BDGP Sequence Production Resources |
Search the DGRC for RH05648
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 56 |
Well: | 48 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG6415-RA |
Protein status: | RH05648.pep: gold |
Sequenced Size: | 1263 |
Gene | Date | Evidence |
---|---|---|
CG6415 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6415 | 2008-04-29 | Release 5.5 accounting |
CG6415 | 2008-08-15 | Release 5.9 accounting |
CG6415 | 2008-12-18 | 5.12 accounting |
1263 bp (1263 high quality bases) assembled on 2004-12-16
GenBank Submission: BT021235
> RH05648.complete GAGTCACTGCGCGATGTTCAGACTAAGCTATCGACTGCCCGCTGCCCTCG GCGGTCTGCGCCACGCCTCCTCCGCCGCCGGCGAGGGTCAGCGCACCGCC CTCTACGATTTCCACGTGCAGAAAGGCGGAAAGATCGTGAACTTCGGAGG CTATGCTCTGCCGGTTCAGTATTCGGATCAGAGCATTATAGCCTCCCACC TGCACACCCGTCAGGTGGGCTCCATTTTCGACGTGTCGCACATGCTGCAA TCCCGGATTTTCGGCAAGGATGCGGCCGCCTGTCTGGAGTCGGTTTGCAC TGCGGACATTCTGGGCACGCCGGAGGGCAGTGGTAGCCTCACCGTCTTCA CCAACGAGGCGGGCGGTATCCTGGACGATCTCATCGTGAACAAAGTCAGC GAAAAGGAGCTATATGTGGTCTCCAATGCGGCGATGAAAGAACAGGACAT GGGCATAATGAAGACAGCTGTGGATAATTTTAAGTCCCAGGGAAAAGACG TATCCATTGAATTCCTCACACCCGCCGATCAATCTCTAGTAGCCGTCCAG GGTCCTCAAGTGGCCAAGGAACTATCGAAACTACTTACCGGGAAAGCTTC TCTCGATCAACTCTACTTCATGAGTTCCTTCGTCACCACATTGGCTGGAA TCCCCAATGTCAGGATCACGAGATGTGGTTACACCGGTGAGGACGGTGTG GAGATATCGGTGGCATCCAGCCAGGCACAGAAGCTCACTGAATCTCTTCT TGAGAGTGGAGTCCTCAAGCTTGCTGGTCTGGGAGCCAGAGACTCCCTGC GATTGGAGGCGGGTCTCTGCTTGTATGGCAGTGATATCGATTCTAAGACG ACACCCGTGGAGGCGGCTCTTGCCTGGTTGGTAACCAAAAGACGCCGCAC AACCCGCGATTTTCCAGGAGCTGACGTGATCCTTGGCCAGCTGAAGGAGG GCGTCAGCCGGAGGCGAGTGGGTCTCCAGATGTTGGGCACCAAGCCACCG CCAGCTCGTTCCGGAGTGGCCATCTTTAGTCAGGGTCAGCAGGTGGGTCA GGTGACTAGTGGCTGCCCAAGTCCCAGTGCTGGACGCAACATTGCTATGG GATATGTGGCAGAGAATCTAAAAGCACCCGGCACAAAGGTGGAGTTCAAG GTTCGAGACAAGCTCTACGAGGCTGAAGTCACTAAAATGCCATTTGTAAA AGCTAACTATTATAACAGACCAAAGAAATAAATGTGCAGCACACACTGAA AAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10702366..10702837 | 1..472 | 99 | -> | Plus |
chr2L | 10702894..10703669 | 473..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 1..1218 | 14..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 1..1218 | 14..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 1..1218 | 14..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 1..1218 | 14..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 1..1218 | 14..1231 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 2..1248 | 2..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 2..1248 | 2..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 2..1248 | 2..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 2..1248 | 2..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6415-RA | 2..1248 | 2..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10703621..10704092 | 1..472 | 99 | -> | Plus |
2L | 10704149..10704924 | 473..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10703621..10704092 | 1..472 | 99 | -> | Plus |
2L | 10704149..10704924 | 473..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10703621..10704092 | 1..472 | 99 | -> | Plus |
2L | 10704149..10704924 | 473..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10703621..10704092 | 1..472 | 99 | -> | Plus |
arm_2L | 10704149..10704924 | 473..1248 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10703621..10704092 | 1..472 | 99 | -> | Plus |
2L | 10704149..10704924 | 473..1248 | 100 | Plus |
Translation from 0 to 1230
> RH05648.hyp SHCAMFRLSYRLPAALGGLRHASSAAGEGQRTALYDFHVQKGGKIVNFGG YALPVQYSDQSIIASHLHTRQVGSIFDVSHMLQSRIFGKDAAACLESVCT ADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAAMKEQDM GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKAS LDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLL ESGVLKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRT TRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFSQGQQVGQ VTSGCPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVK ANYYNRPKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6415-PA | 405 | CG6415-PA | 1..405 | 5..409 | 2041 | 100 | Plus |
Sardh-PA | 894 | CG6385-PA | 532..839 | 67..370 | 189 | 24.8 | Plus |
CG3626-PA | 939 | CG3626-PA | 571..897 | 88..409 | 156 | 24 | Plus |
Translation from 1 to 1230
> RH05648.pep SHCAMFRLSYRLPAALGGLRHASSAAGEGQRTALYDFHVQKGGKIVNFGG YALPVQYSDQSIIASHLHTRQVGSIFDVSHMLQSRIFGKDAAACLESVCT ADILGTPEGSGSLTVFTNEAGGILDDLIVNKVSEKELYVVSNAAMKEQDM GIMKTAVDNFKSQGKDVSIEFLTPADQSLVAVQGPQVAKELSKLLTGKAS LDQLYFMSSFVTTLAGIPNVRITRCGYTGEDGVEISVASSQAQKLTESLL ESGVLKLAGLGARDSLRLEAGLCLYGSDIDSKTTPVEAALAWLVTKRRRT TRDFPGADVILGQLKEGVSRRRVGLQMLGTKPPPARSGVAIFSQGQQVGQ VTSGCPSPSAGRNIAMGYVAENLKAPGTKVEFKVRDKLYEAEVTKMPFVK ANYYNRPKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15818-PA | 405 | GF15818-PA | 1..405 | 5..409 | 1889 | 86.2 | Plus |
Dana\GF19457-PA | 934 | GF19457-PA | 568..894 | 88..409 | 161 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23666-PA | 405 | GG23666-PA | 1..405 | 5..409 | 2036 | 93.8 | Plus |
Dere\GG18704-PA | 938 | GG18704-PA | 570..896 | 88..409 | 167 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10422-PA | 415 | GH10422-PA | 2..415 | 5..409 | 1622 | 76.1 | Plus |
Dgri\GH12074-PA | 932 | GH12074-PA | 573..899 | 88..409 | 166 | 23.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6415-PA | 405 | CG6415-PA | 1..405 | 5..409 | 2041 | 100 | Plus |
Sardh-PA | 894 | CG6385-PA | 532..839 | 67..370 | 189 | 24.8 | Plus |
CG3626-PA | 939 | CG3626-PA | 571..897 | 88..409 | 156 | 24 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23443-PA | 410 | GI23443-PA | 1..410 | 5..409 | 1665 | 77.9 | Plus |
Dmoj\GI21784-PA | 935 | GI21784-PA | 576..902 | 88..409 | 163 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26626-PA | 410 | GL26626-PA | 1..409 | 5..408 | 1796 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19575-PA | 410 | GA19575-PA | 1..409 | 5..408 | 1786 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18702-PA | 405 | GM18702-PA | 1..405 | 5..409 | 2091 | 96.8 | Plus |
Dsec\GM12342-PA | 905 | GM12342-PA | 570..804 | 88..325 | 164 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23726-PA | 405 | GD23726-PA | 1..405 | 5..409 | 2076 | 96.5 | Plus |
Dsim\GD25443-PA | 894 | GD25443-PA | 532..839 | 67..370 | 181 | 24.8 | Plus |
Dsim\GD16688-PA | 938 | GD16688-PA | 570..896 | 88..409 | 166 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23941-PA | 414 | GJ23941-PA | 1..414 | 5..409 | 1681 | 77.8 | Plus |