BDGP Sequence Production Resources |
Search the DGRC for RH07028
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 70 |
Well: | 28 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG30033-RB |
Protein status: | RH07028.pep: gold |
Sequenced Size: | 991 |
Gene | Date | Evidence |
---|---|---|
CG30033 | 2001-12-13 | Blastp of sequenced clone |
CG7741 | 2002-01-01 | Sim4 clustering to Release 2 |
CG30033 | 2003-01-01 | Sim4 clustering to Release 3 |
CG30033 | 2008-04-29 | Release 5.5 accounting |
CG30033 | 2008-08-15 | Release 5.9 accounting |
CG30033 | 2008-12-18 | 5.12 accounting |
991 bp (991 high quality bases) assembled on 2001-12-13
GenBank Submission: AY070670
> RH07028.complete GACAGTTTGTATTCCAAGATGCAGGTGCTAGGCGGCAATCCACTCAGCTT GTGTCTCTTGGTGATCATCACTCCGTCACTGATTGCAGCCAATCCCCTGT GGAGTCTTGACCAGGTGGGAGCATACTTCACTGGCATCTTCCGCTCCGTA GTGGGTCCAATATTTGGCTTTGGCCTGGCAGCCAACAGCACCGCCTTATA AAGATTGTTCTGCTTACCGCACCAGTCCGAAGGGAACCGGCAGCTTCTCG ACCACATCCACCACGCAATTGTCCAGCTGCTTGAGGATCAATTGGGCGGC ATAGAAGCCGGCGGGTCCGGCGCCTACGATGCATATCCGCTTGGTGGGCG TGGTGCTCTGGATCACCTGCAATCGGGCGGAACTCGTGTGGAGGCCACGT CTGAAGATGTTAAGGCAATTGATGCCCATCGTGGATCAGTCGCCGATCTC TGCTACTGGGAAAGCAGCTCGTTTTCGTATCTTACAGATAATCAGTCGGT TTGCTAGGTGATCTTCTCAAAAAAGTTTTTTGCTAACGATGATTTCTTAT TTACTCGTTATCTCTCGAAAGACTTTCGCCAGCAGTCCCCAAAATACCCA ACGGAATCCAAACAAAACAGAGTATTTGCTCTCATTGCGTTATGGTAACA CTACGTGATTTCGGTTTAATTTAATTTTTCTGAGATGAAAATTCCTATGA AAAATCTAAAAATATATGACCCCAAGCACCGACAGTACATTAGTAATAGA AAGCTAGGAAAGTAAGGATGTTTTAATATTGTTATACAGACAGTTGCAGC GGAGCAAGAATTTAAATTGCGCGCCTTTTTGATACTTGATACTCTCATAA GGCGTTTAAATATACATATCACTCCTTTCATTTCTAAAAATATTGAAAAT TAACAAGAAGTATTTATTATTATAAAAAAATATTGAAGCATTTACAGAAA TGTTGTAATAAATGTACTAAAAGCCAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7180143..7181004 | 122..975 | 98 | Plus | |
chr2R | 7179963..7180083 | 1..121 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..183 | 19..201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RC | 1..183 | 19..201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..183 | 19..201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..183 | 19..201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..183 | 19..201 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 3..977 | 1..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..974 | 2..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..974 | 2..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 3..977 | 1..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG30033-RB | 1..974 | 2..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11292530..11292650 | 1..121 | 99 | -> | Plus |
2R | 11292710..11293563 | 122..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11292530..11292650 | 1..121 | 99 | -> | Plus |
2R | 11292710..11293563 | 122..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11292530..11292650 | 1..121 | 99 | -> | Plus |
2R | 11292710..11293563 | 122..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7180035..7180155 | 1..121 | 99 | -> | Plus |
arm_2R | 7180215..7181068 | 122..975 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11293909..11294762 | 122..975 | 99 | Plus | |
2R | 11293729..11293849 | 1..121 | 99 | -> | Plus |
Translation from 0 to 200
> RH07028.hyp HSLYSKMQVLGGNPLSLCLLVIITPSLIAANPLWSLDQVGAYFTGIFRSV VGPIFGFGLAANSTAL*
Translation from 18 to 200
> RH07028.pep MQVLGGNPLSLCLLVIITPSLIAANPLWSLDQVGAYFTGIFRSVVGPIFG FGLAANSTAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19802-PA | 60 | GF19802-PA | 1..59 | 1..59 | 172 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20187-PA | 60 | GG20187-PA | 1..60 | 1..60 | 275 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19951-PA | 63 | GH19951-PA | 15..60 | 11..58 | 136 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG30033-PC | 60 | CG30033-PC | 1..60 | 1..60 | 304 | 100 | Plus |
CG30033-PB | 60 | CG30033-PB | 1..60 | 1..60 | 304 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19908-PA | 63 | GI19908-PA | 16..57 | 11..57 | 127 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17725-PA | 62 | GL17725-PA | 1..52 | 1..52 | 140 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24891-PA | 62 | GA24891-PA | 1..52 | 1..52 | 140 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21275-PA | 60 | GM21275-PA | 1..60 | 1..60 | 285 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10787-PA | 60 | GD10787-PA | 1..60 | 1..60 | 285 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15076-PA | 62 | GJ15076-PA | 8..51 | 9..52 | 138 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12875-PA | 60 | GE12875-PA | 1..60 | 1..60 | 247 | 85 | Plus |