BDGP Sequence Production Resources |
Search the DGRC for RH02374
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 23 |
Well: | 74 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17778-RA |
Protein status: | RH02374.pep: gold |
Sequenced Size: | 1134 |
Gene | Date | Evidence |
---|---|---|
CG17778 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17778 | 2002-04-26 | Blastp of sequenced clone |
CG17778 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17778 | 2008-04-29 | Release 5.5 accounting |
CG17778 | 2008-08-15 | Release 5.9 accounting |
CG17778 | 2008-12-18 | 5.12 accounting |
1134 bp (1134 high quality bases) assembled on 2002-04-26
GenBank Submission: AY113555
> RH02374.complete GACTCTGCTCGGAGAGCTTGGACTGGACTGTCAGCGCTCCGGACGACGCG CCTTAAGTTAGGCAAAAACAATTTTGTTATTTGCCGCAGTATGGACTTGC TGCGCTGACTTACTACTTACTGTCATGCCAAGAGGCTGAGGTCGAGAGGC AGCTTGGGATCTGGAAAAGATGGAGGCCACGCCGGGCTACCAGGACATCA GCGCTCTGGAAAAATCGGTGGCCAATGCAGGATCGCAGCTGTACACGATG GCCCACAAACTGCACGCGGTGGAGCGCAGCCTCGAACAGACGACGATGGA GCAGATGGACGAGATGGAGGTCCTCGAGTTGCTCGAGTCGATGAGCGAGG TGACCAACGAGTACCAGAATCTGCGCAAGGACATTCGCGAGGTGCAGCAG TTGCAGCGTGACGTCAGCAGCTCCATACGGTACCAAATGCGCAGCATGCA GCAGACTTTTCACACTCTAAAACAGCGGATAGCTAGCTCCCAGAAGGGTC GCAAAAAGCCCGAGAAAGGGCTCGATGGAGCAGGGGTTGGTATTCATGAA TAATCAATGACCCTATTGATTGGCCTCCCTGGCGAATAGGTGCGGTAAAT GTGTCAATGGGGACGCAAATGTAGGGACTAAATTGGCACCAATCTGAAGC AATCAACTGTGTAACTATATATCGCAAGCCCACTCCAAGCATTTAGACTC GGAAAAAAATCCTATACTTTATATACATGTATACACATTAAGAAAACCAC ACCCATTGTATGCGAATTAAGGTTTTTTTTTGGTGTTTTATTCCAGTGAT AGGCAGGAATAACGAAAACTCACTGCTCTAAGAACACAAAAACACAATGC TTAACACAGAGTAAACAACATTTACGATGATATGCGTTCTTTAGGACGAA CCGGAATGTCTGAATGCACTTTTCCAAATTTTGCCTTAACATAATAGTAT TTTGAGGTAGTTTTTGATACGACACGTTTTAAAAGATAATATATAACAGA CCGTACATATTTAGGCCACACACAATGGTTATTCTTGTGTTAGTTTCATT TTTGGAGATTTATTTGTTGAGCTCTAGAGAAAATAAAAGTTAGTTAAACC TCGGGAGACGAGGAACGCAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 388934..389150 | 1..217 | 99 | -> | Plus |
chrX | 389502..390402 | 218..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 1..384 | 170..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 1..384 | 170..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 1..384 | 170..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 1..384 | 170..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 1..384 | 170..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 2..1119 | 1..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 2..1119 | 1..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 2..1119 | 1..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 2..1119 | 1..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17778-RA | 2..1119 | 1..1118 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 494901..495117 | 1..217 | 99 | -> | Plus |
X | 495469..496369 | 218..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 494901..495117 | 1..217 | 99 | -> | Plus |
X | 495469..496369 | 218..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 494901..495117 | 1..217 | 99 | -> | Plus |
X | 495469..496369 | 218..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 388934..389150 | 1..217 | 99 | -> | Plus |
arm_X | 389502..390402 | 218..1118 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 502999..503215 | 1..217 | 99 | -> | Plus |
X | 503567..504467 | 218..1118 | 100 | Plus |
Translation from 169 to 552
> RH02374.hyp MEATPGYQDISALEKSVANAGSQLYTMAHKLHAVERSLEQTTMEQMDEME VLELLESMSEVTNEYQNLRKDIREVQQLQRDVSSSIRYQMRSMQQTFHTL KQRIASSQKGRKKPEKGLDGAGVGIHE*
Translation from 169 to 552
> RH02374.pep MEATPGYQDISALEKSVANAGSQLYTMAHKLHAVERSLEQTTMEQMDEME VLELLESMSEVTNEYQNLRKDIREVQQLQRDVSSSIRYQMRSMQQTFHTL KQRIASSQKGRKKPEKGLDGAGVGIHE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21937-PA | 125 | GF21937-PA | 3..105 | 4..106 | 520 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12790-PA | 127 | GG12790-PA | 1..127 | 1..127 | 651 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24778-PA | 122 | GH24778-PA | 5..112 | 6..113 | 460 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17778-PB | 127 | CG17778-PB | 1..127 | 1..127 | 632 | 100 | Plus |
CG17778-PA | 127 | CG17778-PA | 1..127 | 1..127 | 632 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15066-PA | 128 | GI15066-PA | 5..126 | 6..126 | 492 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20385-PA | 136 | GL20385-PA | 1..107 | 1..107 | 491 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14661-PA | 136 | GA14661-PA | 1..107 | 1..107 | 490 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19069-PA | 127 | GM19069-PA | 1..127 | 1..127 | 651 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14860-PA | 126 | GJ14860-PA | 4..106 | 5..107 | 466 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16507-PA | 122 | GK16507-PA | 3..114 | 6..117 | 489 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16616-PA | 131 | GE16616-PA | 1..131 | 1..127 | 629 | 94.7 | Plus |