BDGP Sequence Production Resources |
Search the DGRC for RH05737
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 57 |
Well: | 37 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12207-RA |
Protein status: | RH05737.pep: gold |
Preliminary Size: | 1353 |
Sequenced Size: | 2163 |
Gene | Date | Evidence |
---|---|---|
CG12207 | 2003-02-13 | Blastp of sequenced clone |
CG12207 | 2008-04-29 | Release 5.5 accounting |
CG12207 | 2008-08-15 | Release 5.9 accounting |
CG12207 | 2008-12-18 | 5.12 accounting |
2163 bp (2163 high quality bases) assembled on 2003-02-13
GenBank Submission: BT003753
> RH05737.complete GATCTGGTAACATTGCAGCACGTAGTAAACAGAAAATCACAATTGGATCG AAAAATCGCAAATTGCCATAAAACAGAGCACTCGCGTGTGCAAATATTAG CGCAATTCGTTGGCAGGCTGAGCAGTGGGCGGTAGAGACGCCAACCCACC CGCTCCCACTCTCTCCGTCGCGCCGTTTCGCTCGCTCTGTTTTGAAAGGC CTGCCATGGGTGTGTGCGTGCGTGTGTGAGTTTGGGGCTCTGCGGCGGAG TAACTGTAACAGTTGCAGCTGCAGTTGCAGTTACCGTTGCAAAGGAGCGG CGTTCGGTTTCAAGAGATCGTCCCCGACATGGATGACTCGGAATTCATGT TCAACGAGAAGCAATCGATCCGGGACTCCGGGCGCACCCTCAAGCGCTAC GGGAGCACCTGCTGCAACAGCCTCCGGAACAATGAGACCCTCATCCGGCA CATCGTCGAGAAGACGGACACGCTGCAGGGCATCGCCCTCAAGTACGGCT GCACGACGGAGCAAATAAGACGGGCCAACCGCCTCTTCGCCTCGGACAGC CTGTTCCTGCGTCAGTTTCTCCTCGTTCCAGTGGAGAAGAACTCACCGTA CTATCCCCAGGTGCCTGGCGATTCGATAGCCGCTTTCGACGCCGTGCTGG CCACGCCACCGGGCACTCCGGATGCCAATGGACAGCGGGAGGCGCACAAC AATGCCAATAATCTGAGCCAGAGCAACAAGAGCTTCATGAAGAGCAACGA CATCAGCAGCAGCAGTAGCAGCAGCAGCAGTGGGAGCAGCAGCAGCTGCA ACACAAGTGGCACCGGCCCCATTTCCGGAGGATCGCGTTCCGGCGGCAAC CAACAGCAGCAGCAGCAACAGCCCCCACAACGTCCCTACTCCATTGCCGG GGAGCTGCTGGTGGTGCAGGCCGGCGACGAGGATCCATCGATGATGCACG GCCACGGTGGTTGCAGCGGCAAGCAGAGCAAGAGCCTGGACTCGGTGGCC GCAATGACGCCCGAGGAGGAGAACAGGAAATGCATGAACGACTTCCTTAA CAAGATAGACAACACCATTTCTGAGTCGCGCAAATATGTGGAGCGCTCTA AGGACCTGGTCAGCAGTCAGAGTGATGCGGACATCTGCATCAGTGCCACC GCCGACGTTTTCCCGCAGCGCCGCCATCCGCTGAACAACTCCTACAAGAC CAACAACAACGACCGTCCGTCACAGTATCAGCGCCACAGCTCGACGGGCA GCGGGAACTCCTCGGATACGGCGCACCTGCTGAACACGACGCAGACGCGA CGAGTCCAGAATTCGCTGAAGCGGCTGGAGAAGCAGCAGGACGACTTCTT TGAGTTGTAGCGTCCGTCTGCGGGACGCAATCTAGCCTAATTACGCAGAG AGTTAATTTTACAATTCGTTTTTAATTGCCGCGCATTGGGGAGATGACTT TGGTCAGCATGTTACATCACACGGAAATGCCGCACTCTAAATGTAATATA AATAATGATATCTATCGACAAATATGCGCGATACCTTACCTATACGATAA AACATTAATGTAACTGAGCTAAAACCTAAACTAAACTATATACCTAAACT AAGCGCTGCGCTATGTAAACCTGTAGTACGATGACAAGGCAGTTCTGTAA ACCCATTTTGATCTTGTGTCAGCCCTGTATAATTGCCGCCAATTTGCTTG CAAGATCCGATCTGAACCGCATCGAACAGATACGGAAGCCTTCTGTCCTC CTGTCCGCCATCCTGCCCCCCATTATGTTTACTTTTTGTATGACTCTAGC TTTAATCACACTGTGTATAATTTAGTTATGAGAATTATTAATGTTAATTG TATATAGTCGCCAGAAAACACAACAATCCAACTGGACTGCTCTGACCGCT AAAACACGAAATTGGCCAACTGTTGACGTGTAATTTTAATTTATTTTTTA GCTTTCCAAAGTATTAAACCCGAAACGTTCTATATAAAACCGTAACCTCA ATTGTTAAACAAGCATCCACCACAAAACAATATATACACCAATATATATT ATGTATATCCCAGAAACCTCAATATCGAACTGCACTCATATCGAGCCAAG TCATGTTGTACGTGAGAATGTTTTTTAAAATAAAGTGAGAATTGTGTTGG AACAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12207-RA | 2241 | CG12207-RA | 38..2192 | 2..2156 | 10745 | 99.9 | Plus |
CG12207-RB | 2379 | CG12207-RB | 481..2330 | 307..2156 | 9220 | 99.8 | Plus |
CG12207.b | 2003 | CG12207.b | 160..2003 | 307..2150 | 9190 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10126053..10127101 | 1105..2153 | 5215 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 10125244..10125843 | 505..1104 | 2970 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 10123068..10123373 | 2..307 | 1455 | 98.4 | Plus |
chr3R | 27901430 | chr3R | 10123615..10123813 | 307..505 | 980 | 99.5 | Plus |
chrX | 22417052 | chrX | 22124796..22124917 | 243..122 | 370 | 86.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14301228..14302279 | 1105..2156 | 5230 | 99.8 | Plus |
3R | 32079331 | 3R | 14300419..14301018 | 505..1104 | 3000 | 100 | Plus |
3R | 32079331 | 3R | 14298242..14298547 | 2..307 | 1530 | 100 | Plus |
3R | 32079331 | 3R | 14298789..14298987 | 307..505 | 995 | 100 | Plus |
X | 23542271 | X | 22728790..22728911 | 243..122 | 385 | 87.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14042059..14043110 | 1105..2156 | 5230 | 99.8 | Plus |
3R | 31820162 | 3R | 14041250..14041849 | 505..1104 | 3000 | 100 | Plus |
3R | 31820162 | 3R | 14039073..14039378 | 2..307 | 1530 | 100 | Plus |
3R | 31820162 | 3R | 14039620..14039818 | 307..505 | 995 | 100 | Plus |
X | 23527363 | X | 22713882..22714003 | 243..122 | 385 | 87.7 | Minus |
X | 23527363 | X | 22712982..22713025 | 280..237 | 175 | 93.1 | Minus |
X | 23527363 | X | 22714015..22714056 | 127..86 | 165 | 92.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 716..881 | 319 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6694..6925 | 650..874 | 306 | 64.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 718..881 | 275 | 66.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2324..2526 | 682..881 | 259 | 62.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2478 | 723..884 | 228 | 63.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6729..6863 | 743..872 | 220 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 696..863 | 220 | 61.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 738..893 | 216 | 63.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 785..884 | 165 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 766..881 | 161 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 731..881 | 149 | 58.2 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 715..881 | 146 | 58.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 682..884 | 138 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 786..881 | 130 | 64.6 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1605..1647 | 1853..1811 | 125 | 76.7 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 9487..9529 | 1853..1811 | 125 | 76.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 841..881 | 120 | 79.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 841..881 | 120 | 79.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1169 | 767..884 | 117 | 60.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2842 | 795..888 | 115 | 59.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10123067..10123373 | 1..307 | 98 | -> | Plus |
chr3R | 10123616..10123813 | 308..505 | 99 | -> | Plus |
chr3R | 10125245..10125481 | 506..742 | 99 | == | Plus |
chr3R | 10125543..10125843 | 804..1104 | 99 | -> | Plus |
chr3R | 10126053..10127101 | 1105..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RC | 39..1101 | 300..1360 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RC | 39..1101 | 300..1360 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RB | 39..1101 | 300..1360 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RC | 39..1101 | 300..1360 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RC | 39..1101 | 300..1360 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RA | 2..2150 | 2..2150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RA | 2..2150 | 2..2150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RA | 2..2153 | 2..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RA | 2..2150 | 2..2150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12207-RA | 17..2169 | 1..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14298241..14298547 | 1..307 | 99 | -> | Plus |
3R | 14298790..14298987 | 308..505 | 100 | -> | Plus |
3R | 14300420..14301018 | 506..1104 | 100 | -> | Plus |
3R | 14301228..14302276 | 1105..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14298241..14298547 | 1..307 | 99 | -> | Plus |
3R | 14298790..14298987 | 308..505 | 100 | -> | Plus |
3R | 14300420..14301018 | 506..1104 | 100 | -> | Plus |
3R | 14301228..14302276 | 1105..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14298241..14298547 | 1..307 | 99 | -> | Plus |
3R | 14298790..14298987 | 308..505 | 100 | -> | Plus |
3R | 14300420..14301018 | 506..1104 | 100 | -> | Plus |
3R | 14301228..14302276 | 1105..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10123963..10124269 | 1..307 | 99 | -> | Plus |
arm_3R | 10124512..10124709 | 308..505 | 100 | -> | Plus |
arm_3R | 10126142..10126740 | 506..1104 | 100 | -> | Plus |
arm_3R | 10126950..10127998 | 1105..2153 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14039072..14039378 | 1..307 | 99 | -> | Plus |
3R | 14039621..14039818 | 308..505 | 100 | -> | Plus |
3R | 14041251..14041849 | 506..1104 | 100 | -> | Plus |
3R | 14042059..14043107 | 1105..2153 | 99 | Plus |
Translation from 328 to 1359
> RH05737.pep MDDSEFMFNEKQSIRDSGRTLKRYGSTCCNSLRNNETLIRHIVEKTDTLQ GIALKYGCTTEQIRRANRLFASDSLFLRQFLLVPVEKNSPYYPQVPGDSI AAFDAVLATPPGTPDANGQREAHNNANNLSQSNKSFMKSNDISSSSSSSS SGSSSSCNTSGTGPISGGSRSGGNQQQQQQQPPQRPYSIAGELLVVQAGD EDPSMMHGHGGCSGKQSKSLDSVAAMTPEEENRKCMNDFLNKIDNTISES RKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDRPSQY QRHSSTGSGNSSDTAHLLNTTQTRRVQNSLKRLEKQQDDFFEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16161-PA | 362 | GF16161-PA | 24..362 | 1..343 | 1393 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16845-PA | 366 | GG16845-PA | 24..366 | 1..343 | 1796 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18663-PA | 365 | GH18663-PA | 24..365 | 1..343 | 1151 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
red-PG | 366 | CG12207-PG | 24..366 | 1..343 | 1777 | 100 | Plus |
red-PF | 366 | CG12207-PF | 24..366 | 1..343 | 1777 | 100 | Plus |
red-PE | 343 | CG12207-PE | 1..343 | 1..343 | 1777 | 100 | Plus |
red-PD | 343 | CG12207-PD | 1..343 | 1..343 | 1777 | 100 | Plus |
red-PA | 343 | CG12207-PA | 1..343 | 1..343 | 1777 | 100 | Plus |
red-PC | 366 | CG12207-PC | 24..366 | 1..343 | 1777 | 100 | Plus |
red-PB | 366 | CG12207-PB | 24..366 | 1..343 | 1777 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10811-PA | 355 | GI10811-PA | 24..355 | 1..343 | 1129 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23268-PA | 360 | GL23268-PA | 24..360 | 1..343 | 1353 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11477-PA | 360 | GA11477-PA | 24..360 | 1..343 | 1353 | 82 | Plus |
Dpse\GA23177-PA | 164 | GA23177-PA | 27..163 | 196..334 | 639 | 89.2 | Plus |
Dpse\GA23176-PA | 141 | GA23176-PA | 1..129 | 1..129 | 632 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24156-PA | 366 | GM24156-PA | 24..366 | 1..343 | 1802 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18952-PA | 856 | GD18952-PA | 24..349 | 1..326 | 1754 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14410-PA | 343 | GJ14410-PA | 24..343 | 1..343 | 1137 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11342-PA | 367 | GK11342-PA | 24..367 | 1..343 | 1171 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24226-PA | 370 | GE24226-PA | 24..370 | 1..343 | 1795 | 98 | Plus |
Translation from 328 to 1359
> RH05737.hyp MDDSEFMFNEKQSIRDSGRTLKRYGSTCCNSLRNNETLIRHIVEKTDTLQ GIALKYGCTTEQIRRANRLFASDSLFLRQFLLVPVEKNSPYYPQVPGDSI AAFDAVLATPPGTPDANGQREAHNNANNLSQSNKSFMKSNDISSSSSSSS SGSSSSCNTSGTGPISGGSRSGGNQQQQQQQPPQRPYSIAGELLVVQAGD EDPSMMHGHGGCSGKQSKSLDSVAAMTPEEENRKCMNDFLNKIDNTISES RKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDRPSQY QRHSSTGSGNSSDTAHLLNTTQTRRVQNSLKRLEKQQDDFFEL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12207-PE | 343 | CG12207-PE | 1..343 | 1..343 | 1777 | 100 | Plus |
CG12207-PD | 343 | CG12207-PD | 1..343 | 1..343 | 1777 | 100 | Plus |
CG12207-PA | 343 | CG12207-PA | 1..343 | 1..343 | 1777 | 100 | Plus |
CG12207-PG | 366 | CG12207-PG | 24..366 | 1..343 | 1777 | 100 | Plus |
CG12207-PF | 366 | CG12207-PF | 24..366 | 1..343 | 1777 | 100 | Plus |