BDGP Sequence Production Resources |
Search the DGRC for RH02475
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 24 |
Well: | 75 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9394-RA |
Protein status: | RH02475.pep: gold |
Sequenced Size: | 2329 |
Gene | Date | Evidence |
---|---|---|
CG9394 | 2001-12-13 | Blastp of sequenced clone |
CG9394 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9394 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9394 | 2008-04-29 | Release 5.5 accounting |
CG9394 | 2008-08-15 | Release 5.9 accounting |
CG9394 | 2008-12-18 | 5.12 accounting |
2329 bp (2329 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070640
> RH02475.complete GAGAACGGGTTTGACCGCCGGCCCGACGAGACGGATTTCCCTATCGCGCC GTGACTTCGATATCACGGAACCTTATCAACTCGGGTACTCGAAGATGTGG CCACTGCCATAAATCTCGTCACAGTGATTCCAGTGCCAGGAGAGGTGGTG GTCAGACGCCTTAGCACCAAAAAAAACCAGAACACAGTTCCAATTCGTGC GCCGTCGAGGGCAGACATGTCGGTGTCCTGGTCGAAGACTTTCGCGGCAT TCACCGTCGCCTGGCTCAGTGCCCTGTGCCTGCTGCCCGTGGAGACATTC TGTGACACCTCCTACTACGAGAAGTACTACGCGGCGCGGCGCTATGTGCC CCTCAAGCGAAATGCTCCGCTGGTCTTCAACTTTACCCTAACGCTGCCGG ATGCGGATCAACTGGCGTCCTTCGAGCGGCCCGCCCTGGTGGGCAATCTG CCAGTGCTGGGCGCCTGGCAAGCGGGACGCGCTGTGCTCCTCAACCGCAC TGCAATCCTGAATGTTTGGAGCGCCTCCGTGGAGATACCGCAAAACAGCA GCGTTGAGTATCGCTACTTTGCCGCCGCCGTTGGCCAGAGTGGAGCCGTG CAGATTCGCCGCTGGGAGTCGCATGTCCAGGCAAGGACCTTTAATACCAC CAAGTTCAGTGGCAATCGCAGCGATGAGTTCGGACTCATTGGCAATGAGC GCCAGTTGTCGCGTGGCTGGCTTCAGGACTCGGGCAACATTCTGCAGTTG AAGCTCTTCCGCGAGGCTCTGAGCTTGGAGGAGCAACCGGAGGTGGGGCA GGAGAAGCTGCGTCTGCGTTTGCAACCAGTAGATCCAAAGACTCTAGCGC CCATCCTAAGTTCGGCACGTGCCAATGTGGAGTACGTGCGAATGGCGTAC GGTGACAGTAAGCTGCGGGTGCAGCCGGAGTACGGAGTGCCCTACGCCAC CGGTGACATCCTCATGTTCCATGTGAACCTGGAACAGCTGGATCGAGTGG CCTATCTGGTGGAAGTTTATGCCGAACAACCGGATGAGGACCTGGTCCGT CTCCTAGGATACTCGCACCTGCTGCACACCTCGTTCTCCGGCACTGAAGG CGATGTGTCCATCGACCTTATTTCGCCGCTCTGGCAGCGCGTGGTGGGTC AACTGCGTATTGAGTACCTGCACATTCGGCCCATGGAGAAGGATGGCTTC GATCTGCGCACCAGCTTCGCCAACTACTGGCGCTCCAATTGGACAGCCCT GGAGATTGGCCATCGGGGATTGGGAAAATCTCTTACGGTCACCACGAATG CGGCTCCGCTTATCGAGAACACGGTGGCCACCATGCTGGCCTCCTCTGAA TTGGGCGCTGATCTCGTGGAGTTTGATGTGCAGCTGACCAGCGACCTGGT GCCCATCATCCACCATGATTTTTCCATTCGCGTCTGCATTGACTCGAAGA CCCCAACGAGCAAAGATGATTTGACCGAGGTGCTGCTAAAGGACATATCC TATGAGCAGCTCAAGGATCTGAAAACCTACCAGATCGTGGGCAACAAGAT TGTCGAGTATCCGGCGCACAACAACGTGGAACCGCCGGAGCAGCGACTTT TCCCCACACTGCAGGACTTCTTTGAGCGGGTGAACCTGTCCACCGGATTC GACATCGAGATCAAGTGGCCACAGCAGAGGGCCGATGGACTGTTTGAGAG CGAACAGACGCTGGACAAGAACCTGTTCGCGGATCGCATTCTGGCTGTGG TGCGACGACATGGCTGCGGTCGACTCAATGTGATCAAGAGCTTCGACGCG GACTTATGCTCCCTGCTGCGCTTCAAGCAGCACATGTACCCGGTGCTCTT CCTCTCCAGCAGCAAGGAGAACGTCTTCAACGATCCCCGCACCAGCACCG TGGAGCAGAGCGTCAACTTTGCCCAGGCCTTCGATCTGGGCGGCGTGTCA CCCAACGCCGTGTTCGTCAAGGCGGATCCGGGTTTGGTGCAACGGGCAAA GGCACAGGTGCCCATTGTCCTGCTCTGGGGCTCGGACCTCAAGGATCGGG AGTCCATCGACTGGTTCCTGCAGCAGGGACCCACTGGAGTCATCTACGAT CGACTCGACCTCTGGCTGGGCGCCAACAGGACGAGTGCGTTCGAGGCGGA GCAGGATCTGCCGGGCTACTTCCAGCTACAGTGCGATCCGGCGCCCAAGG AGCGCGAGGTGAACTCCACCATCGAAAGCATACTGAGTAATGTTAACTTC CTGTAGTGAATTCTGTAGAGCCACCAGAGATATATACATCATGCAATAAA ATAACTAAAAAGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9394-RA | 2316 | CG9394-RA | 2..2313 | 2..2314 | 11525 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17004839..17007149 | 2..2313 | 11120 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21118395..21120706 | 2..2314 | 11515 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21119594..21121905 | 2..2314 | 11525 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17004838..17007149 | 1..2313 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 1..2040 | 217..2256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 1..2040 | 217..2256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 1..2040 | 217..2256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 1..2040 | 217..2256 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 2..2312 | 2..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 2..2312 | 2..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 2..2312 | 2..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 2..2312 | 2..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9394-RA | 2..2312 | 2..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21118394..21120705 | 1..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21118394..21120705 | 1..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21118394..21120705 | 1..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17005899..17008210 | 1..2313 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21119593..21121904 | 1..2313 | 99 | Plus |
Translation from 216 to 2255
> RH02475.pep MSVSWSKTFAAFTVAWLSALCLLPVETFCDTSYYEKYYAARRYVPLKRNA PLVFNFTLTLPDADQLASFERPALVGNLPVLGAWQAGRAVLLNRTAILNV WSASVEIPQNSSVEYRYFAAAVGQSGAVQIRRWESHVQARTFNTTKFSGN RSDEFGLIGNERQLSRGWLQDSGNILQLKLFREALSLEEQPEVGQEKLRL RLQPVDPKTLAPILSSARANVEYVRMAYGDSKLRVQPEYGVPYATGDILM FHVNLEQLDRVAYLVEVYAEQPDEDLVRLLGYSHLLHTSFSGTEGDVSID LISPLWQRVVGQLRIEYLHIRPMEKDGFDLRTSFANYWRSNWTALEIGHR GLGKSLTVTTNAAPLIENTVATMLASSELGADLVEFDVQLTSDLVPIIHH DFSIRVCIDSKTPTSKDDLTEVLLKDISYEQLKDLKTYQIVGNKIVEYPA HNNVEPPEQRLFPTLQDFFERVNLSTGFDIEIKWPQQRADGLFESEQTLD KNLFADRILAVVRRHGCGRLNVIKSFDADLCSLLRFKQHMYPVLFLSSSK ENVFNDPRTSTVEQSVNFAQAFDLGGVSPNAVFVKADPGLVQRAKAQVPI VLLWGSDLKDRESIDWFLQQGPTGVIYDRLDLWLGANRTSAFEAEQDLPG YFQLQCDPAPKEREVNSTIESILSNVNFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11933-PA | 679 | GF11933-PA | 1..679 | 1..679 | 3143 | 85.1 | Plus |
Dana\GF10791-PA | 653 | GF10791-PA | 56..651 | 54..656 | 1028 | 37.1 | Plus |
Dana\GF15249-PA | 706 | GF15249-PA | 58..681 | 66..662 | 839 | 32.2 | Plus |
Dana\GF10793-PA | 695 | GF10793-PA | 66..645 | 50..631 | 736 | 31.7 | Plus |
Dana\GF17237-PA | 737 | GF17237-PA | 52..686 | 65..631 | 605 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22087-PA | 679 | GG22087-PA | 1..679 | 1..679 | 3381 | 93.2 | Plus |
Dere\GG13436-PA | 653 | GG13436-PA | 56..651 | 54..656 | 1029 | 37.1 | Plus |
Dere\GG24960-PA | 707 | GG24960-PA | 55..682 | 65..662 | 830 | 31.3 | Plus |
Dere\GG13438-PA | 697 | GG13438-PA | 68..673 | 50..656 | 738 | 32.1 | Plus |
Dere\GG18685-PA | 739 | GG18685-PA | 52..685 | 66..631 | 545 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20718-PA | 679 | GH20718-PA | 1..679 | 3..679 | 2566 | 70.6 | Plus |
Dgri\GH16957-PA | 653 | GH16957-PA | 53..651 | 54..656 | 1029 | 37.5 | Plus |
Dgri\GH13702-PA | 706 | GH13702-PA | 50..660 | 64..632 | 840 | 31.9 | Plus |
Dgri\GH16958-PA | 718 | GH16958-PA | 86..694 | 51..656 | 783 | 34.3 | Plus |
Dgri\GH10111-PA | 735 | GH10111-PA | 41..681 | 55..631 | 508 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9394-PB | 679 | CG9394-PB | 1..679 | 1..679 | 3513 | 100 | Plus |
CG9394-PA | 679 | CG9394-PA | 1..679 | 1..679 | 3513 | 100 | Plus |
CG18135-PB | 636 | CG18135-PB | 39..634 | 54..656 | 1001 | 37 | Plus |
CG18135-PE | 649 | CG18135-PE | 52..647 | 54..656 | 1001 | 37 | Plus |
CG18135-PA | 653 | CG18135-PA | 56..651 | 54..656 | 1001 | 37 | Plus |
CG18135-PC | 711 | CG18135-PC | 114..709 | 54..656 | 1001 | 37 | Plus |
CG18135-PD | 770 | CG18135-PD | 173..768 | 54..656 | 1001 | 37 | Plus |
CG2818-PA | 707 | CG2818-PA | 56..682 | 66..662 | 799 | 31.2 | Plus |
CG11619-PA | 699 | CG11619-PA | 71..675 | 51..656 | 726 | 31.6 | Plus |
CG2818-PB | 521 | CG2818-PB | 50..496 | 215..662 | 667 | 33.4 | Plus |
CG3942-PA | 739 | CG3942-PA | 56..685 | 70..631 | 528 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20802-PA | 674 | GI20802-PA | 5..674 | 7..679 | 2478 | 68.9 | Plus |
Dmoj\GI11816-PA | 655 | GI11816-PA | 58..653 | 54..656 | 1008 | 37.6 | Plus |
Dmoj\GI23897-PA | 704 | GI23897-PA | 51..658 | 64..632 | 808 | 30.9 | Plus |
Dmoj\GI11818-PA | 693 | GI11818-PA | 69..668 | 53..656 | 770 | 33.7 | Plus |
Dmoj\GI14466-PA | 725 | GI14466-PA | 58..686 | 70..631 | 491 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21983-PA | 668 | GL21983-PA | 71..666 | 54..656 | 1060 | 37.8 | Plus |
Dper\GL18669-PA | 706 | GL18669-PA | 56..681 | 64..662 | 824 | 31.7 | Plus |
Dper\GL22006-PA | 692 | GL22006-PA | 116..668 | 101..656 | 685 | 31.9 | Plus |
Dper\GL22271-PA | 740 | GL22271-PA | 60..687 | 70..631 | 562 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21756-PA | 685 | GA21756-PA | 11..685 | 7..679 | 2762 | 75.7 | Plus |
Dpse\GA14809-PA | 670 | GA14809-PA | 73..668 | 54..656 | 1058 | 37.8 | Plus |
Dpse\GA15473-PA | 706 | GA15473-PA | 56..681 | 64..662 | 820 | 31.6 | Plus |
Dpse\GA11101-PA | 686 | GA11101-PA | 59..662 | 51..656 | 726 | 32.1 | Plus |
Dpse\GA17792-PA | 740 | GA17792-PA | 56..687 | 66..631 | 559 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15804-PA | 679 | GM15804-PA | 1..679 | 1..679 | 3538 | 97.8 | Plus |
Dsec\GM14904-PA | 653 | GM14904-PA | 56..651 | 54..656 | 1038 | 37.4 | Plus |
Dsec\GM18429-PA | 707 | GM18429-PA | 56..682 | 66..662 | 828 | 31.2 | Plus |
Dsec\GM14906-PA | 697 | GM14906-PA | 68..673 | 50..656 | 736 | 31.5 | Plus |
Dsec\GM24007-PA | 739 | GM24007-PA | 56..685 | 70..631 | 528 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11563-PA | 490 | GD11563-PA | 10..490 | 199..679 | 2517 | 97.5 | Plus |
Dsim\GD12312-PA | 636 | GD12312-PA | 39..634 | 54..656 | 1037 | 37.4 | Plus |
Dsim\GD23248-PA | 707 | GD23248-PA | 56..682 | 66..662 | 828 | 31.2 | Plus |
Dsim\GD17913-PA | 483 | GD17913-PA | 6..459 | 197..656 | 642 | 33.1 | Plus |
Dsim\GD18806-PA | 739 | GD18806-PA | 56..685 | 70..631 | 538 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20535-PA | 680 | GJ20535-PA | 1..680 | 1..679 | 2638 | 72.4 | Plus |
Dvir\GJ13519-PA | 656 | GJ13519-PA | 59..654 | 54..656 | 1003 | 37.4 | Plus |
Dvir\GJ21158-PA | 708 | GJ21158-PA | 55..662 | 64..632 | 828 | 32.2 | Plus |
Dvir\GJ13521-PA | 698 | GJ13521-PA | 68..673 | 51..656 | 778 | 34.6 | Plus |
Dvir\GJ16268-PA | 724 | GJ16268-PA | 52..684 | 66..631 | 443 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20974-PA | 675 | GK20974-PA | 1..675 | 3..679 | 2626 | 71.4 | Plus |
Dwil\GK12569-PA | 648 | GK12569-PA | 53..646 | 54..656 | 1041 | 37.4 | Plus |
Dwil\GK14645-PA | 710 | GK14645-PA | 54..685 | 64..662 | 822 | 31.9 | Plus |
Dwil\GK12589-PA | 694 | GK12589-PA | 65..670 | 50..656 | 722 | 31.7 | Plus |
Dwil\GK11537-PA | 434 | GK11537-PA | 57..416 | 70..405 | 326 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12167-PA | 490 | GE12167-PA | 10..490 | 199..679 | 2426 | 93.3 | Plus |
Dyak\GE22533-PA | 653 | GE22533-PA | 56..651 | 54..656 | 1014 | 37 | Plus |
Dyak\GE18251-PA | 708 | GE18251-PA | 55..683 | 65..662 | 839 | 31.5 | Plus |
Dyak\GE22535-PA | 966 | GE22535-PA | 71..635 | 51..617 | 704 | 31.8 | Plus |
Dyak\GE22535-PA | 966 | GE22535-PA | 635..964 | 330..656 | 697 | 41.9 | Plus |
Dyak\GE26167-PA | 739 | GE26167-PA | 52..685 | 66..631 | 586 | 28.3 | Plus |
Translation from 216 to 2255
> RH02475.hyp MSVSWSKTFAAFTVAWLSALCLLPVETFCDTSYYEKYYAARRYVPLKRNA PLVFNFTLTLPDADQLASFERPALVGNLPVLGAWQAGRAVLLNRTAILNV WSASVEIPQNSSVEYRYFAAAVGQSGAVQIRRWESHVQARTFNTTKFSGN RSDEFGLIGNERQLSRGWLQDSGNILQLKLFREALSLEEQPEVGQEKLRL RLQPVDPKTLAPILSSARANVEYVRMAYGDSKLRVQPEYGVPYATGDILM FHVNLEQLDRVAYLVEVYAEQPDEDLVRLLGYSHLLHTSFSGTEGDVSID LISPLWQRVVGQLRIEYLHIRPMEKDGFDLRTSFANYWRSNWTALEIGHR GLGKSLTVTTNAAPLIENTVATMLASSELGADLVEFDVQLTSDLVPIIHH DFSIRVCIDSKTPTSKDDLTEVLLKDISYEQLKDLKTYQIVGNKIVEYPA HNNVEPPEQRLFPTLQDFFERVNLSTGFDIEIKWPQQRADGLFESEQTLD KNLFADRILAVVRRHGCGRLNVIKSFDADLCSLLRFKQHMYPVLFLSSSK ENVFNDPRTSTVEQSVNFAQAFDLGGVSPNAVFVKADPGLVQRAKAQVPI VLLWGSDLKDRESIDWFLQQGPTGVIYDRLDLWLGANRTSAFEAEQDLPG YFQLQCDPAPKEREVNSTIESILSNVNFL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9394-PB | 679 | CG9394-PB | 1..679 | 1..679 | 3513 | 100 | Plus |
CG9394-PA | 679 | CG9394-PA | 1..679 | 1..679 | 3513 | 100 | Plus |
CG18135-PB | 636 | CG18135-PB | 39..634 | 54..656 | 1001 | 37 | Plus |
CG18135-PE | 649 | CG18135-PE | 52..647 | 54..656 | 1001 | 37 | Plus |
CG18135-PA | 653 | CG18135-PA | 56..651 | 54..656 | 1001 | 37 | Plus |