCAGTTGGCCGTGTGGCATCGGGAT CGCCATTTAAAACGCAGCGAGTTCCTGGGCTGCAGCACTTTTCCACTGAA TGAGTTAGTGCATCCGGATTCGGGCGTCTCGGCAGGATCCTACAAGCTGC ATGCACAGGCATGTCCTCCGCCTACTAGCCGCCATAGCCAACCAAAAGCC AACGCAGGCCAGGATCAAAAGCAGGAAACGGAAGCGGCGAAGGATCAGGA TAAACAGCAGGACGATTCCCCCGCAGAAATGGCAGCAGCCGTCACAGTCA CGCCCCAAAAACCGGTTGCCACTGGATCCGGTTCGGGATCGAATTCCGCA GCGATGGCACTGAACGACGAGGTGATCAGCATTAGCATCGATAGCATGGG CAAAGAGGATCCTCTGCTACCCCAGCAGCCCCAGCAGCCCATGAAGCTCA GCAAGAAGGCACTCCACCAGCGAGATGCCGACGAGAATCTCTTTTTAAGA TTCCTGGAGCTGGATCCGCCAGCGGATGGCAATGCAAACAGTACCACCAC CCAGGCACAAGCGACGGGCTCCCAGTCCTCGGCGTCGAAGGCCAACGAAA GCAATGCCAACCACTTGAACAATGGGACATCCGGTGGACGCAGACAGTCC ACCATGCCAAATAGCGGAGGATCTAGCGTAGGAGGCGCTGTCCGCCAGCA GCAGGGACGTACCCCATTCACCATGACGAAAAGACTTACGCGAACCGAGG AACGGGGCTTTGGATTCTCTATTGTCTGGACGCATCCGCCACGGGTGGAG AAAATCGAGGCGGGACTCTCGGCCGATCGGTGTGGCATTTTGCCCGGCGA CTATGTGATCTTTGTGGACAAGCATAACGTCGTCACGATGCCCGAGGCTG ATGTTCTGAATTTGATACGATCGCAGGGCTCGTCCTTGACGTTGGAGATA TTCAGAAGGTCAGGCGCGGGCGCCACAACAATCACGTCGACGGACTTGGG CCAGAACAATGTACACATAAGCACCAGATTGGGCGCGGCAGTGGGCTTGG GCAGCGAGGAGCACACCCTGGCCACCACCGCAACAGGAACGACCACCGTA ATGAGTCTGCAAAGGACCACCAGTACGAGGATCCAGCCATTGGCAAATAG CATGAGCCGGCCGGCTACCGCATGCTCGGGAACCACCTCCTCCATCGAGG CGGCCAAAAGGAGGCTTCACCTGCCACAGGTCACCTTCAGCAAGGAGGTA GGCAAAGGTGTCTTCGTCTAAGGATTATTATTTTTTGCTTTGATTCATTT CGTGTCTTTGTGTACATACTAATTTGTTAAGTTTAAGAGATTAAGTTATC GCGCCATGCTGGTTATCATTACGACTACCTAATTATTTATCCTTTTTTTT TGCCTAGCCTAGGCCTCTATTTTGTTTGAGAGTCCTTAAGCTTCGTGCGA CTTCGCTACGCTTGACAATAAACTTTTTTTTTCGATCCCAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PsGEF-RB | 2886 | PsGEF-RB | 1..2840 | 3..2842 | 14200 | 100 | Plus |
PsGEF.a | 5261 | PsGEF.a | 2..1410 | 3..1411 | 7045 | 100 | Plus |
PsGEF-RA | 4861 | PsGEF-RA | 2..1410 | 3..1411 | 7045 | 100 | Plus |
PsGEF.a | 5261 | PsGEF.a | 1516..2704 | 1409..2597 | 5945 | 100 | Plus |
PsGEF-RA | 4861 | PsGEF-RA | 1516..2704 | 1409..2597 | 5945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2274453..2275880 | 2839..1412 | 7140 | 100 | Minus |
chrX | 22417052 | chrX | 2278789..2279672 | 1134..251 | 4420 | 100 | Minus |
chrX | 22417052 | chrX | 2278175..2278452 | 1411..1134 | 1390 | 100 | Minus |
chrX | 22417052 | chrX | 2281349..2281598 | 253..3 | 1205 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 2380514..2381944 | 2842..1412 | 7155 | 100 | Minus |
X | 23542271 | X | 2384853..2385736 | 1134..251 | 4420 | 100 | Minus |
X | 23542271 | X | 2384239..2384516 | 1411..1134 | 1390 | 100 | Minus |
X | 23542271 | X | 2387413..2387663 | 253..3 | 1255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 2388612..2390042 | 2842..1412 | 7155 | 100 | Minus |
X | 23527363 | X | 2392951..2393834 | 1134..251 | 4420 | 100 | Minus |
X | 23527363 | X | 2392337..2392614 | 1411..1134 | 1390 | 100 | Minus |
X | 23527363 | X | 2395511..2395761 | 253..3 | 1255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2274453..2275880 | 1412..2839 | 100 | <- | Minus |
chrX | 2278175..2278451 | 1135..1411 | 100 | <- | Minus |
chrX | 2278789..2279669 | 254..1134 | 96 | <- | Minus |
chrX | 2281349..2281599 | 1..253 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14045-RA | 1..1155 | 261..1417 | 99 | -> | Plus |
CG14045-RA | 1266..2445 | 1418..2597 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PsGEF-RB | 1..2361 | 261..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PsGEF-RB | 1..2361 | 261..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14045-RA | 1..1155 | 261..1417 | 99 | -> | Plus |
CG14045-RA | 1266..2445 | 1418..2597 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PsGEF-RB | 1..2361 | 261..2621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14045-RA | 2..1414 | 3..1417 | 99 | -> | Plus |
CG14045-RA | 1525..2704 | 1418..2597 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PsGEF-RB | 1..2837 | 3..2839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PsGEF-RB | 2..2838 | 3..2839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14045-RA | 2..1414 | 3..1417 | 99 | -> | Plus |
CG14045-RA | 1525..2704 | 1418..2597 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PsGEF-RB | 2..2838 | 3..2839 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2380517..2381944 | 1412..2839 | 100 | <- | Minus |
X | 2384239..2384515 | 1135..1411 | 100 | <- | Minus |
X | 2384853..2385733 | 254..1134 | 100 | <- | Minus |
X | 2387413..2387664 | 1..253 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2380517..2381944 | 1412..2839 | 100 | <- | Minus |
X | 2384239..2384515 | 1135..1411 | 100 | <- | Minus |
X | 2384853..2385733 | 254..1134 | 100 | <- | Minus |
X | 2387413..2387664 | 1..253 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2380517..2381944 | 1412..2839 | 100 | <- | Minus |
X | 2384239..2384515 | 1135..1411 | 100 | <- | Minus |
X | 2384853..2385733 | 254..1134 | 100 | <- | Minus |
X | 2387413..2387664 | 1..253 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2278272..2278548 | 1135..1411 | 100 | <- | Minus |
arm_X | 2274550..2275977 | 1412..2839 | 100 | <- | Minus |
arm_X | 2278886..2279766 | 254..1134 | 100 | <- | Minus |
arm_X | 2281446..2281697 | 1..253 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2388615..2390042 | 1412..2839 | 100 | <- | Minus |
X | 2392337..2392613 | 1135..1411 | 100 | <- | Minus |
X | 2392951..2393831 | 254..1134 | 100 | <- | Minus |
X | 2395511..2395762 | 1..253 | 99 | Minus |
Translation from 260 to 2620
> RE74757.pep MPTMTRMHRHSSSSAVVEESRGRRRGVGVPGVGDANKENFGVHFMSSPFG NASLIALQDLSNVHGKSPQRRSFSEGSGPRQATPQLAALRCLPRTTGGAV ALEDSQLSSSRMGDTTLDRMLDAIIESARKEVRCTKTLPGAGATTSTTIL ADNAEWSETSVHEMEVRTPTHLKRQRVVRRKNPHKTTTINQTQSHQAKKL EPLQLVPSTKRCLSFSSSSASSDLDEDEQQVAKRSSLASPTTTPPSHCTT TTSSISSSSSSNGGADMEASQRGSIDVSIAFDAKEQQLNVHVIRCRDLQR SHGSGNGSINAYVKVALSGGAQPPGYGGHSSGGSMSSGYQRTAVHRHSGR PYFDQRFNFQISSGEETAGQYLQLAVWHRDRHLKRSEFLGCSTFPLNELV HPDSGVSAGSYKLHAQACPPPTSRHSQPKANAGQDQKQETEAAKDQDKQQ DDSPAEMAAAVTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKED PLLPQQPQQPMKLSKKALHQRDADENLFLRFLELDPPADGNANSTTTQAQ ATGSQSSASKANESNANHLNNGTSGGRRQSTMPNSGGSSVGGAVRQQQGR TPFTMTKRLTRTEERGFGFSIVWTHPPRVEKIEAGLSADRCGILPGDYVI FVDKHNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLGQNN VHISTRLGAAVGLGSEEHTLATTATGTTTVMSLQRTTSTRIQPLANSMSR PATACSGTTSSIEAAKRRLHLPQVTFSKEVGKGVFV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21954-PA | 1600 | GF21954-PA | 1..871 | 1..779 | 2181 | 62.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12617-PA | 1526 | GG12617-PA | 1..812 | 1..779 | 3370 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12812-PA | 1744 | GH12812-PA | 68..971 | 1..779 | 1934 | 54.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PsGEF-PB | 786 | CG43947-PB | 1..786 | 1..786 | 4019 | 100 | Plus |
PsGEF-PI | 1403 | CG43947-PI | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PH | 2006 | CG43947-PH | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PG | 2033 | CG43947-PG | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PF | 2738 | CG43947-PF | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PC | 1493 | CG43947-PC | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PE | 2777 | CG43947-PE | 1..815 | 1..779 | 3937 | 95.6 | Plus |
PsGEF-PA | 1529 | CG43947-PA | 1..815 | 1..779 | 3937 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15915-PA | 1617 | GI15915-PA | 1..886 | 1..779 | 2015 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26907-PA | 1195 | GL26907-PA | 450..772 | 486..779 | 860 | 56.2 | Plus |
Dper\GL26907-PA | 1195 | GL26907-PA | 1..147 | 1..131 | 461 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22665-PA | 1612 | GA22665-PA | 1..867 | 1..779 | 1966 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18882-PA | 1600 | GM18882-PA | 1..815 | 1..779 | 3547 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24610-PA | 247 | GD24610-PA | 1..247 | 112..354 | 1223 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16822-PA | 1584 | GJ16822-PA | 1..848 | 1..779 | 2014 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16211-PA | 1544 | GK16211-PA | 20..837 | 1..779 | 2056 | 59.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16949-PA | 1504 | GE16949-PA | 1..774 | 4..779 | 3251 | 89.1 | Plus |
Translation from 260 to 2620
> RE74757.hyp MPTMTRMHRHSSSSAVVEESRGRRRGVGVPGVGDANKENFGVHFMSSPFG NASLIALQDLSNVHGKSPQRRSFSEGSGPRQATPQLAALRCLPRTTGGAV ALEDSQLSSSRMGDTTLDRMLDAIIESARKEVRCTKTLPGAGATTSTTIL ADNAEWSETSVHEMEVRTPTHLKRQRVVRRKNPHKTTTINQTQSHQAKKL EPLQLVPSTKRCLSFSSSSASSDLDEDEQQVAKRSSLASPTTTPPSHCTT TTSSISSSSSSNGGADMEASQRGSIDVSIAFDAKEQQLNVHVIRCRDLQR SHGSGNGSINAYVKVALSGGAQPPGYGGHSSGGSMSSGYQRTAVHRHSGR PYFDQRFNFQISSGEETAGQYLQLAVWHRDRHLKRSEFLGCSTFPLNELV HPDSGVSAGSYKLHAQACPPPTSRHSQPKANAGQDQKQETEAAKDQDKQQ DDSPAEMAAAVTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKED PLLPQQPQQPMKLSKKALHQRDADENLFLRFLELDPPADGNANSTTTQAQ ATGSQSSASKANESNANHLNNGTSGGRRQSTMPNSGGSSVGGAVRQQQGR TPFTMTKRLTRTEERGFGFSIVWTHPPRVEKIEAGLSADRCGILPGDYVI FVDKHNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLGQNN VHISTRLGAAVGLGSEEHTLATTATGTTTVMSLQRTTSTRIQPLANSMSR PATACSGTTSSIEAAKRRLHLPQVTFSKEVGKGVFV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PsGEF-PB | 786 | CG43947-PB | 1..786 | 1..786 | 4019 | 100 | Plus |
PsGEF-PI | 1403 | CG43947-PI | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PH | 2006 | CG43947-PH | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PG | 2033 | CG43947-PG | 1..779 | 1..779 | 3984 | 100 | Plus |
PsGEF-PF | 2738 | CG43947-PF | 1..779 | 1..779 | 3984 | 100 | Plus |