BDGP Sequence Production Resources |
Search the DGRC for RH01747
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 17 |
Well: | 47 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG2837-RA |
Protein status: | RH01747.pep: gold |
Sequenced Size: | 1028 |
Gene | Date | Evidence |
---|---|---|
CG2837 | 2001-12-13 | Blastp of sequenced clone |
CG2837 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2837 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2837 | 2008-04-29 | Release 5.5 accounting |
CG2837 | 2008-08-15 | Release 5.9 accounting |
CG2837 | 2008-12-18 | 5.12 accounting |
1028 bp (1028 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070636
> RH01747.complete GTCAGTTGCCTTGCAGACGCGCAGCGGACAAGTTGTTACTGGAGATACGT TTCTGCGGCTCCACATAAATGCTGACTGCTGCTGCTGGCCATGATGTCTT GGCCAAAACAATGGGGCTTCGCTAGCCTCTGGCTGCCCGTGCTGATCGGC CTGCTCCACACACAAAATGCATCAGCTTTTATTGTGCCCCGGGAACTGCC CTCCATCTTATCCATAGTTTACTCCAATATACCACCGATTAAAAAGGGAA CTGATTCCCGTTTGGGCTTTGGCTTTCGCCTGGGCGAGCATGCGGACTTT CAGGTGATGGTGGAACTGGGTCCCCAGAAGGAGACGCGTCCCATCGGCGA GCCCAACCAGGATGATCAATCGTTCAACAAGCGCCAGGTGAGCCAGAGCG ATCAGAAGGCTCTGGCCCGTCAACTTTATCGCCAGCAGGTGATGGAGGAG GCGGAGAGATTGATGACGTCCACGGAGAGGAATGGGGCCAGCTGGCTGCA GGCCTGGTCGAATGGCATGAAACCGCAGAAGCCCAAATCAAAGGATCAGG CCAAGAAACCAGTGAAAGAAAGTTCTTCAAGCAATTATCAGAATGCACAG GCAACAGATCCCACCAGTGCCATGAAGCAGCTGCAGTTGCTCTACAAAAT GGCCACCAGTTCGAGCACCACAACCACCACAACAGTGCCTCCTGTCTTTA CAGGAGGATCCCTTAATTTGGGTGGTCCAAGTGGCTTTAAGCTGCCACCT CCTGCTCTTAGCCAGGATACCAATACGCTGAGCAATCCTGATCCTCTCAA GAGCAAATCTGAGATCACCAAGGAGCTTATGGATGTCAGTCTGGAGACGG ACACTTAGGTTGTGCGCTTATCTAGTTACTAATTAACCTCTATATACAAA TACTTGTGTATTTGGGTGCTTAGCAAATCTGTGTGTAGTATGGCTTAGCT ATCTTTTGTAAATAATATTATAAATAAAACTTAATTTAGTGAATCGCTTT ATTGAACAGCCCGAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2837-RB | 1294 | CG2837-RB | 176..1189 | 2..1015 | 5055 | 99.9 | Plus |
CG2837-RC | 1309 | CG2837-RC | 239..1204 | 50..1015 | 4815 | 99.8 | Plus |
CG2837-RA | 1344 | CG2837-RA | 274..1239 | 50..1015 | 4815 | 99.8 | Plus |
CG2837-RC | 1309 | CG2837-RC | 176..223 | 2..49 | 240 | 100 | Plus |
CG2837-RA | 1344 | CG2837-RA | 176..223 | 2..49 | 240 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 4903200..4903964 | 1011..247 | 3795 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 4904883..4904994 | 160..49 | 560 | 100 | Minus |
chr2L | 23010047 | chr2L | 4904022..4904109 | 248..161 | 440 | 100 | Minus |
chr2L | 23010047 | chr2L | 4905844..4905891 | 49..2 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4904066..4904834 | 1015..247 | 3830 | 99.9 | Minus |
2L | 23513712 | 2L | 4905753..4905864 | 160..49 | 560 | 100 | Minus |
2L | 23513712 | 2L | 4904892..4904979 | 248..161 | 440 | 100 | Minus |
2L | 23513712 | 2L | 4906714..4906761 | 49..2 | 240 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 4904066..4904834 | 1015..247 | 3830 | 99.8 | Minus |
2L | 23513712 | 2L | 4905753..4905864 | 160..49 | 560 | 100 | Minus |
2L | 23513712 | 2L | 4904892..4904979 | 248..161 | 440 | 100 | Minus |
2L | 23513712 | 2L | 4906714..4906761 | 49..2 | 240 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 4903198..4903963 | 248..1013 | 95 | <- | Minus |
chr2L | 4904023..4904109 | 161..247 | 100 | <- | Minus |
chr2L | 4904883..4904993 | 50..160 | 100 | <- | Minus |
chr2L | 4905844..4905891 | 1..49 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RC | 1..768 | 91..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RC | 1..768 | 91..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 1..768 | 91..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RC | 1..768 | 91..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 1..768 | 91..858 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 1..1012 | 2..1013 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 1..1012 | 2..1013 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 2..1011 | 2..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 1..1012 | 2..1013 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2837-RB | 2..1011 | 2..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4904068..4904833 | 248..1013 | 99 | <- | Minus |
2L | 4904893..4904979 | 161..247 | 100 | <- | Minus |
2L | 4905753..4905863 | 50..160 | 100 | <- | Minus |
2L | 4906714..4906761 | 1..49 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4904068..4904833 | 248..1013 | 99 | <- | Minus |
2L | 4904893..4904979 | 161..247 | 100 | <- | Minus |
2L | 4905753..4905863 | 50..160 | 100 | <- | Minus |
2L | 4906714..4906761 | 1..49 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4904068..4904833 | 248..1013 | 99 | <- | Minus |
2L | 4904893..4904979 | 161..247 | 100 | <- | Minus |
2L | 4905753..4905863 | 50..160 | 100 | <- | Minus |
2L | 4906714..4906761 | 1..49 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 4905753..4905863 | 50..160 | 100 | <- | Minus |
arm_2L | 4906714..4906761 | 1..49 | 97 | Minus | |
arm_2L | 4904068..4904833 | 248..1013 | 99 | <- | Minus |
arm_2L | 4904893..4904979 | 161..247 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 4904068..4904833 | 248..1013 | 99 | <- | Minus |
2L | 4904893..4904979 | 161..247 | 100 | <- | Minus |
2L | 4905753..4905863 | 50..160 | 100 | <- | Minus |
2L | 4906714..4906761 | 1..49 | 97 | Minus |
Translation from 90 to 857
> RH01747.hyp MMSWPKQWGFASLWLPVLIGLLHTQNASAFIVPRELPSILSIVYSNIPPI KKGTDSRLGFGFRLGEHADFQVMVELGPQKETRPIGEPNQDDQSFNKRQV SQSDQKALARQLYRQQVMEEAERLMTSTERNGASWLQAWSNGMKPQKPKS KDQAKKPVKESSSSNYQNAQATDPTSAMKQLQLLYKMATSSSTTTTTTVP PVFTGGSLNLGGPSGFKLPPPALSQDTNTLSNPDPLKSKSEITKELMDVS LETDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2837-PD | 255 | CG2837-PD | 1..255 | 1..255 | 1318 | 100 | Plus |
CG2837-PC | 255 | CG2837-PC | 1..255 | 1..255 | 1318 | 100 | Plus |
CG2837-PB | 255 | CG2837-PB | 1..255 | 1..255 | 1318 | 100 | Plus |
CG2837-PA | 255 | CG2837-PA | 1..255 | 1..255 | 1318 | 100 | Plus |
Translation from 90 to 857
> RH01747.pep MMSWPKQWGFASLWLPVLIGLLHTQNASAFIVPRELPSILSIVYSNIPPI KKGTDSRLGFGFRLGEHADFQVMVELGPQKETRPIGEPNQDDQSFNKRQV SQSDQKALARQLYRQQVMEEAERLMTSTERNGASWLQAWSNGMKPQKPKS KDQAKKPVKESSSSNYQNAQATDPTSAMKQLQLLYKMATSSSTTTTTTVP PVFTGGSLNLGGPSGFKLPPPALSQDTNTLSNPDPLKSKSEITKELMDVS LETDT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21548-PA | 240 | GF21548-PA | 1..240 | 2..255 | 910 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24344-PA | 255 | GG24344-PA | 1..255 | 1..255 | 1200 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10105-PA | 243 | GH10105-PA | 27..242 | 25..252 | 521 | 57.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
snsl-PD | 255 | CG2837-PD | 1..255 | 1..255 | 1318 | 100 | Plus |
snsl-PC | 255 | CG2837-PC | 1..255 | 1..255 | 1318 | 100 | Plus |
snsl-PB | 255 | CG2837-PB | 1..255 | 1..255 | 1318 | 100 | Plus |
snsl-PA | 255 | CG2837-PA | 1..255 | 1..255 | 1318 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14421-PA | 244 | GI14421-PA | 1..243 | 2..252 | 638 | 54.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19494-PA | 255 | GL19494-PA | 1..252 | 2..253 | 854 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15478-PA | 255 | GA15478-PA | 1..252 | 2..253 | 860 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18064-PA | 255 | GM18064-PA | 1..255 | 1..255 | 1304 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22682-PA | 255 | GD22682-PA | 1..255 | 1..255 | 1310 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16263-PA | 236 | GJ16263-PA | 1..235 | 2..252 | 629 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24591-PA | 252 | GK24591-PA | 25..252 | 23..255 | 658 | 63.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18722-PA | 254 | GE18722-PA | 1..254 | 2..255 | 1137 | 92.9 | Plus |