BDGP Sequence Production Resources |
Search the DGRC for RH02303
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 23 |
Well: | 3 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9837-RE |
Protein status: | RH02303.pep: gold |
Preliminary Size: | 631 |
Sequenced Size: | 819 |
Gene | Date | Evidence |
---|---|---|
CG9837 | 2001-12-13 | Blastp of sequenced clone |
CG9837 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9837 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9837 | 2008-04-29 | Release 5.5 accounting |
CG9837 | 2008-08-15 | Release 5.9 accounting |
CG9837 | 2008-12-18 | 5.12 accounting |
819 bp (819 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070638
> RH02303.complete GAGTCAAACATTTCCCAGTTCACCGACAAGATGTGGTCCTCTAAGACTAT TTTGGTTTTCCTAGCAGCATTTACTTTGGTCCAGGGTAGCATGCGGTTTC ACTTCACCTTGGACTTTCACGTACAGCAGCCGCCGAATGCATCCGACACC ATCGACAAGACCATTATTGTGGAGAACGATCGGATATCTATGGTGGACAA CGAAGGAGCGACTACTAAGGCTCCGATGACCCAGTGGACAGATCAGGATC AGTATAATCAGGACGCATTGCTGAAGGTGACCGATACGCGCAGATCGGTG CAACAGCTGAATACGGAGCTCTCACCCCTGGTTGGCAGGAGCACCGATTT GGCCAGAAGGATTAAGCAGAGTATGCGATACGTCAACGAGGTGGATGCTA ATCTGGACGATTTGAGCAACTTTGGGCAGCTGGTGGAGCTGCTCAAGAAA TTCGTAATCCTAGTCGATAACCTAAGGGATCCAAACAATCTCGGAGGCAT TCGAAGCCTGGAGTACGTACTCCTGAAGTTGGCTCTAGAGAAGTACGACC TTCTGAACAAGCGACAGGAGATCGGTGAATACTTGGAAAGGGCGGAGAGT GCCTGGCGAAGATACCAAAACACACAGGTGGTTGTTCTGGATAACTCCAC CTGAGTCGGGCTCAGATGCCTAGGACCACCACATTAGGAACTTAGTTTTA GGATAAAACAGAACAAAGACCAGCATCATGGGTCGACACAATCGCTGCAC CATGATCTACTAGAGCGGCTCGGCTCTTGAAAGGAATAAAAGACATCGAA GGGAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4634898..4635611 | 90..803 | 100 | <- | Minus |
chr3R | 4635674..4635760 | 1..89 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RA | 1..624 | 31..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RC | 55..708 | 1..654 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RE | 1..624 | 31..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RA | 1..624 | 31..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RE | 1..624 | 31..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RA | 1..802 | 2..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RC | 55..857 | 1..803 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RE | 1..802 | 2..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RA | 1..802 | 2..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9837-RE | 1..802 | 2..803 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8808949..8809662 | 90..803 | 100 | <- | Minus |
3R | 8809725..8809811 | 1..89 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8808949..8809662 | 90..803 | 100 | <- | Minus |
3R | 8809725..8809811 | 1..89 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8808949..8809662 | 90..803 | 100 | <- | Minus |
3R | 8809725..8809811 | 1..89 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4634671..4635384 | 90..803 | 100 | <- | Minus |
arm_3R | 4635447..4635533 | 1..89 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8549780..8550493 | 90..803 | 100 | <- | Minus |
3R | 8550556..8550642 | 1..89 | 95 | Minus |
Translation from 30 to 653
> RH02303.pep MWSSKTILVFLAAFTLVQGSMRFHFTLDFHVQQPPNASDTIDKTIIVEND RISMVDNEGATTKAPMTQWTDQDQYNQDALLKVTDTRRSVQQLNTELSPL VGRSTDLARRIKQSMRYVNEVDANLDDLSNFGQLVELLKKFVILVDNLRD PNNLGGIRSLEYVLLKLALEKYDLLNKRQEIGEYLERAESAWRRYQNTQV VVLDNST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16828-PA | 211 | GF16828-PA | 9..211 | 4..207 | 699 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17416-PA | 235 | GG17416-PA | 29..235 | 1..207 | 994 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19332-PA | 206 | GH19332-PA | 16..206 | 11..206 | 573 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9837-PF | 207 | CG9837-PF | 1..207 | 1..207 | 1049 | 100 | Plus |
CG9837-PE | 207 | CG9837-PE | 1..207 | 1..207 | 1049 | 100 | Plus |
CG9837-PD | 187 | CG9837-PD | 1..187 | 21..207 | 951 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23942-PA | 193 | GI23942-PA | 18..193 | 23..205 | 486 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12121-PA | 206 | GL12121-PA | 2..203 | 4..206 | 719 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22066-PA | 212 | GA22066-PA | 9..209 | 4..206 | 723 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26302-PA | 207 | GM26302-PA | 1..207 | 1..207 | 1044 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20837-PA | 207 | GD20837-PA | 1..207 | 1..207 | 1050 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23731-PA | 204 | GJ23731-PA | 11..201 | 7..202 | 557 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11820-PA | 212 | GK11820-PA | 14..212 | 11..205 | 551 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24816-PA | 207 | GE24816-PA | 1..207 | 1..207 | 1002 | 92.3 | Plus |
Translation from 90 to 653
> RH02303.hyp MRFHFTLDFHVQQPPNASDTIDKTIIVENDRISMVDNEGATTKAPMTQWT DQDQYNQDALLKVTDTRRSVQQLNTELSPLVGRSTDLARRIKQSMRYVNE VDANLDDLSNFGQLVELLKKFVILVDNLRDPNNLGGIRSLEYVLLKLALE KYDLLNKRQEIGEYLERAESAWRRYQNTQVVVLDNST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9837-PD | 187 | CG9837-PD | 1..187 | 1..187 | 951 | 100 | Plus |
CG9837-PF | 207 | CG9837-PF | 21..207 | 1..187 | 951 | 100 | Plus |
CG9837-PE | 207 | CG9837-PE | 21..207 | 1..187 | 951 | 100 | Plus |