BDGP Sequence Production Resources |
Search the DGRC for RH03631
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 36 |
Well: | 31 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Jheh1-RA |
Protein status: | RH03631.pep: gold |
Preliminary Size: | 1492 |
Sequenced Size: | 1525 |
Gene | Date | Evidence |
---|---|---|
CG15101 | 2002-10-13 | Blastp of sequenced clone |
CG15101 | 2003-01-01 | Sim4 clustering to Release 3 |
Jheh1 | 2008-04-29 | Release 5.5 accounting |
Jheh1 | 2008-08-15 | Release 5.9 accounting |
Jheh1 | 2008-12-18 | 5.12 accounting |
1525 bp (1525 high quality bases) assembled on 2002-10-13
GenBank Submission: BT001753
> RH03631.complete GAGTGGAATCGTAGCTGCTATCCGAGACAGTCTGAGTGGAACCGCTGATA GGAACAGATGGGTGTCACTGTTAAAATTCTGGTCTTGATACTGGCCATTG CCGGTGGGCTGGTCTATAGGAATGTGACCCAACTATGGGCGGACTTGCCC GCACCAAAGTTGGATCCCCAGGAGTGGTGGGGCGATGAGGCGCAGCCCAA GGATTACGAGGCCTATTTGAAGAACAATTCGGAGGTGATAGGCAATAGGC TTAGTTATCCGGATAAGACCATTGCTGATTTGAAAGAGCGTCTCAATCGC ACCCTGCGCCTTACGCCTCCGCTCGAGGGCGTGGCTTTTGAGTACGGATT CAATACGAATTACCTTAAGGAGGTCGTGGAGTACTGGCGCGATGACTACC TGCCGCGTTGGCGCGAACGCGAGGTGTTCCTTTGGCAGTTCAATCACTTC ACCACCGATATTCAGGGGCTACGCACACACTTCCTCCACCTGATGGTTTA TGATGACAACAAAGTGGGTAAGAAACACTATCCGGTGTTGCTGCTCCACG GATGGCCGGGATCGGTGCGGGAGTTTTACGATTTCATACATTTGCTGCAT CAGACCAATCTGGACAATAATAACAAGTACATCTTTAACGTCGTGGTTCC GAGTTTACCAGGTTATGGCTGGTCACAGGGCACCTCCAGAAAAGGACTGG GTCCCGCTCAAGTGGCGGTGATGATGAGGAATCTTATGCTGCGTTTGGGA TACAACAAATTCTTTATCCAGGGTGGAGACTGGGGCAGCATTATTGGCAG CAACATTGCCACCTTGTATCCGGAAAACGTGCTGGGCTACCACTCGAACA TGTGCAACAATTTGAGTCCGAAGTCGCTGGCTAAGGGTTTAGTGGCCGAA TTTTGGCCCAGTTTGTTTGTGCCCTCTGGCTTTGAAGATTTCTTCTTTCC CAAGTCTAACGAGATGAGATACCTAATGGAGGAGAGTGGCTACTTCCACA TCCAGGCCACCAAACCGGACACCATCGGAGCCGCCCTCACCGATAACCCA GTGGGTCTGGCCGCCTACATTCTGGAGAAGTTCTCCACGTGGACAAATCC CAGCTACCGATCTCTGCCAGATGGAGGACTCACTAAGCGCTACAAAATGG ATGCCCTGCTGGACAACCTGATGATCTACTACCTGACCAATTCGATTACC ACCTCCCAGCGTCTCTATGCCGAGCAGTATGCCCAGGCACAGCGGGACCT GCACCTGGATCGGGTTCCCACCCGAGTGCCAACTGGATGTGCCCGTTTCA AGAGCGACATTATGCAGTTCCTGGATGTCCAGTTGAAGGATAAGTACACG AACCTAGTGCACAGCACTTACCACAAAAAGGGCGGGCACTTTGCCGCTCT AGAGGTTCCAAAGGTTCTATACAAGGATTTTATAGACTTTGTCGAAACGG TGGAACGTAAGTTTAAAATTAAGACTCTGTAGATCTTCCAATAAAAGCTT AATTGTTACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jheh1-RA | 1646 | Jheh1-RA | 85..1601 | 2..1518 | 7585 | 100 | Plus |
Jheh3-RA | 1732 | Jheh3-RA | 924..1057 | 722..855 | 340 | 83.5 | Plus |
Jheh3-RA | 1732 | Jheh3-RA | 1182..1246 | 977..1041 | 160 | 83 | Plus |
Jheh2-RC | 1411 | Jheh2-RC | 967..1031 | 1159..1223 | 160 | 83 | Plus |
Jheh3-RA | 1732 | Jheh3-RA | 749..797 | 541..589 | 140 | 85.7 | Plus |
Jheh2-RC | 1411 | Jheh2-RC | 782..836 | 974..1028 | 140 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14740562..14741395 | 1509..676 | 4065 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 14741972..14742237 | 267..2 | 1315 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 14741450..14741662 | 679..467 | 1065 | 100 | Minus |
chr2R | 21145070 | chr2R | 14741715..14741917 | 468..266 | 1015 | 100 | Minus |
chr2R | 21145070 | chr2R | 14748150..14748283 | 855..722 | 340 | 83.6 | Minus |
chr2R | 21145070 | chr2R | 14747901..14748025 | 1101..977 | 190 | 76.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18853425..18854267 | 1518..676 | 4215 | 100 | Minus |
2R | 25286936 | 2R | 18854844..18855109 | 267..2 | 1330 | 100 | Minus |
2R | 25286936 | 2R | 18854322..18854534 | 679..467 | 1065 | 100 | Minus |
2R | 25286936 | 2R | 18854587..18854789 | 468..266 | 1015 | 100 | Minus |
2R | 25286936 | 2R | 18861016..18861149 | 855..722 | 340 | 83.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18854624..18855466 | 1518..676 | 4215 | 100 | Minus |
2R | 25260384 | 2R | 18856043..18856308 | 267..2 | 1330 | 100 | Minus |
2R | 25260384 | 2R | 18855521..18855733 | 679..467 | 1065 | 100 | Minus |
2R | 25260384 | 2R | 18855786..18855988 | 468..266 | 1015 | 100 | Minus |
2R | 25260384 | 2R | 18862215..18862348 | 855..722 | 340 | 83.5 | Minus |
2R | 25260384 | 2R | 18857346..18857410 | 1223..1159 | 160 | 83 | Minus |
2R | 25260384 | 2R | 18862026..18862090 | 1041..977 | 160 | 83 | Minus |
2R | 25260384 | 2R | 18862543..18862591 | 589..541 | 140 | 85.7 | Minus |
2R | 25260384 | 2R | 18857541..18857595 | 1028..974 | 140 | 83.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14740562..14741392 | 679..1509 | 99 | <- | Minus |
chr2R | 14741451..14741661 | 468..678 | 100 | <- | Minus |
chr2R | 14741716..14741915 | 268..467 | 100 | <- | Minus |
chr2R | 14741972..14742237 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1425 | 58..1482 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1425 | 58..1482 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1425 | 58..1482 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1425 | 58..1482 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1425 | 58..1482 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1508 | 2..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1508 | 2..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1486 | 24..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1508 | 2..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Jheh1-RA | 1..1486 | 24..1509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18853434..18854264 | 679..1509 | 100 | <- | Minus |
2R | 18854323..18854533 | 468..678 | 100 | <- | Minus |
2R | 18854588..18854787 | 268..467 | 100 | <- | Minus |
2R | 18854844..18855109 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18853434..18854264 | 679..1509 | 100 | <- | Minus |
2R | 18854323..18854533 | 468..678 | 100 | <- | Minus |
2R | 18854588..18854787 | 268..467 | 100 | <- | Minus |
2R | 18854844..18855109 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18853434..18854264 | 679..1509 | 100 | <- | Minus |
2R | 18854323..18854533 | 468..678 | 100 | <- | Minus |
2R | 18854588..18854787 | 268..467 | 100 | <- | Minus |
2R | 18854844..18855109 | 1..267 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14741828..14742038 | 468..678 | 100 | <- | Minus |
arm_2R | 14742093..14742292 | 268..467 | 100 | <- | Minus |
arm_2R | 14742349..14742614 | 1..267 | 99 | Minus | |
arm_2R | 14740939..14741769 | 679..1509 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18854633..18855463 | 679..1509 | 100 | <- | Minus |
2R | 18855522..18855732 | 468..678 | 100 | <- | Minus |
2R | 18855787..18855986 | 268..467 | 100 | <- | Minus |
2R | 18856043..18856308 | 1..267 | 99 | Minus |
Translation from 57 to 1481
> RH03631.pep MGVTVKILVLILAIAGGLVYRNVTQLWADLPAPKLDPQEWWGDEAQPKDY EAYLKNNSEVIGNRLSYPDKTIADLKERLNRTLRLTPPLEGVAFEYGFNT NYLKEVVEYWRDDYLPRWREREVFLWQFNHFTTDIQGLRTHFLHLMVYDD NKVGKKHYPVLLLHGWPGSVREFYDFIHLLHQTNLDNNNKYIFNVVVPSL PGYGWSQGTSRKGLGPAQVAVMMRNLMLRLGYNKFFIQGGDWGSIIGSNI ATLYPENVLGYHSNMCNNLSPKSLAKGLVAEFWPSLFVPSGFEDFFFPKS NEMRYLMEESGYFHIQATKPDTIGAALTDNPVGLAAYILEKFSTWTNPSY RSLPDGGLTKRYKMDALLDNLMIYYLTNSITTSQRLYAEQYAQAQRDLHL DRVPTRVPTGCARFKSDIMQFLDVQLKDKYTNLVHSTYHKKGGHFAALEV PKVLYKDFIDFVETVERKFKIKTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13744-PA | 474 | GF13744-PA | 1..474 | 1..474 | 2304 | 88 | Plus |
Dana\GF13743-PA | 462 | GF13743-PA | 6..461 | 5..466 | 1272 | 53.1 | Plus |
Dana\GF13742-PA | 462 | GF13742-PA | 4..458 | 3..463 | 1257 | 52.8 | Plus |
Dana\GF13741-PA | 468 | GF13741-PA | 5..457 | 3..462 | 1225 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20936-PA | 474 | GG20936-PA | 1..474 | 1..474 | 2425 | 94.5 | Plus |
Dere\GG20934-PA | 463 | GG20934-PA | 4..458 | 3..463 | 1292 | 53.2 | Plus |
Dere\GG20933-PA | 468 | GG20933-PA | 6..460 | 7..465 | 1211 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19730-PA | 474 | GH19730-PA | 1..474 | 1..474 | 2139 | 80.4 | Plus |
Dgri\GH19729-PA | 462 | GH19729-PA | 9..458 | 5..463 | 1285 | 54.5 | Plus |
Dgri\GH19728-PA | 463 | GH19728-PA | 5..460 | 3..465 | 1207 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jheh1-PA | 474 | CG15101-PA | 1..474 | 1..474 | 2546 | 100 | Plus |
Jheh2-PD | 463 | CG15102-PD | 7..458 | 6..463 | 1286 | 54.7 | Plus |
Jheh2-PA | 463 | CG15102-PA | 7..458 | 6..463 | 1286 | 54.7 | Plus |
Jheh3-PA | 468 | CG15106-PA | 9..457 | 10..462 | 1221 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20154-PA | 474 | GI20154-PA | 1..474 | 1..474 | 2125 | 80.4 | Plus |
Dmoj\GI20153-PA | 464 | GI20153-PA | 7..458 | 3..463 | 1332 | 55.7 | Plus |
Dmoj\GI20152-PA | 465 | GI20152-PA | 5..460 | 3..465 | 1182 | 51.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10582-PA | 474 | GL10582-PA | 1..474 | 1..474 | 2203 | 84 | Plus |
Dper\GL10579-PA | 468 | GL10579-PA | 5..460 | 3..465 | 1204 | 51.7 | Plus |
Dper\GL10580-PA | 325 | GL10580-PA | 4..322 | 3..326 | 810 | 49.8 | Plus |
Dper\GL10581-PA | 117 | GL10581-PA | 2..116 | 352..466 | 338 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13492-PA | 474 | GA13492-PA | 1..474 | 1..474 | 2207 | 84 | Plus |
Dpse\GA13493-PA | 463 | GA13493-PA | 4..462 | 3..466 | 1304 | 54.4 | Plus |
Dpse\GA13496-PA | 468 | GA13496-PA | 6..460 | 7..465 | 1192 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\Jheh1-PA | 474 | GM19863-PA | 1..474 | 1..474 | 2482 | 97.3 | Plus |
Dsec\GM19862-PA | 463 | GM19862-PA | 6..458 | 5..463 | 1289 | 53.7 | Plus |
Dsec\Jheh3-PA | 468 | GM19861-PA | 6..460 | 7..465 | 1227 | 52.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Jheh1-PA | 474 | GD25350-PA | 1..474 | 1..474 | 2489 | 97.5 | Plus |
Dsim\GD25349-PA | 463 | GD25349-PA | 6..458 | 5..463 | 1293 | 54.1 | Plus |
Dsim\Jheh3-PA | 468 | GD25348-PA | 6..460 | 7..465 | 1223 | 52.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22431-PA | 474 | GJ22431-PA | 1..474 | 1..474 | 2140 | 80.2 | Plus |
Dvir\GJ22430-PA | 462 | GJ22430-PA | 9..458 | 5..463 | 1319 | 55.8 | Plus |
Dvir\GJ22429-PA | 466 | GJ22429-PA | 6..460 | 7..465 | 1183 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20693-PA | 474 | GK20693-PA | 1..474 | 1..474 | 2159 | 82.3 | Plus |
Dwil\GK20692-PA | 463 | GK20692-PA | 9..458 | 5..463 | 1280 | 53.2 | Plus |
Dwil\GK20691-PA | 467 | GK20691-PA | 6..460 | 7..465 | 1203 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13873-PA | 474 | GE13873-PA | 1..474 | 1..474 | 2458 | 95.4 | Plus |
Dyak\GE13872-PA | 463 | GE13872-PA | 6..458 | 5..463 | 1279 | 53.7 | Plus |
Dyak\GE13871-PA | 468 | GE13871-PA | 6..460 | 7..465 | 1209 | 51.8 | Plus |
Translation from 57 to 1481
> RH03631.hyp MGVTVKILVLILAIAGGLVYRNVTQLWADLPAPKLDPQEWWGDEAQPKDY EAYLKNNSEVIGNRLSYPDKTIADLKERLNRTLRLTPPLEGVAFEYGFNT NYLKEVVEYWRDDYLPRWREREVFLWQFNHFTTDIQGLRTHFLHLMVYDD NKVGKKHYPVLLLHGWPGSVREFYDFIHLLHQTNLDNNNKYIFNVVVPSL PGYGWSQGTSRKGLGPAQVAVMMRNLMLRLGYNKFFIQGGDWGSIIGSNI ATLYPENVLGYHSNMCNNLSPKSLAKGLVAEFWPSLFVPSGFEDFFFPKS NEMRYLMEESGYFHIQATKPDTIGAALTDNPVGLAAYILEKFSTWTNPSY RSLPDGGLTKRYKMDALLDNLMIYYLTNSITTSQRLYAEQYAQAQRDLHL DRVPTRVPTGCARFKSDIMQFLDVQLKDKYTNLVHSTYHKKGGHFAALEV PKVLYKDFIDFVETVERKFKIKTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Jheh1-PA | 474 | CG15101-PA | 1..474 | 1..474 | 2546 | 100 | Plus |
Jheh2-PD | 463 | CG15102-PD | 7..458 | 6..463 | 1286 | 54.7 | Plus |
Jheh2-PA | 463 | CG15102-PA | 7..458 | 6..463 | 1286 | 54.7 | Plus |
Jheh3-PA | 468 | CG15106-PA | 9..457 | 10..462 | 1221 | 53 | Plus |