Clone RH03539 Report

Search the DGRC for RH03539

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:35
Well:39
Vector:pFlc-1
Associated Gene/Transcriptdpr16-RA
Protein status:RH03539.pep: wuzgold
Sequenced Size:3071

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12590 2002-01-01 Sim4 clustering to Release 2
CG12591 2002-05-31 Blastp of sequenced clone
CG12591 2003-01-01 Sim4 clustering to Release 3
dpr16 2008-04-29 Release 5.5 accounting
dpr16 2008-08-15 Release 5.9 accounting
dpr16 2008-12-18 5.12 accounting

Clone Sequence Records

RH03539.complete Sequence

3071 bp (3071 high quality bases) assembled on 2002-05-31

GenBank Submission: AY118422

> RH03539.complete
GACACTTTGAATCGAATCGCGAAATGGTCCGGATTCAGTTTCAAATTTGC
ATGGCATAGCGGCGGACGTAGAGCGGGAACAAAGCGCAAATTTCGGAAAT
CATTAATAAGGAAGCATACGTTTGAATTATTCGCGGCGCGCGATTGTGGG
TCTCGAAAGTGAATGCACTTGGCACCTCCGCACCCAAAATCGGATTCTCG
AACGGATTCTGATTTATCGCCGGCCGGTCTTTCATTGTGCGTATCTGTGC
CAACCAGAATGTGGGCGTGTCCGCCTCCGCCCCCCGCCGCGCCACAGAGT
AAAGTGTCGCGAAGTGAAGTGCGAGAATGCCCGCCCTCGATTTCCGCAAG
AGTGCTGTGAAATCCTGTGAGCTACGATTCCTGGCTGCTGCGGTTGGCCT
GCCAAATAAAGCAAGAAATAAGTTAAAACATACGTTCTGTGCGGTCTGAC
TCGGTGGAATAGAAGAAATCCTGGCCAACTGGCGGAGCAGCCCAGTCACG
TCCGCACCACCACAACTACTGCTCCTCCGGCACAGTGCGGTATGCAAATT
CAACCGAGAAGACTTCATAAAAGCAATGCAAATAATTAAATAACAACGCG
GAGCAAACAGCACGCAGCAGCATGACATGCTACTTGAGTCGGCGAAACTT
GGATTAACTAGCTGTGCGAAATAAATACGAAATACGAAATACGAAATACC
AAGCACCAAACCAAATACGAAATCTGAACGTTAATCCCAAACCAATCCCA
GCTCCGTTCCGCCCAGGTGCGACATCCGACAGTTGCCGATGCCCTCGCCC
AGCGGAATGTCCTGGCGGCAGAGGGAGCGCGGCGCAGGAGGAACTCCAGG
TGGACGAGGGGCAGGCATCCTGGCCGGGAGCGGGAGGAGTCCGGGAACTG
CCAGCATACTGCTGGCGTTTCTGGCAGCTGTCAGCTTTCGTGGCATGCGA
GCGCCGCTAGCAGCCACGGCCACTCCGATGGAGAACGCCTCGCTAATTGC
CTCGCCTGCGACGGGGACAAGCACAATGGGATCGGCAGGATCTCCTGTCC
TGATGCTGGGCGATGACCAACAGCAGCAGGAGTACGACACAACCGTGGTG
GATTCGTGGAGCGACAGGCCGGACACTGCGACGCTAACAAAGGGTTTCTC
GATTCCCTCGTACTTGCCACCCTTTCCGGAATTCATACCAGCCGATTTGC
CTCACATGCTGCGGAATGCCTCCTCCGGAGCAGCTCCTCCCGCGGACATC
GGCCCGTCCGGCAGTCCGATGCCATCTAAGCCCAACGAGCAGTCCCGTCT
CCACGCCTACGACAGCGAACAAAAGGCCCAGCAGCTGCGGCGAGAGAAGG
AGCTGGCCAAGGAACGGGAGCTCCTGCCACGCCGCCAGCTCAGCCTGCCC
CCGCTGAACGCCACCGTCCAAGCTGGCCAACATGCCTATCTGCCGTGCAA
GGTAAGTGAAGGATTGGGAATGGGGATGGGTTCGGAGGCCATATGGGAAC
AATGTGGAGCCATTCAGTTGAGTGAGGAGGCTACTTTGTAATGGGGTTTC
TAAGCCACACAATTGTAAATCTTGTTGGTGACGCGAAATGCAGAATAATG
AATGAACTTATTGGTGAGGGCGCAAGCCTACTTCCAAACTCCTTTGTCCA
TTACAAGCAACATACAAATAATATCCATGATAATTCGCACCTGCAGCTCA
ACCAGCACTCGGGAAAACCGCTCTCCTGGGTTCGGTTGCGGGATGAACAT
ATCATTGCGGTGGATCACACAACCTTTATCAACGATGCCCGGTTCGCATC
GCTGCTCCAGTCGACCACCTTGACGACACTTGTATCCGGAGGGGCCCTGT
CCACAACTGCGACGCCCGTCGCTGCCCTGGGCAACTCCTTCGCCCACGCT
GTTCCTGGGGGTCAGGAGAGGGGCAACAGCAGCAGCCTCAGCTGGACGCT
GCAAATCAAGTATGTGAATCTGGAGGACGCCGGCTGGTACGAGTGCCAGC
TGGCAACGGAGCCCAAAATGAGCGCCAAGGTGCAGCTGTTTGTGATAACA
CCCCGAACCGAGCTAATCGGCGATCGGCAGCGCTTTGTGAAGGCCGGCAG
CAGGGTGGAGCTGCACTGCATCGTACGTGGCACCCTGGAGGCCCCCAAGT
ATATCTTCTGGTACCGTGGCGACCAACAAGTGACTGCCGAAAACGAGGCC
AGCGGCGCCCAGAGCGGATGGTACACGCAAATCGACCGGAATATCTTCGG
CAGCACCGAGCACAATCGGAACACGATTGGTTCCCTGGTCATTCCTCTGG
TGCGCAAGATTCACTCCGGCAACTACACGTGTGAGCCGGAAAACAGTGCG
GCAGCTTCTATGCAGTTGCACGTCCTGAGCGGGGAATATTCTGCCTCCGC
CATAAAGTCGACTGCTGCTAGGCCCCACAGACTGGGTCACGGGTACACTA
GTCTACACCAGTGGCTAATCTTTCTTTTGGTGGCCCTGAACAAGACATGA
TTACTCCTTGGAGTCCTGGGAAAAGTCCCACCATGAGGAGCGCTGGAATT
ATCATATGGTCGGGTGTTTTGTCTAAGACATTAGTTTAACCTCTAGGTAA
AATGCACTCAAGCGATTACATTGTTTATTCTGCTGATACTTCTTTAAGTC
AGAGCCGAACTTTCCGGCAAAAACCAAAAACTTTTTTATACAAATTCTAG
ACATAACAATGTTTCCTTTACTCTAGTAATAGACCTAGTTCACTAAGTAT
TATAATAAGGAACTAATTCTGACAACCGGTTATTTGTTATTTGCGTAAAA
AAAGCCAGAGACGTATTGTTTTTAAATATTTGCAGATTTGATTTATTTGT
AGGATTTCTTAAAATGTATTTATTAACATGTTTATTAAGAAATTCTGTTC
GTCATTTGAAATTGCACTAAAACCACATATTAATTTTCCCATTAAATTGT
AAAAAGAACAATACTTGAAATGTGAACTATATTAGCAAAAAGTATTTCAA
CTTTTAAAGATGTAAAGCAACTGATACTACTTAATAAAGAACTAATTGTT
AAAATAAAAAAAAAAAAAAAA

RH03539.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
dpr16-RA 3077 dpr16-RA 19..3072 2..3056 15220 99.9 Plus
dpr16-RB 1939 dpr16-RB 581..1939 1695..3053 6780 99.9 Plus
dpr16-RB 1939 dpr16-RB 86..582 955..1451 2485 100 Plus
dpr17-RC 2547 dpr17-RC 1786..1875 2081..2170 255 85.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:17:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 991009..992102 955..2048 5470 100 Plus
chr3R 27901430 chr3R 995119..995793 2381..3055 3360 99.9 Plus
chr3R 27901430 chr3R 979194..979768 380..954 2875 100 Plus
chr3R 27901430 chr3R 976581..976957 2..379 1840 99.7 Plus
chr3R 27901430 chr3R 992534..992760 2049..2275 1135 100 Plus
chr3R 27901430 chr3R 992830..992937 2275..2382 540 100 Plus
chr3R 27901430 chr3R 7935712..7935801 2081..2170 255 85.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:18:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:17:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5165338..5166431 955..2048 5470 100 Plus
3R 32079331 3R 5169447..5170122 2381..3056 3365 99.9 Plus
3R 32079331 3R 5153523..5154097 380..954 2875 100 Plus
3R 32079331 3R 5150910..5151286 2..379 1840 99.7 Plus
3R 32079331 3R 5166863..5167089 2049..2275 1135 100 Plus
3R 32079331 3R 5167159..5167266 2275..2382 540 100 Plus
3R 32079331 3R 12110323..12110412 2081..2170 255 85.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4906169..4907262 955..2048 5470 100 Plus
3R 31820162 3R 4910278..4910953 2381..3056 3365 99.8 Plus
3R 31820162 3R 4894354..4894928 380..954 2875 100 Plus
3R 31820162 3R 4891741..4892117 2..379 1850 99.7 Plus
3R 31820162 3R 4907694..4907920 2049..2275 1135 100 Plus
3R 31820162 3R 4907990..4908097 2275..2382 540 100 Plus
3R 31820162 3R 11851154..11851243 2081..2170 255 85.5 Plus
Blast to na_te.dros performed on 2019-03-16 14:17:56 has no hits.

RH03539.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:18:38 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 976579..976957 1..379 99 -> Plus
chr3R 979194..979768 380..954 95 -> Plus
chr3R 991009..992102 955..2048 100 -> Plus
chr3R 992534..992760 2049..2275 100 -> Plus
chr3R 992831..992936 2276..2381 100 -> Plus
chr3R 995120..995793 2382..3055 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:56:10 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..960 1541..2500 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:51:43 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..960 1541..2500 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:41:31 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..960 1541..2500 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:34:02 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..960 1541..2500 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:25:54 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RB 27..518 946..1441 99 == Plus
dpr16-RB 519..1332 1687..2500 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:09 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..3055 1..3055 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:51:43 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..3055 1..3055 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:41:31 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..3055 1..3055 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:34:02 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RA 1..3055 1..3055 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:54 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
dpr16-RC 1452..2810 1697..3055 99   Plus
dpr16-RC 1..1451 1..1451 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:18:38 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5166863..5167089 2049..2275 100 -> Plus
3R 5167160..5167265 2276..2381 100 -> Plus
3R 5150908..5151286 1..379 99 -> Plus
3R 5153523..5154097 380..954 100 -> Plus
3R 5165338..5166431 955..2048 100 -> Plus
3R 5169448..5170121 2382..3055 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:18:38 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5166863..5167089 2049..2275 100 -> Plus
3R 5167160..5167265 2276..2381 100 -> Plus
3R 5150908..5151286 1..379 99 -> Plus
3R 5153523..5154097 380..954 100 -> Plus
3R 5165338..5166431 955..2048 100 -> Plus
3R 5169448..5170121 2382..3055 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:18:38 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5166863..5167089 2049..2275 100 -> Plus
3R 5167160..5167265 2276..2381 100 -> Plus
3R 5150908..5151286 1..379 99 -> Plus
3R 5153523..5154097 380..954 100 -> Plus
3R 5165338..5166431 955..2048 100 -> Plus
3R 5169448..5170121 2382..3055 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:41:31 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 976630..977008 1..379 99 -> Plus
arm_3R 979245..979819 380..954 100 -> Plus
arm_3R 991060..992153 955..2048 100 -> Plus
arm_3R 992585..992811 2049..2275 100 -> Plus
arm_3R 992882..992987 2276..2381 100 -> Plus
arm_3R 995170..995843 2382..3055 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:15:15 Download gff for RH03539.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4891739..4892117 1..379 99 -> Plus
3R 4894354..4894928 380..954 100 -> Plus
3R 4906169..4907262 955..2048 100 -> Plus
3R 4907694..4907920 2049..2275 100 -> Plus
3R 4907991..4908096 2276..2381 100 -> Plus
3R 4910279..4910952 2382..3055 99   Plus

RH03539.pep Sequence

Translation from 1540 to 2499

> RH03539.pep
MGFLSHTIVNLVGDAKCRIMNELIGEGASLLPNSFVHYKQHTNNIHDNSH
LQLNQHSGKPLSWVRLRDEHIIAVDHTTFINDARFASLLQSTTLTTLVSG
GALSTTATPVAALGNSFAHAVPGGQERGNSSSLSWTLQIKYVNLEDAGWY
ECQLATEPKMSAKVQLFVITPRTELIGDRQRFVKAGSRVELHCIVRGTLE
APKYIFWYRGDQQVTAENEASGAQSGWYTQIDRNIFGSTEHNRNTIGSLV
IPLVRKIHSGNYTCEPENSAAASMQLHVLSGEYSASAIKSTAARPHRLGH
GYTSLHQWLIFLLVALNKT*

RH03539.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18926-PA 457 GF18926-PA 186..457 52..319 1133 83.2 Plus
Dana\GF17231-PA 560 GF17231-PA 323..541 46..305 709 52.5 Plus
Dana\GF16651-PA 389 GF16651-PA 168..353 51..282 459 40.5 Plus
Dana\GF17744-PA 653 GF17744-PA 200..336 53..233 336 39.2 Plus
Dana\GF13213-PA 430 GF13213-PA 218..390 61..286 279 31.4 Plus
Dana\GF17744-PA 653 GF17744-PA 513..558 245..290 157 67.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12638-PA 410 GG12638-PA 143..410 52..319 1356 94.4 Plus
Dere\GG18619-PA 724 GG18619-PA 488..694 52..300 708 53.8 Plus
Dere\GG10424-PA 471 GG10424-PA 294..435 135..282 403 50.7 Plus
Dere\GG17157-PA 676 GG17157-PA 190..349 32..233 339 37.3 Plus
Dere\GG21004-PA 346 GG21004-PA 134..306 61..286 281 31.4 Plus
Dere\GG17157-PA 676 GG17157-PA 538..583 245..290 158 67.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17698-PA 406 GH17698-PA 151..406 52..319 1035 74.6 Plus
Dgri\GH17311-PA 669 GH17311-PA 426..625 52..293 687 55 Plus
Dgri\GH17309-PA 300 GH17309-PA 68..264 42..282 461 39.9 Plus
Dgri\GH15510-PA 592 GH15510-PA 108..267 32..233 335 37.3 Plus
Dgri\GH20455-PA 376 GH20455-PA 164..336 61..286 277 31.4 Plus
Dgri\GH15510-PA 592 GH15510-PA 435..483 245..293 156 63.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
dpr16-PC 488 CG12591-PC 221..488 52..319 1390 99.6 Plus
dpr16-PB 443 CG12591-PB 176..443 52..319 1390 99.6 Plus
dpr17-PE 508 CG31361-PE 243..477 25..299 675 49.8 Plus
dpr17-PC 508 CG31361-PC 243..477 25..299 675 49.8 Plus
dpr17-PB 508 CG31361-PB 243..477 25..299 675 49.8 Plus
dpr17-PD 664 CG31361-PD 399..633 25..299 675 49.8 Plus
dpr17-PA 664 CG31361-PA 399..633 25..299 675 49.8 Plus
dpr11-PC 360 CG33202-PC 128..335 42..293 470 40.6 Plus
dpr11-PB 360 CG33202-PB 128..335 42..293 470 40.6 Plus
dpr15-PB 662 CG10095-PB 219..349 59..233 315 40.6 Plus
dpr15-PA 662 CG10095-PA 219..349 59..233 315 40.6 Plus
dpr4-PB 323 CG33512-PB 66..249 50..286 277 29.5 Plus
dpr13-PB 419 CG33996-PB 207..411 61..306 274 29.8 Plus
dpr6-PA 283 CG14162-PA 101..276 57..283 269 29.5 Plus
dpr6-PC 390 CG14162-PC 101..276 57..283 268 29.5 Plus
dpr6-PE 283 CG14162-PE 101..277 57..284 264 29.4 Plus
dpr13-PC 418 CG33996-PC 207..410 61..306 264 29.8 Plus
dpr10-PD 362 CG32057-PD 78..265 55..293 263 30 Plus
dpr9-PB 602 CG33485-PB 292..483 61..294 257 30.4 Plus
dpr9-PA 602 CG33485-PA 292..483 61..294 257 30.4 Plus
dpr6-PF 396 CG14162-PF 101..303 57..314 256 27.9 Plus
dpr6-PD 286 CG14162-PD 101..273 57..280 255 29 Plus
dpr21-PC 282 CG42596-PC 59..261 39..290 251 25.2 Plus
dpr12-PE 296 CG34385-PE 67..278 43..305 244 28 Plus
dpr1-PB 367 CG13439-PB 74..265 50..286 244 30.3 Plus
dpr1-PA 367 CG13439-PA 74..265 50..286 244 30.3 Plus
dpr5-PB 298 CG5308-PB 73..262 50..299 240 26.8 Plus
dpr5-PA 336 CG5308-PA 111..300 50..299 240 26.8 Plus
dpr12-PD 321 CG34385-PD 109..303 61..305 234 28 Plus
dpr12-PC 326 CG34385-PC 114..308 61..305 234 28 Plus
dpr8-PB 344 CG32600-PB 72..262 59..295 231 26.4 Plus
dpr8-PA 344 CG32600-PA 72..262 59..295 231 26.4 Plus
dpr10-PC 408 CG32057-PC 78..311 55..293 206 25.2 Plus
dpr10-PB 408 CG32057-PB 78..311 55..293 206 25.2 Plus
dpr10-PA 408 CG32057-PA 78..311 55..293 206 25.2 Plus
dpr2-PG 410 CG33507-PG 136..335 59..294 202 28.3 Plus
dpr2-PF 410 CG33507-PF 136..335 59..294 202 28.3 Plus
dpr7-PG 286 CG33481-PG 48..255 52..294 201 27.2 Plus
dpr7-PF 312 CG33481-PF 74..281 52..294 201 27.2 Plus
dpr14-PB 340 CG10946-PB 95..295 50..294 187 22.6 Plus
dpr14-PA 340 CG10946-PA 95..295 50..294 187 22.6 Plus
dpr15-PB 662 CG10095-PB 524..583 245..302 157 58.3 Plus
dpr15-PA 662 CG10095-PA 524..583 245..302 157 58.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22538-PA 506 GI22538-PA 258..506 52..319 958 72.8 Plus
Dmoj\GI10273-PA 647 GI10273-PA 411..610 52..293 697 55.4 Plus
Dmoj\GI10269-PA 352 GI10269-PA 120..316 42..282 459 39.9 Plus
Dmoj\GI22469-PA 710 GI22469-PA 213..372 32..233 339 37.3 Plus
Dmoj\GI19284-PA 375 GI19284-PA 162..334 61..286 278 31.4 Plus
Dmoj\GI22469-PA 710 GI22469-PA 554..599 245..290 157 67.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21631-PA 438 GL21631-PA 136..438 14..319 1149 76.5 Plus
Dper\GL22265-PA 696 GL22265-PA 455..654 52..293 692 54.1 Plus
Dper\GL22062-PA 456 GL22062-PA 235..420 51..282 459 40.5 Plus
Dper\GL21574-PA 682 GL21574-PA 218..377 32..233 336 36.8 Plus
Dper\GL10546-PA 404 GL10546-PA 192..364 61..286 280 31.4 Plus
Dper\GL21574-PA 682 GL21574-PA 551..596 245..290 158 67.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11707-PA 443 GA11707-PA 180..443 52..319 1154 83.6 Plus
Dpse\GA11707-PB 213 GA11707-PB 2..213 106..319 945 86.9 Plus
Dpse\GA16209-PB 557 GA16209-PB 316..515 52..293 694 54.1 Plus
Dpse\GA16209-PA 690 GA16209-PA 449..648 52..293 692 54.1 Plus
Dpse\GA27362-PB 356 GA27362-PB 124..320 42..282 458 39.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10791-PA 409 GM10791-PA 142..409 52..319 1394 97 Plus
Dsec\GM23998-PA 663 GM23998-PA 427..633 52..300 708 53.8 Plus
Dsec\GM26040-PA 458 GM26040-PA 3..148 43..233 336 38.7 Plus
Dsec\GM19938-PA 364 GM19938-PA 152..324 61..286 281 31.4 Plus
Dsec\GM10551-PA 151 GM10551-PA 8..115 169..282 268 44.7 Plus
Dsec\GM26040-PA 458 GM26040-PA 320..379 245..302 159 58.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19765-PA 409 GD19765-PA 142..409 52..319 1395 97.4 Plus
Dsim\GD18801-PA 663 GD18801-PA 427..633 52..300 712 54.2 Plus
Dsim\GD19543-PA 471 GD19543-PA 294..435 135..282 402 50.7 Plus
Dsim\GD20600-PA 477 GD20600-PA 214..350 53..233 338 40.3 Plus
Dsim\GD25426-PA 274 GD25426-PA 62..234 61..286 278 31.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10142-PA 436 GJ10142-PA 193..436 52..319 1041 75.4 Plus
Dvir\GJ11081-PA 720 GJ11081-PA 483..682 52..293 698 54.5 Plus
Dvir\GJ11075-PA 355 GJ11075-PA 123..319 42..282 464 39.9 Plus
Dvir\GJ10069-PA 611 GJ10069-PA 126..285 32..233 338 37.3 Plus
Dvir\GJ22162-PA 245 GJ22162-PA 31..205 59..286 284 31.6 Plus
Dvir\GJ10069-PA 611 GJ10069-PA 452..497 245..290 157 67.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12959-PA 429 GK12959-PA 167..429 52..319 1105 79.3 Plus
Dwil\GK11531-PA 854 GK11531-PA 622..816 57..293 701 54.9 Plus
Dwil\GK11528-PA 420 GK11528-PA 200..384 52..282 459 40.3 Plus
Dwil\GK11567-PA 558 GK11567-PA 151..287 53..233 335 39.2 Plus
Dwil\GK11007-PA 579 GK11007-PA 314..513 61..316 286 27.7 Plus
Dwil\GK11567-PA 558 GK11567-PA 436..517 245..319 159 48.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25452-PA 442 GE25452-PA 157..442 29..319 1335 88.7 Plus
Dyak\GE26159-PA 683 GE26159-PA 447..653 52..300 707 53.8 Plus
Dyak\GE24097-PA 499 GE24097-PA 279..463 52..282 454 40.3 Plus
Dyak\GE24547-PA 666 GE24547-PA 213..349 53..233 340 39.8 Plus
Dyak\GE13948-PA 357 GE13948-PA 145..317 61..286 281 31.4 Plus
Dyak\GE24547-PA 666 GE24547-PA 528..573 245..290 159 67.4 Plus

RH03539.hyp Sequence

Translation from 1540 to 2499

> RH03539.hyp
MGFLSHTIVNLVGDAKCRIMNELIGEGASLLPNSFVHYKQHTNNIHDNSH
LQLNQHSGKPLSWVRLRDEHIIAVDHTTFINDARFASLLQSTTLTTLVSG
GALSTTATPVAALGNSFAHAVPGGQERGNSSSLSWTLQIKYVNLEDAGWY
ECQLATEPKMSAKVQLFVITPRTELIGDRQRFVKAGSRVELHCIVRGTLE
APKYIFWYRGDQQVTAENEASGAQSGWYTQIDRNIFGSTEHNRNTIGSLV
IPLVRKIHSGNYTCEPENSAAASMQLHVLSGEYSASAIKSTAARPHRLGH
GYTSLHQWLIFLLVALNKT*

RH03539.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
dpr16-PB 443 CG12591-PB 176..443 52..319 1390 99.6 Plus
dpr16-PC 488 CG12591-PC 221..488 52..319 1390 99.6 Plus
dpr17-PE 508 CG31361-PE 243..477 25..299 675 49.8 Plus
dpr17-PC 508 CG31361-PC 243..477 25..299 675 49.8 Plus
dpr17-PB 508 CG31361-PB 243..477 25..299 675 49.8 Plus