BDGP Sequence Production Resources |
Search the DGRC for RE74917
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 749 |
Well: | 17 |
Vector: | pFlc-1 |
Associated Gene/Transcript | tobi-RA |
Protein status: | RE74917.pep: gold |
Preliminary Size: | 1988 |
Sequenced Size: | 2111 |
Gene | Date | Evidence |
---|---|---|
CG11909 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11909 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11909 | 2008-04-29 | Release 5.5 accounting |
CG11909 | 2008-08-15 | Release 5.9 accounting |
CG11909 | 2008-12-18 | 5.12 accounting |
2111 bp (2111 high quality bases) assembled on 2005-10-24
GenBank Submission: BT023924
> RE74917.complete AGTCGTGTTGTGAGAAAGGCACGAAAATGAGGTTTATTTTACTATCCCTG CTGTTGGCATCCTTCTGCCTCTGGGAGGCGGTTCACACTTGTGCCAGCAT CGAGCAGCGCTACAAGTTTCCCAATAGCAATGTCTACGTGCGACTTAGGA GAGGTGATAAGTTGCAGTATGAGCTAATGAAGGGCGAGAAGTCCCTGCAG ACGGTGACCTTCGACAACTTTGACAGCAGCGCCAATCTGGTGGAGACGAG CAGTGGTAGCTACCAGCTTACCGATGGCCAATCCACCGTGGAGTTCACCC TGGTCAAAAGCGGAGTGGTTGCCGGCACAGGCAGTGAGATAACCCATGTG AAAGTATCCCGAGATCAGGTGCTGCAAGGCACCCAACCCAGGGATTGCGT CCCCCTGAAGACCGGATCGACGCACTGGTTCAGTGGTCCGGAGCAGAAGC AACACTACTGGCCAGTGGAGCGACAGAGGCATAGTAACTATTCCTACCTG CCAAAGGAGCTGGATAACTTTGGTGTGGGTGAGCGATATTGGTTGAACGG CGACGGAGTCTTTTTGTACGTGGAGAGCAACACTCCTCTGTTTATTGATC AGAATAGTGCTGCCTATCCTGACCAGCTGTGTCTGAGTGCTATTAGTGCT CTACCCTATGATCCTCGGGTGACCTCTGCCAAATTCGTTTACCACGTAGC TGTGGCCAAGGATGCCAAGGCGGCGCACCGGTATGCCGTTAAAACGTTCC TCGGCCAACCCACAGGCTATCCCGATGAGCGAATGGTCATGCATCCTGTG TGGTCCACATGGGCTCTCTACAAGGCTGAGGTATCCGACGATGTGGTTCG TGACTTCGCCAAGCAGATTCTGGATAATGGGTTCAACAACAGCCAGCTGG AAATCGACGATGATTGGGAGGATTGCTATGGAGCCATGACCTTCAGGAAG AACAAGTTCCCCGATAGCAAGACCCTGACTGATGACCTCAAGGCCTTGGG TTTCCGTGTGACCCTGTGGATTCATCCATTCATTAACAACAACTGCACAG CCATTTACGATGAAGCTAAGTCTAAGGGTTACCTGGTGCTCGATCACGAG GGAAGCTCCGACACGCAATGGTGGAACAGCAAGCCCAAGGATGCAGCCAT TTTGGACTTTACCAAAACTGAGGTTCAGGAGTGGTTCAGCAAGCGTTTAA AGCGCCTTCAGGATGAGGATGGCATTGATAGCTTCAAGTTTGATGCCGGA GAGACCAGTTGGCTACCCAGTGATCCTGTACTCCAGGCTAGCAGTTCCAT GGTGACACCACTGCAGGCGGTGGGCGACTACGTGCGTACTGTAGCGGCAT TCGGAGACATGGTGGAGGTTCGATCAGCCCAGAACACTCAAGATCAGCCA ATCTTCGTGCGCATCGTGGACAAGGACTCCGAATGGGGATGGAACAACGG CCTGCTCACACTGATCTCTTCGATGCTGCAAATGAACCTCAACGGTTATC CTTTCGTCCTTCCCGATATGATTGGTGGTAATGGCTACTACGAAAAGCCA CCAACCAAGGAGCTTTTCCTCCGTTGGCTGCAGGCCAACGTCTTTATGCC CGCCCTGCAGTTCTCCTTCGTTCCCTGGAACTTTGACGACGAGGCCATTG CGATCAGCAAGAACTTCACCGCCCTCCATGCCACCTATACACCTTACATT ATGAAGCTCTTTAAGCGCGCTGTGGATTCTGGTGAACCTGTGAATGTTCC CCTCTGGTGGATCGCCCCGACTGATGAGGTGGCGCAGTCTATCTATGATG AGTTCCTTTTGGGCGAAGACATCATCGCTGCTCCCGTTGTGGTCGAGGGC GCCACCAAGCGAGACATTTACCTGCCAGAGGGCGAGTGGCAGGATGGAAA CAGCGACCAGGTGTACACTGGACCCACCTGGGTGATGGACTACGCCGCTC CCTTGGATACCCTACCCTACTTTTTGCGCGTGGGATTCACACTGGAGTAG AGCGGAAACCGTTTTATATATCTAAACTTCCTAGCGTGTATATTTAAAAA AAAAACAGAAGACGAACAAACTTAATAAAGTTAAATAATTATAACAAAAA AAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21167865..21168159 | 1801..2095 | 100 | <- | Minus |
chr3R | 21168217..21170016 | 1..1800 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11909-RA | 1..1974 | 27..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tobi-RA | 1..1974 | 27..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tobi-RA | 1..1974 | 27..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11909-RA | 1..1974 | 27..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tobi-RA | 1..1974 | 27..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11909-RA | 1..2000 | 1..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tobi-RA | 1..2095 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tobi-RA | 10..2104 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11909-RA | 1..2000 | 1..2000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tobi-RA | 10..2104 | 1..2095 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25344761..25345055 | 1801..2095 | 100 | <- | Minus |
3R | 25345113..25346912 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25344761..25345055 | 1801..2095 | 100 | <- | Minus |
3R | 25345113..25346912 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25344761..25345055 | 1801..2095 | 100 | <- | Minus |
3R | 25345113..25346912 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21170483..21170777 | 1801..2095 | 100 | <- | Minus |
arm_3R | 21170835..21172634 | 1..1800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25085592..25085886 | 1801..2095 | 100 | <- | Minus |
3R | 25085944..25087743 | 1..1800 | 100 | Minus |
Translation from 2 to 1999
> RE74917.hyp SCCEKGTKMRFILLSLLLASFCLWEAVHTCASIEQRYKFPNSNVYVRLRR GDKLQYELMKGEKSLQTVTFDNFDSSANLVETSSGSYQLTDGQSTVEFTL VKSGVVAGTGSEITHVKVSRDQVLQGTQPRDCVPLKTGSTHWFSGPEQKQ HYWPVERQRHSNYSYLPKELDNFGVGERYWLNGDGVFLYVESNTPLFIDQ NSAAYPDQLCLSAISALPYDPRVTSAKFVYHVAVAKDAKAAHRYAVKTFL GQPTGYPDERMVMHPVWSTWALYKAEVSDDVVRDFAKQILDNGFNNSQLE IDDDWEDCYGAMTFRKNKFPDSKTLTDDLKALGFRVTLWIHPFINNNCTA IYDEAKSKGYLVLDHEGSSDTQWWNSKPKDAAILDFTKTEVQEWFSKRLK RLQDEDGIDSFKFDAGETSWLPSDPVLQASSSMVTPLQAVGDYVRTVAAF GDMVEVRSAQNTQDQPIFVRIVDKDSEWGWNNGLLTLISSMLQMNLNGYP FVLPDMIGGNGYYEKPPTKELFLRWLQANVFMPALQFSFVPWNFDDEAIA ISKNFTALHATYTPYIMKLFKRAVDSGEPVNVPLWWIAPTDEVAQSIYDE FLLGEDIIAAPVVVEGATKRDIYLPEGEWQDGNSDQVYTGPTWVMDYAAP LDTLPYFLRVGFTLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tobi-PA | 657 | CG11909-PA | 1..657 | 9..665 | 3515 | 100 | Plus |
CG33080-PD | 725 | CG33080-PD | 167..719 | 126..660 | 530 | 27 | Plus |
CG33080-PB | 725 | CG33080-PB | 167..719 | 126..660 | 530 | 27 | Plus |
CG33080-PC | 844 | CG33080-PC | 286..838 | 126..660 | 530 | 27 | Plus |
CG33080-PA | 925 | CG33080-PA | 367..919 | 126..660 | 530 | 27 | Plus |
Translation from 26 to 1999
> RE74917.pep MRFILLSLLLASFCLWEAVHTCASIEQRYKFPNSNVYVRLRRGDKLQYEL MKGEKSLQTVTFDNFDSSANLVETSSGSYQLTDGQSTVEFTLVKSGVVAG TGSEITHVKVSRDQVLQGTQPRDCVPLKTGSTHWFSGPEQKQHYWPVERQ RHSNYSYLPKELDNFGVGERYWLNGDGVFLYVESNTPLFIDQNSAAYPDQ LCLSAISALPYDPRVTSAKFVYHVAVAKDAKAAHRYAVKTFLGQPTGYPD ERMVMHPVWSTWALYKAEVSDDVVRDFAKQILDNGFNNSQLEIDDDWEDC YGAMTFRKNKFPDSKTLTDDLKALGFRVTLWIHPFINNNCTAIYDEAKSK GYLVLDHEGSSDTQWWNSKPKDAAILDFTKTEVQEWFSKRLKRLQDEDGI DSFKFDAGETSWLPSDPVLQASSSMVTPLQAVGDYVRTVAAFGDMVEVRS AQNTQDQPIFVRIVDKDSEWGWNNGLLTLISSMLQMNLNGYPFVLPDMIG GNGYYEKPPTKELFLRWLQANVFMPALQFSFVPWNFDDEAIAISKNFTAL HATYTPYIMKLFKRAVDSGEPVNVPLWWIAPTDEVAQSIYDEFLLGEDII AAPVVVEGATKRDIYLPEGEWQDGNSDQVYTGPTWVMDYAAPLDTLPYFL RVGFTLE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18086-PA | 659 | GF18086-PA | 1..659 | 1..657 | 3207 | 88.6 | Plus |
Dana\GF21469-PA | 945 | GF21469-PA | 387..939 | 118..652 | 530 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12250-PA | 657 | GG12250-PA | 1..657 | 1..657 | 3446 | 97 | Plus |
Dere\GG18476-PA | 935 | GG18476-PA | 377..929 | 118..652 | 540 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19352-PA | 651 | GH19352-PA | 1..651 | 1..657 | 2667 | 73.1 | Plus |
Dgri\GH11967-PA | 955 | GH11967-PA | 313..949 | 57..652 | 543 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tobi-PA | 657 | CG11909-PA | 1..657 | 1..657 | 3515 | 100 | Plus |
CG33080-PD | 725 | CG33080-PD | 167..719 | 118..652 | 530 | 27 | Plus |
CG33080-PB | 725 | CG33080-PB | 167..719 | 118..652 | 530 | 27 | Plus |
CG33080-PC | 844 | CG33080-PC | 286..838 | 118..652 | 530 | 27 | Plus |
CG33080-PA | 925 | CG33080-PA | 367..919 | 118..652 | 530 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22561-PA | 652 | GI22561-PA | 20..652 | 18..657 | 2628 | 75.2 | Plus |
Dmoj\GI14708-PA | 943 | GI14708-PA | 276..937 | 1..652 | 522 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12508-PA | 658 | GL12508-PA | 5..657 | 4..656 | 2971 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11275-PA | 658 | GA11275-PA | 5..657 | 4..656 | 2973 | 83.8 | Plus |
Dpse\GA17264-PA | 955 | GA17264-PA | 397..949 | 118..652 | 534 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17717-PA | 371 | GM17717-PA | 59..371 | 341..657 | 1416 | 85.8 | Plus |
Dsec\GM12624-PA | 922 | GM12624-PA | 364..916 | 118..652 | 532 | 27.1 | Plus |
Dsec\GM17717-PA | 371 | GM17717-PA | 1..127 | 1..135 | 414 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18201-PA | 657 | GD18201-PA | 1..657 | 1..657 | 3495 | 98.9 | Plus |
Dsim\GD16241-PA | 809 | GD16241-PA | 167..584 | 118..519 | 324 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23750-PA | 653 | GJ23750-PA | 9..653 | 7..657 | 2735 | 75.6 | Plus |
Dvir\GJ16771-PA | 928 | GJ16771-PA | 370..922 | 118..652 | 518 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14321-PA | 661 | GK14321-PA | 7..661 | 5..657 | 2722 | 74.4 | Plus |
Dwil\GK13813-PA | 669 | GK13813-PA | 12..665 | 8..657 | 2446 | 67.3 | Plus |
Dwil\GK10238-PA | 939 | GK10238-PA | 381..933 | 118..652 | 549 | 27.4 | Plus |