BDGP Sequence Production Resources |
Search the DGRC for RH03221
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 32 |
Well: | 21 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Acp1-RA |
Protein status: | RH03221.pep: gold |
Sequenced Size: | 873 |
Gene | Date | Evidence |
---|---|---|
CG7216 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31904 | 2002-05-16 | Blastp of sequenced clone |
Acp1 | 2008-04-29 | Release 5.5 accounting |
Acp1 | 2008-08-15 | Release 5.9 accounting |
Acp1 | 2008-12-18 | 5.12 accounting |
873 bp (873 high quality bases) assembled on 2002-05-16
GenBank Submission: AY119158
> RH03221.complete GATCAGTTCAGAACAAGAGTTCAACCAGAGCGCAACCCAAAACCCACAAA CAGCACCATGAAATTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCA TGGGCGTGCAGTCGTCTGTGATCCCCCTGCTGTCCCAGGTGGCTGGACAT GGACTGTCCTACACCGCCGTTTCCGGACCCGCTGTGGTGGCCTCTCCCTG GGCCGTTCCCGCCGCCCACTGGCCTGCTGCCGTGAACGTGGCTTCGTGGC CTCCGGCAGCGATCCACGCCGCCGCTCCTGCCGTGCTTGCTGCCCCTGCT CCCGCTGTGGTTGCTGCTCATGCTCCCTCAGTCGTCGTGGCCCCAGTGGC TCACAGTGGCGTCTACACTGCCCAGACCCGTGGTGCCATTCACACCGCTC CTCTGGCCGGACACATCCAGTCGGTGGCCTCCATCAATGCCGCTCCCGCA CCCGGAACCTTGTAAGGAGTATACCGCCTTCAATCCCTTTGTCGATCGGA CCATTGCCTCTGCCACGGATACTGCCATTGATGGGGAAGTCGAACTTTAG ACCCCTCAACACGTTATGTAAATACATTGTATATATAGCCATATATAGAC AGGGTACTCGCACCTAGCACCTGAACAGGATCCTTTCATACCTGTCCCGA AAAAAAGGAGTCATCAAAATTCTCTTCCGACCTAAGCACCCGGCCACGTT TGTGGTTGCCTATTTCTCTCGCTTACCTATTTATTTAGCATACATTTTCC AAGCATCCTGTGAAAAAACCATCACAAGTTTTCTTCGAACGGAATGCCAA GTGCATTCTGGAAGGAAATGCTTGTACATCTACATAATGCCAATAAAGAA AATGTAACTAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Acp1-RA | 1011 | Acp1-RA | 143..1004 | 1..862 | 4310 | 100 | Plus |
CG31904-RB | 3562 | CG31904-RB | 3120..3554 | 428..862 | 2175 | 100 | Plus |
CG31904-RD | 2030 | CG31904-RD | 1588..2022 | 428..862 | 2175 | 100 | Plus |
CG31904-RB | 3562 | CG31904-RB | 2767..3121 | 64..418 | 1775 | 100 | Plus |
CG31904-RD | 2030 | CG31904-RD | 1235..1589 | 64..418 | 1775 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 7739660..7740455 | 859..64 | 3935 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 7733520..7734304 | 859..64 | 3780 | 98.6 | Minus |
chr2L | 23010047 | chr2L | 7740574..7740636 | 63..1 | 315 | 100 | Minus |
chr2L | 23010047 | chr2L | 7743305..7743401 | 466..370 | 185 | 79.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 7740559..7741357 | 862..64 | 3995 | 100 | Minus |
2L | 23513712 | 2L | 7734419..7735206 | 862..64 | 3795 | 98.6 | Minus |
2L | 23513712 | 2L | 7741476..7741538 | 63..1 | 315 | 100 | Minus |
2L | 23513712 | 2L | 7744207..7744303 | 466..370 | 185 | 79.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 7740559..7741357 | 862..64 | 3995 | 100 | Minus |
2L | 23513712 | 2L | 7734419..7734853 | 862..428 | 2175 | 100 | Minus |
2L | 23513712 | 2L | 7734852..7735206 | 418..64 | 1775 | 100 | Minus |
2L | 23513712 | 2L | 7741476..7741538 | 63..1 | 315 | 100 | Minus |
2L | 23513712 | 2L | 7744207..7744303 | 466..370 | 185 | 79.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 677..728 | 268..322 | 114 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 7739660..7740455 | 64..859 | 99 | <- | Minus |
chr2L | 7740574..7740636 | 1..63 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 1..408 | 58..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 1..408 | 58..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31904-RD | 670..1212 | 64..617 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 1..408 | 58..465 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31904-RD | 670..1212 | 64..617 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 5..863 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 5..863 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 1..858 | 2..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 5..863 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Acp1-RA | 1..858 | 2..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7740562..7741357 | 64..859 | 100 | <- | Minus |
2L | 7741476..7741538 | 1..63 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7740562..7741357 | 64..859 | 100 | <- | Minus |
2L | 7741476..7741538 | 1..63 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7740562..7741357 | 64..859 | 100 | <- | Minus |
2L | 7741476..7741538 | 1..63 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 7740562..7741357 | 64..859 | 100 | <- | Minus |
arm_2L | 7741476..7741538 | 1..63 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7740562..7741357 | 64..859 | 100 | <- | Minus |
2L | 7741476..7741538 | 1..63 | 100 | Minus |
Translation from 2 to 616
> RH03221.hyp SVQNKSSTRAQPKTHKQHHEIRRRRYLHLGPRHGRAVVCDPPAVPGGWTW TVLHRRFRTRCGGLSLGRSRRPLACCRERGFVASGSDPRRRSCRACCPCS RCGCCSCSLSRRGPSGSQWRLHCPDPWCHSHRSSGRTHPVGGLHQCRSRT RNLVRSIPPSIPLSIGPLPLPRILPLMGKSNFRPLNTLCKYIVYIAIYRQ GTRT*
Translation from 57 to 464
> RH03221.pep MKFAVAVIFTLALAMGVQSSVIPLLSQVAGHGLSYTAVSGPAVVASPWAV PAAHWPAAVNVASWPPAAIHAAAPAVLAAPAPAVVAAHAPSVVVAPVAHS GVYTAQTRGAIHTAPLAGHIQSVASINAAPAPGTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14586-PA | 134 | GF14586-PA | 1..134 | 1..135 | 316 | 81.5 | Plus |
Dana\GF14585-PA | 145 | GF14585-PA | 1..145 | 1..135 | 172 | 40.1 | Plus |
Dana\GF14584-PA | 138 | GF14584-PA | 1..138 | 1..135 | 150 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23512-PA | 133 | GG23512-PA | 1..133 | 1..135 | 579 | 96.3 | Plus |
Dere\GG23510-PA | 150 | GG23510-PA | 17..149 | 1..134 | 181 | 48.2 | Plus |
Dere\GG23511-PA | 142 | GG23511-PA | 1..142 | 1..135 | 161 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10483-PA | 136 | GH10483-PA | 1..136 | 1..135 | 428 | 81 | Plus |
Dgri\GH13216-PA | 129 | GH13216-PA | 1..129 | 1..135 | 161 | 49.3 | Plus |
Dgri\GH10481-PA | 147 | GH10481-PA | 110..147 | 98..135 | 138 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Acp1-PA | 135 | CG7216-PA | 1..135 | 1..135 | 678 | 100 | Plus |
CG31904-PB | 403 | CG31904-PB | 224..341 | 3..120 | 596 | 100 | Plus |
CG31904-PD | 403 | CG31904-PD | 224..341 | 3..120 | 596 | 100 | Plus |
CG7203-PC | 129 | CG7203-PC | 1..128 | 1..134 | 276 | 52.9 | Plus |
CG7203-PB | 129 | CG7203-PB | 1..128 | 1..134 | 276 | 52.9 | Plus |
CG7214-PA | 142 | CG7214-PA | 1..142 | 1..135 | 211 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18000-PA | 144 | GI18000-PA | 1..144 | 1..135 | 463 | 72.4 | Plus |
Dmoj\GI17999-PA | 142 | GI17999-PA | 1..142 | 1..135 | 160 | 40.1 | Plus |
Dmoj\GI14512-PA | 125 | GI14512-PA | 1..125 | 1..135 | 132 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18854-PA | 129 | GL18854-PA | 1..129 | 1..135 | 411 | 73.9 | Plus |
Dper\GL18852-PA | 399 | GL18852-PA | 283..398 | 11..134 | 155 | 47.2 | Plus |
Dper\GL18853-PA | 148 | GL18853-PA | 93..148 | 71..135 | 153 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25829-PA | 136 | GA25829-PA | 1..136 | 1..135 | 393 | 71.1 | Plus |
Dpse\GA20178-PA | 126 | GA20178-PA | 1..125 | 1..134 | 173 | 48.1 | Plus |
Dpse\GA20185-PA | 148 | GA20185-PA | 93..148 | 71..135 | 153 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13384-PA | 135 | GM13384-PA | 1..135 | 1..135 | 604 | 98.5 | Plus |
Dsec\GM13372-PA | 142 | GM13372-PA | 1..142 | 1..135 | 161 | 40.4 | Plus |
Dsec\GM13361-PA | 129 | GM13361-PA | 1..128 | 1..134 | 154 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22473-PA | 135 | GD22473-PA | 1..135 | 1..135 | 604 | 98.5 | Plus |
Dsim\GD22472-PA | 142 | GD22472-PA | 1..142 | 1..135 | 161 | 40.4 | Plus |
Dsim\GD22471-PA | 145 | GD22471-PA | 17..144 | 1..134 | 157 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19615-PA | 131 | GJ19615-PA | 1..131 | 1..135 | 448 | 79.3 | Plus |
Dvir\GJ19614-PA | 142 | GJ19614-PA | 1..142 | 1..135 | 163 | 39.7 | Plus |
Dvir\GJ16283-PA | 130 | GJ16283-PA | 1..129 | 1..134 | 138 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24644-PA | 137 | GK24644-PA | 1..137 | 1..135 | 411 | 78.1 | Plus |
Dwil\GK24642-PA | 146 | GK24642-PA | 1..146 | 1..135 | 194 | 47.4 | Plus |
Dwil\GK24643-PA | 138 | GK24643-PA | 98..138 | 95..135 | 156 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18339-PA | 135 | GE18339-PA | 1..135 | 1..135 | 606 | 98.5 | Plus |
Dyak\GE18338-PA | 142 | GE18338-PA | 1..142 | 1..135 | 161 | 40.4 | Plus |
Dyak\GE18337-PA | 138 | GE18337-PA | 1..137 | 1..134 | 143 | 39 | Plus |