BDGP Sequence Production Resources |
Search the DGRC for RH02365
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 23 |
Well: | 65 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Ccz1-RB |
Protein status: | RH02365.pep: gold |
Preliminary Size: | 1392 |
Sequenced Size: | 1547 |
Gene | Date | Evidence |
---|---|---|
CG14980 | 2001-12-17 | Blastp of sequenced clone |
CG14980 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14980 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14980 | 2008-04-29 | Release 5.5 accounting |
CG14980 | 2008-08-15 | Release 5.9 accounting |
CG14980 | 2008-12-18 | 5.12 accounting |
1547 bp (1547 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071668
> RH02365.complete GACCTTTTCATTATTTACCTTTGGCCAAAATAAATACTTTTAATTCTGTG CGGAAAGAAATGGCTAAATTATTGCAACGCGTAGAAATTACGTTACGCAG CTTTTACATTTTTAACTCGACTTTTGGCCAAGTTGAAGGCGAGGAACACA AGAAGGTTTTGTTTTACCATCCAAATGACATTGAATTAAATACGAAAATC AAAGATGTGGGACTAAGTGAGGCCATCATAAGGTTCACTGGAACTTTTAC ATCTGAAGATGATTGCCAGGCCTTGCATACCCAGAAAACCACACAACTCT TCTACCAACCCGAGCCAGGGTATTGGTTAGTACTGGTCCTGAATGTTCCC AAGGAGGTGCGCTTAAAGGAGGGCGTGGAGGTGGCCGATTATCGGGGTGC CGAGATCTCCGACAGGATTTATAGAGCAATACTTAGACAATGCTATCAAA TGTTTCGCTTTCAAAACGGATGTTTCTCCTCCTGCGGAAGTGAAGAACCT AATCCGGATAAGCGTAGGGAACTGCTCTGCCAGAAGCTACTCCAGTTCTA TGATCAGCATCTGACCAACCTGAGGGATCCCGCGCAATGTGATATCATCG ATATGCTGCATTCCATTCAGTATCTGCCATTGGATAAAACGCTCTTCTTG CGGGCCCAAAACTTTGGCACCCTGTGCGAGACCTTCCCCGACATCAAGGA GAGCATAATGCTCTACCAGGAGCAGGTCCTTTGTGGCGGAAAACTTAGCC CGGAGGATCTGCACTGCGTGCACTCGTATGTCGTGCAACACGTGCTGAAA GTCGAGGCCAGCAGTTCCACCATTGCAGTTTCTCCTTCACTAAAGCGAAG CATAAGTGAATGCCAGGTGGGCGGATTCGTAAGAAGTCGTCAGAAGGTCG CAGGAGATGAACATGACGCTGTGAATGAGGAAGATCATCCAATGAAGGTC TATGTGACACTGGACAAGGAGGCCAAACCCTACTACTTGCTCATCTACCG CGCTTTGCACATAACTCTGTGTCTGTTTCTGAATGCTGACCAGGTTGCGC CGAAACAAGATCTCTACGACGATCTCCATGCCTACATGGCTCCCCAACTG ACTTCGTTGGCCCGGGACATATCCAGCGAGTTGACAAAGGAGGCGGTGGG TGCTGCAGGCCAGGACAACTCCAGCGGGAACAGCGAAACGGCGCCGAAGT ACTTGTTCATTAACGAACAAAGCCTGCAGCACCACACGAACTTTCAGAGG CACCTGCCCCAAGGGCTGCCCCGCAATGTGCTTAGTATCATTGCGGACTT GGCCAATGGCAGTGGCAAGGCGGAAATGGAGAGTGCTCCTGCCGAGGAAG TTCAGGTCAAGACCACCAATGACTATTGGATTGTGAAGCGGCGCTGTAAC TACAGGCAGTACTATGTGATCCTGTGCAATAGCAAGGCCACCTTGCTGGA CGTCACCCAGGAAGCGAGGCGCATTTTCGAGCAAGAGCTCACAGATGATG TATTTTTTGACAAATAAAGAGGAGGATTAGGTAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14980-RB | 1579 | CG14980-RB | 24..1557 | 2..1535 | 7670 | 100 | Plus |
CG14980.a | 1522 | CG14980.a | 231..1522 | 241..1532 | 6460 | 100 | Plus |
CG14980.a | 1522 | CG14980.a | 1..231 | 2..232 | 1155 | 100 | Plus |
CG14977-RA | 599 | CG14977-RA | 511..599 | 1535..1447 | 445 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 3897459..3898253 | 1035..241 | 3930 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 3896899..3897394 | 1532..1037 | 2405 | 99 | Minus |
chr3L | 24539361 | chr3L | 3898469..3898608 | 144..5 | 685 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 3898317..3898416 | 241..142 | 500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 3898004..3898798 | 1035..241 | 3975 | 100 | Minus |
3L | 28110227 | 3L | 3897441..3897941 | 1535..1035 | 2505 | 100 | Minus |
3L | 28110227 | 3L | 3899014..3899156 | 144..2 | 715 | 100 | Minus |
3L | 28110227 | 3L | 3898862..3898961 | 241..142 | 500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 3898004..3898798 | 1035..241 | 3975 | 100 | Minus |
3L | 28103327 | 3L | 3897441..3897941 | 1535..1035 | 2505 | 100 | Minus |
3L | 28103327 | 3L | 3899014..3899156 | 144..2 | 715 | 100 | Minus |
3L | 28103327 | 3L | 3898862..3898961 | 241..142 | 500 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3896899..3897395 | 1036..1532 | 98 | <- | Minus |
chr3L | 3897459..3898252 | 242..1035 | 99 | <- | Minus |
chr3L | 3898317..3898414 | 144..241 | 100 | <- | Minus |
chr3L | 3898470..3898611 | 1..143 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14980-RB | 1..1458 | 60..1517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14980-RB | 1..1458 | 60..1517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccz1-RB | 1..1458 | 60..1517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14980-RB | 1..1458 | 60..1517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccz1-RB | 1..1458 | 60..1517 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14980-RB | 1..1531 | 2..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14980-RB | 1..1531 | 2..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccz1-RB | 1..1531 | 2..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14980-RB | 1..1531 | 2..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ccz1-RB | 1..1531 | 2..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3898004..3898797 | 242..1035 | 100 | <- | Minus |
3L | 3898862..3898959 | 144..241 | 100 | <- | Minus |
3L | 3899015..3899156 | 1..143 | 99 | Minus | |
3L | 3897444..3897940 | 1036..1532 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3898004..3898797 | 242..1035 | 100 | <- | Minus |
3L | 3898862..3898959 | 144..241 | 100 | <- | Minus |
3L | 3899015..3899156 | 1..143 | 99 | Minus | |
3L | 3897444..3897940 | 1036..1532 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3898004..3898797 | 242..1035 | 100 | <- | Minus |
3L | 3898862..3898959 | 144..241 | 100 | <- | Minus |
3L | 3899015..3899156 | 1..143 | 99 | Minus | |
3L | 3897444..3897940 | 1036..1532 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3897444..3897940 | 1036..1532 | 100 | <- | Minus |
arm_3L | 3898004..3898797 | 242..1035 | 100 | <- | Minus |
arm_3L | 3898862..3898959 | 144..241 | 100 | <- | Minus |
arm_3L | 3899015..3899156 | 1..143 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3897444..3897940 | 1036..1532 | 100 | <- | Minus |
3L | 3898004..3898797 | 242..1035 | 100 | <- | Minus |
3L | 3898862..3898959 | 144..241 | 100 | <- | Minus |
3L | 3899015..3899156 | 1..143 | 99 | Minus |
Translation from 2 to 1516
> RH02365.hyp PFHYLPLAKINTFNSVRKEMAKLLQRVEITLRSFYIFNSTFGQVEGEEHK KVLFYHPNDIELNTKIKDVGLSEAIIRFTGTFTSEDDCQALHTQKTTQLF YQPEPGYWLVLVLNVPKEVRLKEGVEVADYRGAEISDRIYRAILRQCYQM FRFQNGCFSSCGSEEPNPDKRRELLCQKLLQFYDQHLTNLRDPAQCDIID MLHSIQYLPLDKTLFLRAQNFGTLCETFPDIKESIMLYQEQVLCGGKLSP EDLHCVHSYVVQHVLKVEASSSTIAVSPSLKRSISECQVGGFVRSRQKVA GDEHDAVNEEDHPMKVYVTLDKEAKPYYLLIYRALHITLCLFLNADQVAP KQDLYDDLHAYMAPQLTSLARDISSELTKEAVGAAGQDNSSGNSETAPKY LFINEQSLQHHTNFQRHLPQGLPRNVLSIIADLANGSGKAEMESAPAEEV QVKTTNDYWIVKRRCNYRQYYVILCNSKATLLDVTQEARRIFEQELTDDV FFDK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ccz1-PB | 485 | CG14980-PB | 1..485 | 20..504 | 2536 | 100 | Plus |
Translation from 59 to 1516
> RH02365.pep MAKLLQRVEITLRSFYIFNSTFGQVEGEEHKKVLFYHPNDIELNTKIKDV GLSEAIIRFTGTFTSEDDCQALHTQKTTQLFYQPEPGYWLVLVLNVPKEV RLKEGVEVADYRGAEISDRIYRAILRQCYQMFRFQNGCFSSCGSEEPNPD KRRELLCQKLLQFYDQHLTNLRDPAQCDIIDMLHSIQYLPLDKTLFLRAQ NFGTLCETFPDIKESIMLYQEQVLCGGKLSPEDLHCVHSYVVQHVLKVEA SSSTIAVSPSLKRSISECQVGGFVRSRQKVAGDEHDAVNEEDHPMKVYVT LDKEAKPYYLLIYRALHITLCLFLNADQVAPKQDLYDDLHAYMAPQLTSL ARDISSELTKEAVGAAGQDNSSGNSETAPKYLFINEQSLQHHTNFQRHLP QGLPRNVLSIIADLANGSGKAEMESAPAEEVQVKTTNDYWIVKRRCNYRQ YYVILCNSKATLLDVTQEARRIFEQELTDDVFFDK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10255-PA | 480 | GF10255-PA | 1..480 | 1..485 | 1931 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14242-PA | 485 | GG14242-PA | 1..485 | 1..485 | 2399 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15715-PA | 461 | GH15715-PA | 1..461 | 1..485 | 1443 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ccz1-PB | 485 | CG14980-PB | 1..485 | 1..485 | 2536 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14273-PA | 453 | GI14273-PA | 1..453 | 1..485 | 1514 | 61.2 | Plus |
Dmoj\GI12771-PA | 453 | GI12771-PA | 1..453 | 1..485 | 1508 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16205-PA | 482 | GL16205-PA | 1..482 | 1..485 | 1850 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13401-PA | 482 | GA13401-PA | 1..482 | 1..485 | 1851 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14033-PA | 485 | GM14033-PA | 1..485 | 1..485 | 2525 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17601-PA | 485 | GD17601-PA | 1..485 | 1..485 | 2541 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16069-PA | 460 | GJ16069-PA | 1..460 | 1..485 | 1575 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20492-PA | 477 | GK20492-PA | 1..477 | 1..485 | 1577 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20669-PA | 485 | GE20669-PA | 1..485 | 1..485 | 2447 | 93 | Plus |