BDGP Sequence Production Resources |
Search the DGRC for RH03863
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 38 |
Well: | 63 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17574-RA |
Protein status: | RH03863.pep: gold |
Preliminary Size: | 1911 |
Sequenced Size: | 1173 |
Gene | Date | Evidence |
---|---|---|
CG17574 | 2001-12-13 | Blastp of sequenced clone |
CG17574 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17574 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17574 | 2008-04-29 | Release 5.5 accounting |
CG17574 | 2008-08-15 | Release 5.9 accounting |
CG17574 | 2008-12-18 | 5.12 accounting |
1173 bp (1173 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070655
> RH03863.complete GGTCAGTGCTGCATAACGTGCACCCATTATCATCATGATAAATTGTATTA CTTTCAGATTAACGCTGATAAGATATAGTTAATTCCAATCGGGCTTCAAT AACGACCTTCCGGTAGAGTAGTTCACTGATATTTAAGTGAATTATACGGG TGCTGCCAAAAAGCGGATAAATCCGATAAATAGGCAGTGCATTCCCTGCA ACAAGTGGAATTTTCGACTTTAAATACAGATATTAACAAAGGGAAATAAC CGCTAAATCCTTGTCAAACTGGACGACTTTGAGTTGGACGATATAGACGA TTTCGCCATGGATTTCTGGGGCATTTTCATGTTCTTTCTGCTCACCTTCC TCATCATGAGTTGCTGCGGATATTGCTGCACCAGCAGACGCCAAGGTGCC GTTCTGTCCACGCCTGTGGTGGTGACCTCCGCCACCCACACGGCTCCCGG CGGATATCCGGTCACACAGCTGCCTCCGCCGGGCTATCCATCGAGCAATG CCTACGTAACTGCGACCTCGTACCCCGTACAGACCACCGGCAACGTGACT GTGCAGATGCCCATGCCGATGAGCCACCAGAACCAGCAGCAAATGCCAAT GCCTATGCCGATGCCGGGTCAGCAAACGCATGGCGTGGCGTATCCGACGT ATCCTGGCGCCGGGGCTGCCAACATGAATCCGCCGCCGTATGACATGTCC ATGGCTAATCCAGGACCTAGTGTTATGCCCGCTGGATATGAGAAGCAAGC TCCCTACAATCCCCACTTTGGCCAGTGAAATCGCACTGTGAACTGAGGAT CCCCTTTCCGTCTCGTTATAGCTTTTTTACTCAGCTGAACACTTTACTTT CCATGTTTTCTTGCATAAAAAACTCCAAACTCCTGGTAAAAAACCAAGTG AAAGCGATCGCACAACGAGCCATTTTTATATTCCATGTGATGTATGTAAA GTGTACATATAACTTAAGCGCAACCTTCTATTTATACATCTATATTAAGC AAATCCAAAACGAAAACCAAACTGAACTACATGAAGTGTTAATTGTAATA AACCAGTGAAGTGCACATCAAATGCAACTGAAGCACATTTGTTTCGATGT GCACTTTCACAAAATCACAAAAACAAGAAATGCAAACATGTTTTCAATTA CTTCTGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8736658..8737197 | 1157..618 | 2700 | 100 | Minus |
chr2R | 21145070 | chr2R | 8756451..8756718 | 269..2 | 1340 | 100 | Minus |
chr2R | 21145070 | chr2R | 8756244..8756384 | 410..270 | 705 | 100 | Minus |
chr2R | 21145070 | chr2R | 8737399..8737528 | 540..411 | 650 | 100 | Minus |
chr2R | 21145070 | chr2R | 8737261..8737339 | 618..540 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12849357..12849897 | 1158..618 | 2705 | 100 | Minus |
2R | 25286936 | 2R | 12869150..12869417 | 269..2 | 1340 | 100 | Minus |
2R | 25286936 | 2R | 12868943..12869083 | 410..270 | 705 | 100 | Minus |
2R | 25286936 | 2R | 12850099..12850228 | 540..411 | 650 | 100 | Minus |
2R | 25286936 | 2R | 12849961..12850039 | 618..540 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12850556..12851096 | 1158..618 | 2705 | 100 | Minus |
2R | 25260384 | 2R | 12870349..12870616 | 269..2 | 1340 | 100 | Minus |
2R | 25260384 | 2R | 12870142..12870282 | 410..270 | 705 | 100 | Minus |
2R | 25260384 | 2R | 12851298..12851427 | 540..411 | 650 | 100 | Minus |
2R | 25260384 | 2R | 12851160..12851238 | 618..540 | 395 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8736658..8737196 | 619..1157 | 100 | <- | Minus |
chr2R | 8737261..8737338 | 541..618 | 100 | <- | Minus |
chr2R | 8737399..8737528 | 411..540 | 100 | <- | Minus |
chr2R | 8756244..8756384 | 270..410 | 100 | <- | Minus |
chr2R | 8756451..8756718 | 1..269 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 1..471 | 308..778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 1..471 | 308..778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 1..471 | 308..778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 1..471 | 308..778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 1..471 | 308..778 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 6..1162 | 1..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 6..1162 | 1..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 6..1162 | 1..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 6..1162 | 1..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17574-RA | 6..1162 | 1..1157 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12849358..12849896 | 619..1157 | 100 | <- | Minus |
2R | 12849961..12850038 | 541..618 | 100 | <- | Minus |
2R | 12850099..12850228 | 411..540 | 100 | <- | Minus |
2R | 12868943..12869083 | 270..410 | 100 | <- | Minus |
2R | 12869150..12869417 | 1..269 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12849358..12849896 | 619..1157 | 100 | <- | Minus |
2R | 12849961..12850038 | 541..618 | 100 | <- | Minus |
2R | 12850099..12850228 | 411..540 | 100 | <- | Minus |
2R | 12868943..12869083 | 270..410 | 100 | <- | Minus |
2R | 12869150..12869417 | 1..269 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12849358..12849896 | 619..1157 | 100 | <- | Minus |
2R | 12849961..12850038 | 541..618 | 100 | <- | Minus |
2R | 12850099..12850228 | 411..540 | 100 | <- | Minus |
2R | 12868943..12869083 | 270..410 | 100 | <- | Minus |
2R | 12869150..12869417 | 1..269 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8756655..8756922 | 1..269 | 99 | Minus | |
arm_2R | 8736863..8737401 | 619..1157 | 100 | <- | Minus |
arm_2R | 8737466..8737543 | 541..618 | 100 | <- | Minus |
arm_2R | 8737604..8737733 | 411..540 | 100 | <- | Minus |
arm_2R | 8756448..8756588 | 270..410 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12850557..12851095 | 619..1157 | 100 | <- | Minus |
2R | 12851160..12851237 | 541..618 | 100 | <- | Minus |
2R | 12851298..12851427 | 411..540 | 100 | <- | Minus |
2R | 12870142..12870282 | 270..410 | 100 | <- | Minus |
2R | 12870349..12870616 | 1..269 | 99 | Minus |
Translation from 307 to 777
> RH03863.pep MDFWGIFMFFLLTFLIMSCCGYCCTSRRQGAVLSTPVVVTSATHTAPGGY PVTQLPPPGYPSSNAYVTATSYPVQTTGNVTVQMPMPMSHQNQQQMPMPM PMPGQQTHGVAYPTYPGAGAANMNPPPYDMSMANPGPSVMPAGYEKQAPY NPHFGQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12001-PA | 156 | GF12001-PA | 1..156 | 1..156 | 580 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22545-PA | 152 | GG22545-PA | 1..152 | 1..156 | 684 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20128-PA | 153 | GH20128-PA | 1..153 | 1..156 | 445 | 65 | Plus |
Dgri\GH23912-PA | 149 | GH23912-PA | 2..149 | 3..156 | 294 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17574-PA | 156 | CG17574-PA | 1..156 | 1..156 | 871 | 100 | Plus |
CG17574-PJ | 157 | CG17574-PJ | 1..157 | 1..156 | 859 | 99.4 | Plus |
CG17574-PI | 175 | CG17574-PI | 31..175 | 6..156 | 699 | 86.1 | Plus |
CG17574-PF | 162 | CG17574-PF | 7..162 | 3..156 | 688 | 82.2 | Plus |
CG17574-PE | 174 | CG17574-PE | 24..174 | 11..156 | 686 | 84.1 | Plus |
CG17574-PL | 157 | CG17574-PL | 14..157 | 10..156 | 685 | 85 | Plus |
CG17574-PG | 164 | CG17574-PG | 14..164 | 8..156 | 684 | 81.6 | Plus |
CG17574-PH | 174 | CG17574-PH | 52..174 | 34..156 | 680 | 99.2 | Plus |
CG17574-PK | 153 | CG17574-PK | 29..153 | 32..156 | 678 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20218-PA | 153 | GI20218-PA | 1..153 | 1..156 | 443 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17453-PA | 151 | GL17453-PA | 1..151 | 1..156 | 577 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14562-PA | 149 | GA14562-PA | 1..149 | 1..156 | 567 | 81.4 | Plus |
Dpse\GA14562-PB | 155 | GA14562-PB | 7..155 | 3..156 | 411 | 65 | Plus |
Dpse\GA14562-PC | 167 | GA14562-PC | 19..167 | 2..156 | 409 | 64.1 | Plus |
Dpse\GA14562-PD | 155 | GA14562-PD | 2..155 | 1..156 | 396 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20330-PA | 201 | GM20330-PA | 1..201 | 1..156 | 622 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25807-PA | 201 | GD25807-PA | 1..201 | 1..156 | 627 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20168-PA | 150 | GJ20168-PA | 1..150 | 1..156 | 509 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20881-PA | 142 | GK20881-PA | 1..142 | 1..156 | 449 | 67.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13415-PA | 154 | GE13415-PA | 1..154 | 1..156 | 611 | 90.4 | Plus |
Translation from 307 to 777
> RH03863.hyp MDFWGIFMFFLLTFLIMSCCGYCCTSRRQGAVLSTPVVVTSATHTAPGGY PVTQLPPPGYPSSNAYVTATSYPVQTTGNVTVQMPMPMSHQNQQQMPMPM PMPGQQTHGVAYPTYPGAGAANMNPPPYDMSMANPGPSVMPAGYEKQAPY NPHFGQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17574-PA | 156 | CG17574-PA | 1..156 | 1..156 | 871 | 100 | Plus |
CG17574-PJ | 157 | CG17574-PJ | 1..157 | 1..156 | 859 | 99.4 | Plus |
CG17574-PI | 175 | CG17574-PI | 31..175 | 6..156 | 699 | 86.1 | Plus |
CG17574-PF | 162 | CG17574-PF | 7..162 | 3..156 | 688 | 82.2 | Plus |
CG17574-PL | 157 | CG17574-PL | 14..157 | 10..156 | 685 | 85 | Plus |