Clone RH01460 Report

Search the DGRC for RH01460

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:14
Well:60
Vector:pFlc-1
Associated Gene/TranscriptninaE-RA
Protein status:RH01460.pep: gold
Preliminary Size:1579
Sequenced Size:1559

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4550 2002-01-01 Sim4 clustering to Release 2
CG4550 2003-08-11 Blastp of sequenced clone
ninaE 2008-04-29 Release 5.5 accounting
ninaE 2008-08-15 Release 5.9 accounting
ninaE 2008-12-18 5.12 accounting

Clone Sequence Records

RH01460.complete Sequence

1559 bp (1559 high quality bases) assembled on 2003-08-11

GenBank Submission: BT010221

> RH01460.complete
GGCAGGTTTCCAACGACCAATCGCCGCGACTAGTCCGCCCCAGTGAAATA
TTCAGAATCCAGGAACCCTTTATGTAAAAAGTGTTAGAAATATTGTTAGT
GAATTTGCAGCTTTTTATGTAGACAGTGTGATATAGGCGGGATATAGTGA
CGCAGCCAGTAACCAAAACACAATGGAGAGCTTTGCAGTAGCAGCCGCGC
AACTGGGGCCACACTTTGCCCCCCTGTCCAATGGATCGGTGGTGGACAAG
GTCACGCCCGACATGGCCCACCTGATCAGCCCGTACTGGAACCAGTTCCC
CGCCATGGACCCCATTTGGGCCAAGATCCTGACCGCCTACATGATCATGA
TCGGCATGATTTCCTGGTGCGGAAATGGCGTGGTGATCTACATATTCGCC
ACCACCAAATCACTGCGCACGCCCGCTAACCTGCTGGTCATCAACCTGGC
CATCTCCGACTTTGGCATCATGATCACAAACACGCCCATGATGGGCATAA
ATCTGTATTTCGAGACCTGGGTGCTCGGACCCATGATGTGCGACATATAC
GCCGGACTGGGCTCGGCCTTTGGCTGCAGCTCCATCTGGTCCATGTGCAT
GATCTCCCTGGATCGCTACCAAGTGATCGTCAAGGGCATGGCCGGCCGGC
CGATGACCATTCCGCTGGCCCTGGGCAAGATTGCCTACATCTGGTTCATG
TCGAGCATTTGGTGCCTGGCGCCCGCCTTCGGCTGGAGCAGGTATGTGCC
GGAGGGTAACCTGACCTCGTGCGGTATTGACTACTTGGAACGCGACTGGA
ACCCACGCTCATACCTGATCTTCTACTCCATCTTCGTGTACTATATTCCG
CTGTTCCTGATCTGCTACTCTTACTGGTTCATCATTGCTGCTGTCTCCGC
CCACGAGAAGGCCATGCGCGAGCAGGCCAAGAAGATGAATGTCAAGTCCC
TCCGCTCCTCTGAGGATGCCGAGAAGAGCGCCGAGGGCAAGCTGGCCAAG
GTGGCTCTGGTCACCATCACGCTGTGGTTCATGGCGTGGACACCATACCT
GGTCATCAACTGCATGGGACTGTTCAAGTTCGAGGGCCTTACACCACTGA
ATACCATTTGGGGAGCTTGCTTCGCCAAATCGGCCGCCTGCTACAATCCA
ATTGTATACGGCATCAGCCATCCGAAATATCGCCTGGCCCTCAAGGAGAA
GTGTCCTTGCTGCGTCTTTGGCAAGGTCGACGATGGCAAATCGAGCGATG
CCCAATCGCAGGCCACCGCCAGCGAGGCCGAGTCCAAGGCATAAATTCTT
TGGCGCAACAACCAGAACAGCAACAACAACAACAAGAACATCTAACTACT
TACAACAGCAACAACAACAGCAACAAAAACAACAGCAAGAACAACTGCAG
CAACAGAACGAAACGCTTTCGAATAACATCAAAAACTTCAACAATAATGA
AAAAATTATGCAACTTTCTTACATAACAAAAAGCAATGTAAACTCAGTTA
TTAAATTTCCTGCAATGTCAGTTAAGGACAAAAAAAAACTCAACAAAAAA
AAAAAAAAA

RH01460.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:31:22
Subject Length Description Subject Range Query Range Score Percent Strand
ninaE-RA 1638 ninaE-RA 41..1595 2..1556 7760 99.9 Plus
Rh2-RA 1377 Rh2-RA 713..1140 797..1224 730 78 Plus
Rh2-RA 1377 Rh2-RA 427..552 511..636 225 78.5 Plus
Rh6-RB 1644 Rh6-RB 1072..1112 899..939 160 92.6 Plus
Rh6-RB 1644 Rh6-RB 854..913 727..786 150 83.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15711321..15711885 743..179 2810 99.8 Minus
chr3R 27901430 chr3R 15710230..15710602 1538..1166 1865 100 Minus
chr3R 27901430 chr3R 15710669..15710946 1167..890 1390 100 Minus
chr3R 27901430 chr3R 15711947..15712125 180..2 895 100 Minus
chr3R 27901430 chr3R 15711004..15711154 890..740 755 100 Minus
chr3R 27901430 chr3R 14723777..14724573 368..1164 730 72.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:17:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19887397..19887961 743..179 2825 100 Minus
3R 32079331 3R 19886283..19886673 1556..1166 1940 99.7 Minus
3R 32079331 3R 19886740..19887017 1167..890 1390 100 Minus
3R 32079331 3R 19888023..19888201 180..2 895 100 Minus
3R 32079331 3R 19887075..19887225 890..740 755 100 Minus
3R 32079331 3R 18899790..18900586 368..1164 745 72.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 19628228..19628792 743..179 2825 100 Minus
3R 31820162 3R 19627114..19627504 1556..1166 1940 99.7 Minus
3R 31820162 3R 19627571..19627848 1167..890 1390 100 Minus
3R 31820162 3R 19628854..19629032 180..2 895 100 Minus
3R 31820162 3R 19627906..19628056 890..740 755 100 Minus
3R 31820162 3R 18641050..18641417 797..1164 655 78.5 Plus
3R 31820162 3R 18640764..18640889 511..636 225 78.5 Plus
3R 31820162 3R 18640621..18640715 368..462 160 77.8 Plus
3R 31820162 3R 15224890..15224930 899..939 160 92.6 Plus
3R 31820162 3R 15224672..15224731 727..786 150 83.3 Plus
Blast to na_te.dros performed on 2019-03-15 20:18:52 has no hits.

RH01460.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:19:50 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15710223..15710362 1406..1544 99 == Minus
chr3R 15710463..15710600 1168..1305 100 <- Minus
chr3R 15710669..15710946 890..1167 100 <- Minus
chr3R 15711005..15711152 742..889 100 <- Minus
chr3R 15711323..15711883 181..741 99 <- Minus
chr3R 15711947..15712125 1..180 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:38:01 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 1..1122 173..1294 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:51:20 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 1..1122 173..1294 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:06:03 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 1..1122 173..1294 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:17:34 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 1..1122 173..1294 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:44 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 1..1122 173..1294 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:14:59 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 5..1548 1..1544 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:51:20 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 5..1548 1..1544 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:06:03 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 5..1548 1..1544 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:17:34 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 5..1548 1..1544 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:44 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
ninaE-RA 5..1548 1..1544 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:50 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19888023..19888201 1..180 99   Minus
3R 19886295..19886671 1168..1544 100 <- Minus
3R 19886740..19887017 890..1167 100 <- Minus
3R 19887076..19887223 742..889 100 <- Minus
3R 19887399..19887959 181..741 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:50 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19888023..19888201 1..180 99   Minus
3R 19886295..19886671 1168..1544 100 <- Minus
3R 19886740..19887017 890..1167 100 <- Minus
3R 19887076..19887223 742..889 100 <- Minus
3R 19887399..19887959 181..741 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:19:50 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19888023..19888201 1..180 99   Minus
3R 19886295..19886671 1168..1544 100 <- Minus
3R 19886740..19887017 890..1167 100 <- Minus
3R 19887076..19887223 742..889 100 <- Minus
3R 19887399..19887959 181..741 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:06:03 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15712017..15712393 1168..1544 100 <- Minus
arm_3R 15712462..15712739 890..1167 100 <- Minus
arm_3R 15712798..15712945 742..889 100 <- Minus
arm_3R 15713121..15713681 181..741 100 <- Minus
arm_3R 15713745..15713923 1..180 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:51:39 Download gff for RH01460.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19628854..19629032 1..180 99   Minus
3R 19627126..19627502 1168..1544 100 <- Minus
3R 19627571..19627848 890..1167 100 <- Minus
3R 19627907..19628054 742..889 100 <- Minus
3R 19628230..19628790 181..741 100 <- Minus

RH01460.pep Sequence

Translation from 172 to 1293

> RH01460.pep
MESFAVAAAQLGPHFAPLSNGSVVDKVTPDMAHLISPYWNQFPAMDPIWA
KILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIM
ITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQ
VIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSC
GIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMRE
QAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGL
FKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFG
KVDDGKSSDAQSQATASEAESKA*

RH01460.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17352-PA 373 GF17352-PA 1..373 1..373 1972 99.2 Plus
Dana\GF23219-PA 381 GF23219-PA 14..381 9..373 1352 69.6 Plus
Dana\GF18302-PA 369 GF18302-PA 16..369 19..373 1008 53.4 Plus
Dana\GF10499-PA 380 GF10499-PA 31..365 26..359 574 40.1 Plus
Dana\GF17335-PA 385 GF17335-PA 36..356 26..345 571 39.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\ninaE-PA 373 GG15786-PA 1..373 1..373 1983 100 Plus
Dere\Rh2-PA 381 GG23078-PA 17..381 12..373 1353 70.1 Plus
Dere\GG16931-PA 369 GG16931-PA 7..369 13..373 1005 52.1 Plus
Dere\Rh3-PA 383 GG15608-PA 34..382 26..373 583 37.9 Plus
Dere\Rh4-PA 378 GG15846-PA 30..350 26..345 561 40.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23312-PA 373 GH23312-PA 1..373 1..373 1949 97.9 Plus
Dgri\GH14493-PA 383 GH14493-PA 8..383 2..373 1336 67 Plus
Dgri\GH19080-PA 369 GH19080-PA 7..369 13..373 987 50.7 Plus
Dgri\GH23919-PA 382 GH23919-PA 33..353 26..345 575 39.9 Plus
Dgri\GH17066-PA 383 GH17066-PA 35..355 26..345 564 40.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
ninaE-PA 373 CG4550-PA 1..373 1..373 1999 100 Plus
Rh2-PA 381 CG16740-PA 14..381 9..373 1370 69.6 Plus
Rh6-PC 362 CG5192-PC 7..362 13..373 982 51.2 Plus
Rh4-PA 378 CG9668-PA 31..377 27..373 586 39.7 Plus
Rh3-PA 383 CG10888-PA 35..382 27..373 581 37.7 Plus
Rh5-PB 382 CG5279-PB 35..348 33..345 510 39.3 Plus
Rh5-PA 382 CG5279-PA 35..348 33..345 510 39.3 Plus
Rh7-PA 483 CG5638-PA 101..396 35..341 478 35.8 Plus
Octalpha2R-PC 670 CG18208-PC 121..329 52..268 249 29.7 Plus
Octalpha2R-PA 699 CG18208-PA 121..329 52..268 249 29.7 Plus
Octalpha2R-PB 740 CG18208-PB 121..329 52..268 249 29.7 Plus
AstA-R1-PD 394 CG2872-PD 68..364 44..346 221 23 Plus
AstA-R1-PB 394 CG2872-PB 68..364 44..346 221 23 Plus
Dop1R2-PA 537 CG18741-PA 111..314 53..259 218 28.2 Plus
Dop1R2-PB 539 CG18741-PB 111..314 53..259 218 28.2 Plus
Dop1R2-PC 807 CG18741-PC 111..314 53..259 218 28.2 Plus
Dop1R1-PC 481 CG9652-PC 106..428 39..341 210 24.3 Plus
Dop1R1-PB 496 CG9652-PB 130..443 52..341 207 24.1 Plus
Dop1R1-PD 511 CG9652-PD 145..458 52..341 207 24.1 Plus
Dop1R1-PF 535 CG9652-PF 130..443 52..341 207 24.1 Plus
Dop1R1-PE 560 CG9652-PE 130..443 52..341 207 24.1 Plus
Octbeta3R-PJ 445 CG42244-PJ 156..429 67..346 206 25.1 Plus
TkR99D-PB 517 CG7887-PB 92..404 42..352 202 23.1 Plus
TkR99D-PA 519 CG7887-PA 92..404 42..352 202 23.1 Plus
TkR99D-PC 564 CG7887-PC 92..404 42..352 202 23.1 Plus
NPFR-PA 485 CG1147-PA 80..411 44..366 201 24 Plus
NPFR-PD 489 CG1147-PD 80..411 44..366 201 24 Plus
Oct-TyrR-PB 601 CG7485-PB 105..318 47..264 196 27.1 Plus
Oct-TyrR-PA 601 CG7485-PA 105..318 47..264 196 27.1 Plus
5-HT1B-PD 562 CG15113-PD 66..291 20..257 195 25.8 Plus
5-HT1B-PA 617 CG15113-PA 66..291 20..257 195 25.8 Plus
5-HT1B-PE 629 CG15113-PE 66..291 20..257 195 25.8 Plus
TyrR-PC 631 CG7431-PC 118..311 52..250 193 28.9 Plus
TyrR-PB 631 CG7431-PB 118..311 52..250 193 28.9 Plus
TyrR-PA 631 CG7431-PA 118..311 52..250 193 28.9 Plus
5-HT1A-PB 834 CG16720-PB 231..449 52..279 193 25.5 Plus
AkhR-PD 443 CG11325-PD 42..328 53..338 192 25.2 Plus
AkhR-PB 443 CG11325-PB 42..328 53..338 192 25.2 Plus
AkhR-PA 443 CG11325-PA 42..328 53..338 192 25.2 Plus
AkhR-PC 455 CG11325-PC 42..328 53..338 192 25.2 Plus
TyrRII-PD 586 CG16766-PD 72..255 49..234 191 28.9 Plus
TyrRII-PC 586 CG16766-PC 72..255 49..234 191 28.9 Plus
TyrRII-PB 586 CG16766-PB 72..255 49..234 191 28.9 Plus
TyrRII-PA 586 CG16766-PA 72..255 49..234 191 28.9 Plus
AstA-R2-PC 357 CG10001-PC 47..330 59..346 190 22.6 Plus
AstA-R2-PA 357 CG10001-PA 47..330 59..346 190 22.6 Plus
NPFR-PC 462 CG1147-PC 80..381 44..337 190 24.1 Plus
NPFR-PB 466 CG1147-PB 80..381 44..337 190 24.1 Plus
mAChR-A-PA 788 CG4356-PA 113..321 59..265 189 26.5 Plus
mAChR-A-PB 805 CG4356-PB 113..321 59..265 189 26.5 Plus
AstA-R2-PB 350 CG10001-PB 47..323 59..339 186 22.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10328-PA 373 GI10328-PA 1..373 1..373 1958 98.4 Plus
Dmoj\GI22968-PA 384 GI22968-PA 19..384 11..373 1343 69.7 Plus
Dmoj\GI23224-PA 369 GI23224-PA 6..369 12..373 999 51.6 Plus
Dmoj\GI10051-PA 380 GI10051-PA 31..351 26..345 591 40.9 Plus
Dmoj\GI11660-PA 384 GI11660-PA 36..356 26..345 565 40.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\ninaE-PA 373 GL12414-PA 1..373 1..373 1936 97.1 Plus
Dper\GL23439-PA 381 GL23439-PA 11..381 6..373 1321 67.7 Plus
Dper\GL23758-PA 369 GL23758-PA 7..369 13..373 996 51.8 Plus
Dper\GL12515-PA 382 GL12515-PA 33..353 26..345 581 40.6 Plus
Dper\GL20699-PA 380 GL20699-PA 31..351 26..345 560 40.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\ninaE-PA 373 GA18249-PA 1..373 1..373 1936 97.1 Plus
Dpse\Rh2-PA 381 GA14120-PA 11..381 6..373 1320 67.7 Plus
Dpse\GA26731-PA 369 GA26731-PA 7..369 13..373 995 51.8 Plus
Dpse\Rh3-PA 398 GA10619-PA 49..369 26..345 580 40.6 Plus
Dpse\Rh4-PA 380 GA28288-PA 31..351 26..345 560 40.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26888-PA 373 GM26888-PA 1..373 1..373 1980 99.7 Plus
Dsec\GM17893-PA 381 GM17893-PA 14..381 9..373 1350 69.6 Plus
Dsec\GM24238-PA 369 GM24238-PA 7..369 13..373 1005 52.1 Plus
Dsec\GM24240-PA 369 GM24240-PA 7..369 13..373 1005 52.1 Plus
Dsec\GM19275-PA 236 GM19275-PA 3..218 105..319 655 56.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20095-PA 373 GD20095-PA 1..373 1..373 1979 99.7 Plus
Dsim\GD19254-PA 381 GD19254-PA 17..381 12..373 1348 69.9 Plus
Dsim\GD19028-PA 369 GD19028-PA 7..369 13..373 1005 52.1 Plus
Dsim\GD12438-PA 378 GD12438-PA 30..350 26..345 561 40.9 Plus
Dsim\GD23807-PA 382 GD23807-PA 32..348 30..345 508 38.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\ninaE-PA 373 GJ10183-PA 1..373 1..373 1947 97.9 Plus
Dvir\Rh2-PA 379 GJ14545-PA 3..379 2..373 1367 68.7 Plus
Dvir\GJ22883-PA 369 GJ22883-PA 7..369 13..373 996 51.5 Plus
Dvir\GJ23786-PA 380 GJ23786-PA 31..351 26..345 590 40.6 Plus
Dvir\Rh3-PA 381 GJ23441-PA 31..351 26..345 590 40.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\ninaE-PA 373 GK22808-PA 1..373 1..373 1959 98.4 Plus
Dwil\Rh2-PA 375 GK22745-PA 8..375 9..373 1334 69 Plus
Dwil\GK11464-PA 369 GK11464-PA 11..369 14..373 1016 52.9 Plus
Dwil\Rh3-PA 388 GK22792-PA 39..359 26..345 576 39.9 Plus
Dwil\Rh4-PA 380 GK13877-PA 1..352 1..345 555 38.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25107-PA 373 GE25107-PA 1..373 1..373 1979 99.7 Plus
Dyak\GE25563-PA 381 GE25563-PA 17..381 12..373 1353 70.1 Plus
Dyak\GE24316-PA 369 GE24316-PA 7..369 13..373 1006 52.1 Plus
Dyak\GE25087-PA 383 GE25087-PA 34..382 26..373 580 37.6 Plus
Dyak\GE22185-PA 378 GE22185-PA 30..350 26..345 558 40.6 Plus

RH01460.hyp Sequence

Translation from 172 to 1293

> RH01460.hyp
MESFAVAAAQLGPHFAPLSNGSVVDKVTPDMAHLISPYWNQFPAMDPIWA
KILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIM
ITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQ
VIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSC
GIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMRE
QAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGL
FKFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFG
KVDDGKSSDAQSQATASEAESKA*

RH01460.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
ninaE-PA 373 CG4550-PA 1..373 1..373 1999 100 Plus
Rh2-PA 381 CG16740-PA 14..381 9..373 1370 69.6 Plus
Rh6-PB 369 CG5192-PB 7..369 13..373 1025 52.1 Plus
Rh4-PA 378 CG9668-PA 31..377 27..373 586 39.7 Plus
Rh3-PA 383 CG10888-PA 35..382 27..373 581 37.7 Plus