BDGP Sequence Production Resources |
Search the DGRC for RH04535
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 45 |
Well: | 35 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11655-RA |
Protein status: | RH04535.pep: gold |
Sequenced Size: | 1722 |
Gene | Date | Evidence |
---|---|---|
CG11655 | 2001-12-13 | Blastp of sequenced clone |
CG11655 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11655 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11655 | 2008-04-29 | Release 5.5 accounting |
CG11655 | 2008-08-15 | Release 5.9 accounting |
CG11655 | 2008-12-18 | 5.12 accounting |
1722 bp (1722 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070661
> RH04535.complete GATTCCAGTTGGAGCACTTGTTGCGTGCGAAAACATTCCGGCTAACGGAT AACGGCTAACGAATTACATCACCTGAGTGGCGGCGAAATAATGTCTCCGC ACGGACGTCCTGGTTGGGAATGGAGCTACCTCCTGCTCACCCTGGCCGTG GGATTCGCATCCACCCACGGGTGGATGGCCCACTTTCGCCCAGCTGCGCT CACGTTGCAGATGGAGCGCGGGGATCGGGTGCAGCTCAAGCTGGAGAATG TGGCACCTTCCACGCTGCAGCAGCCGACGCGTTACCACTTCCGCCTGGAA AGTGTGGACACGGATTTGGCCAGTGTTCCAGGCGAGAATGCCACGATATC CCTGGATGTATTCAACACGGACACACGCGACTGGACGGGTGACATCGTAG TTAATGGCCATTTTCTGGGACAGACCAAGATCCAAGTGAAGCTGTACGAC AGCCAGCGAAACACCAGTGAACTGCCCACCAATTGGAGCAACGACAGCAC GCTGGACGTGAAGATCAAGCGACCGAAACGTGTGGTGGATGACATATTCC TGGGTACGATCATACTACTAATGTCGCTGCTGTACATCAGCTTTGGAGCC GCCCTAAATCTGGACGTGCTGAGGGGTCTGATCACCCGGCCAACCGGCCC GTGCATCGGATTTGTGATGCAGGTGGTGGGCATGCCTCTGCTCAGCTACG CCCTCGGCGTCTTCATCTTCCCCCAGGCGCCGGCCATGCAGCTGGGTCTC TTCTTCACCGGCATCTCGCCCAGCGGTGGGGCATCGAACACCTGGTCTGC CGTTCTCGGCGGTAATATACACCTCTCGGTGCTAATGACCACCGTTTCTA ATGTTGCTGCCTTCGCCACCATACCGCTGTGGACCATAACACTTGGCCAG CTGATCTTCGAGCGAGCGGGCATCAAGGTGCCTTACGGCAAAATCGCCTC GTACAGCAGCAGCCTGGTCCTTCCGCTCCTGCTCGGGCTGCTCGTCCAGA AGAGAATGCCTCAGGTCGCTAGGGTGCTGGTCCGCCTGCTCAAGCCCGTC TCCGCCTTCATCATCCTGTTCATCATCGTGTTCGCGATCATCAACAACTT TTACCTGTTCTATTTGTTCTCCTGGCAGATCGTCGTCGCTGGCATGGCTC TGCCTGGTCTGGGCTACATCTTCGCCTTCCTGGCAGCCAAGCTGCTGCAC CAAAATGCAGCCGACGCCCTGACCATCGCCATCGAGACGGGCATCCAGAA CACGGGCATCGCCATCTTCCTGCTGACGACCACGCTGGAATCGCCGGAGG CGGACATCACCACGGTGGTGCCCGTATCGGTGGCCGTGATGACGCCGCTG CCCCTGCTGGGCATTTATCTGTACAACCGGTGCTGGGGCAACAAGCGAAT TAGTGAGGCCAGCGCCACCGCCTCCGAAGCGGAGCGGATAGCTGGGGCGA TACATTAGCATTACCATGGCTATATAGCATGGCTATAGCACATAGTTTCT TTGTACATATTCGTTATTTTGATAACCTATACATCGTGCTAGCGCACGTA GACAAGGCTGAGATAGATGCTGGTTAAATTTGGGACCAAGGAATGCCGCA AATCTCAAGCGTATTATACTCCAGAATTTCACCTAACACCTAAGACGAAC CCAAACTTATTGGGATAATTATTTTTTTTACAATAAAATTAACCTATTAA TTTTGCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11655-RA | 1846 | CG11655-RA | 138..1844 | 2..1708 | 8535 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15343426..15344553 | 1..1128 | 99 | -> | Plus |
chrX | 15344915..15345449 | 1129..1663 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 1..1368 | 91..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 1..1368 | 91..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 1..1368 | 91..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 1..1368 | 91..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 1..1368 | 91..1458 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 2..1706 | 2..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 2..1706 | 2..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 15..1720 | 1..1706 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 2..1706 | 2..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11655-RA | 15..1720 | 1..1706 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15453485..15454612 | 1..1128 | 99 | -> | Plus |
X | 15454974..15455551 | 1129..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15453485..15454612 | 1..1128 | 99 | -> | Plus |
X | 15454974..15455551 | 1129..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15453485..15454612 | 1..1128 | 99 | -> | Plus |
X | 15454974..15455551 | 1129..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15347518..15348645 | 1..1128 | 99 | -> | Plus |
arm_X | 15349007..15349584 | 1129..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15461583..15462710 | 1..1128 | 99 | -> | Plus |
X | 15463072..15463649 | 1129..1706 | 100 | Plus |
Translation from 90 to 1457
> RH04535.pep MSPHGRPGWEWSYLLLTLAVGFASTHGWMAHFRPAALTLQMERGDRVQLK LENVAPSTLQQPTRYHFRLESVDTDLASVPGENATISLDVFNTDTRDWTG DIVVNGHFLGQTKIQVKLYDSQRNTSELPTNWSNDSTLDVKIKRPKRVVD DIFLGTIILLMSLLYISFGAALNLDVLRGLITRPTGPCIGFVMQVVGMPL LSYALGVFIFPQAPAMQLGLFFTGISPSGGASNTWSAVLGGNIHLSVLMT TVSNVAAFATIPLWTITLGQLIFERAGIKVPYGKIASYSSSLVLPLLLGL LVQKRMPQVARVLVRLLKPVSAFIILFIIVFAIINNFYLFYLFSWQIVVA GMALPGLGYIFAFLAAKLLHQNAADALTIAIETGIQNTGIAIFLLTTTLE SPEADITTVVPVSVAVMTPLPLLGIYLYNRCWGNKRISEASATASEAERI AGAIH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21239-PA | 439 | GF21239-PA | 4..438 | 15..450 | 1700 | 74.4 | Plus |
Dana\GF20799-PA | 454 | GF20799-PA | 5..432 | 11..440 | 497 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17879-PA | 455 | GG17879-PA | 1..455 | 1..455 | 2116 | 91.2 | Plus |
Dere\GG19318-PA | 453 | GG19318-PA | 24..439 | 21..442 | 477 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24476-PA | 444 | GH24476-PA | 23..443 | 26..450 | 1395 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11655-PA | 455 | CG11655-PA | 1..455 | 1..455 | 2316 | 100 | Plus |
CG9903-PA | 454 | CG9903-PA | 37..440 | 28..442 | 555 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15340-PA | 443 | GI15340-PA | 24..442 | 28..450 | 1448 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14581-PA | 423 | GL14581-PA | 2..422 | 27..450 | 1776 | 78.5 | Plus |
Dper\GL26933-PA | 151 | GL26933-PA | 1..150 | 298..450 | 601 | 78.4 | Plus |
Dper\GL12905-PA | 264 | GL12905-PA | 1..244 | 198..439 | 391 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11122-PA | 444 | GA11122-PA | 4..443 | 7..450 | 1787 | 76.4 | Plus |
Dpse\GA22711-PA | 451 | GA22711-PA | 30..431 | 28..439 | 530 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19565-PA | 455 | GM19565-PA | 1..455 | 1..455 | 2329 | 97.6 | Plus |
Dsec\GM13393-PA | 458 | GM13393-PA | 37..389 | 28..392 | 434 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17211-PA | 455 | GD17211-PA | 1..455 | 1..455 | 2340 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16857-PA | 442 | GJ16857-PA | 21..441 | 25..450 | 1485 | 67.2 | Plus |
Translation from 90 to 1457
> RH04535.hyp MSPHGRPGWEWSYLLLTLAVGFASTHGWMAHFRPAALTLQMERGDRVQLK LENVAPSTLQQPTRYHFRLESVDTDLASVPGENATISLDVFNTDTRDWTG DIVVNGHFLGQTKIQVKLYDSQRNTSELPTNWSNDSTLDVKIKRPKRVVD DIFLGTIILLMSLLYISFGAALNLDVLRGLITRPTGPCIGFVMQVVGMPL LSYALGVFIFPQAPAMQLGLFFTGISPSGGASNTWSAVLGGNIHLSVLMT TVSNVAAFATIPLWTITLGQLIFERAGIKVPYGKIASYSSSLVLPLLLGL LVQKRMPQVARVLVRLLKPVSAFIILFIIVFAIINNFYLFYLFSWQIVVA GMALPGLGYIFAFLAAKLLHQNAADALTIAIETGIQNTGIAIFLLTTTLE SPEADITTVVPVSVAVMTPLPLLGIYLYNRCWGNKRISEASATASEAERI AGAIH*