Clone RH07111 Report

Search the DGRC for RH07111

Clone and Library Details

Library:RH
Tissue Source:Drosophila melanogaster adult head
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2001-04-30
Comments:Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:71
Well:11
Vector:pFlc-1
Associated Gene/TranscriptCG30002-RA
Protein status:RH07111.pep: wuzgold
Sequenced Size:1645

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30002 2002-11-06 Blastp of sequenced clone
CG30002 2003-01-01 Sim4 clustering to Release 3
CG30002 2008-04-29 Release 5.5 accounting
CG30002 2008-08-15 Release 5.9 accounting
CG30002 2008-12-18 5.12 accounting

Clone Sequence Records

RH07111.complete Sequence

1645 bp (1645 high quality bases) assembled on 2002-11-06

GenBank Submission: BT001761

> RH07111.complete
GAGTTTTCCATCTGAGCTCGGATCATGAACAGTCCTCTTGCGATCACTGC
CCTAGTTTGGGGCATTCTCTGCCTTACGTGTCCACCTTTATCTGAAGCCG
GAATGGAAGATTGGACACCAGGCCAGCGCCTGGTCTACGAGAACCTGACA
CAACAGGATTGCGGTGTCCGATCGAATCAGATTCCCGCCGTAAGGATTCG
TTTTATGATCACCGGCGGCAGAAAATCGTCGCTAATGTCTCAGCCTTGGA
TGGCGTTTCTTCATATCGCAAGTGACTTAGAGATGTGCCGCTGTGGAGGC
TCTCTTATCTCAGAACGTATTTATGCCAAAATCACTTCCCCCAGTTCAAA
CTACTCATTTTGCTTGATTTAGTCTTTGTTTTGACTGCCGCGCACTGCTT
CAAAATGTGTCCCCGATCTAAGGAGATTAGAGTGTGGCTGGGAGAGCTCG
ACCTTAGTTCCACAAGTGACTGCACCACCTACAATTATGAACGGGTTTGC
GCTCCGCCCGTGGAGGAGTTTACCATCGACAAGTGGATTCTTCACGAGGA
GTTTAACCTCTTTTATCCCGGGTATGATATTGCCCTGATAAAACTAAACA
AGAAAGTGGTCTTTAAAGATCACATACGACCCATATGCCTGCCCCTGACC
GACGAACTCTTGGCGTTTACCTTGCAGCTGGGACAACGCTTCATGGCGGT
GGGCTGGGGAAAAACGGAGAGTCTACGCTATGCCAACAGTACAATGGAGG
TGGATATAAGAACTGAGAAGTGCACCGACGGCAGGGATACTTCGTTCCTC
TGCGCCAGTGGAGATTATGTGGACACATGCAATGGGGACTCCGGTGGACC
GCTCTTATGGAAGACCACGTTGTTTGGCAAGGATCGAGCCGTACAATTTG
GTGTGGTCAGCACTGGAAGCCAAAACTGCGGTGCTGGTCACAAGGCCTAC
TACATGGATGTACCCACCTATATGCCCTGGATACTTGAAAAGATGGCAGA
ATTCTCGGATGTTTAAGTAAACTCTGTTAACTAAAGATGCGAATACGCAT
GCGCGTTTCACTGGTGTTGATAATTTTCGATTCTTTTTGGTCACCCGAAG
GCCTTAACTTCTATAAGCTTAGTTATAAAGATGTCAGATCTAGTAGCTCA
CGTTTTTGTGTTGTTCAGATCGGTAGTCGCATCAAGAAATATGTATAGCG
AAATACGAAATCGGAAAAGTCACATTAGGCACAGTTGTATTGCAAGAATT
TTAAAACCAATTACACAATATGAGTAATTAGATTGGTGTCCTGTATCTGG
GACACTCGGACTCGGTGGTGGAGTAAACTTTTAAAAGGGACTGCAGTAAT
GGGTACTTTCGTCTCTGAAATCTTAATTGCTTAATCTCAACTTTCTAGCA
TTTATTGTTCCAAAGATTACCATGTACATCGGACAGACGGACGGACAACG
AACGGTCATGACCAGAGCGTCTCGGCTATTGATCCGCATCAATAATATAT
ATACTTTATATAGTCGGAAACGCATCCTTCTATGAGAAACATGAGTTTCA
ACGAATCTTATATACTCTTTTACTCTACGCTTAACGGTTATAAAAAAATA
AAAAATCTTGAGTTTTGATGATATTGTACAAAAAAAAAAAAAAAA

RH07111.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:35:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG30002-RA 1629 CG30002-RA 2..1629 2..1629 8140 100 Plus
CG30002-RB 1624 CG30002-RB 368..1624 373..1629 6285 100 Plus
CG1773-RA 1106 CG1773-RA 301..945 373..1017 2565 93.1 Plus
CG30002-RB 1624 CG30002-RB 53..367 2..316 1575 100 Plus
CG1773-RA 1106 CG1773-RA 1..184 17..200 545 86.4 Plus
CG1773-RA 1106 CG1773-RA 191..300 207..316 325 86.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5592597..5593609 617..1629 5065 100 Plus
chr2R 21145070 chr2R 5591846..5592269 2..425 2120 100 Plus
chr2R 21145070 chr2R 5594481..5594881 617..1017 1480 91.3 Plus
chr2R 21145070 chr2R 5593731..5594154 2..425 1340 87.7 Plus
chr2R 21145070 chr2R 5592333..5592526 425..618 970 100 Plus
chr2R 21145070 chr2R 5594217..5594410 425..618 850 95.9 Plus
chr3R 27901430 chr3R 27886696..27886840 1452..1596 365 83.4 Plus
chr2R 21145070 chr2R 21059046..21059198 1452..1604 345 81.7 Plus
chr3L 24539361 chr3L 23024358..23024492 1462..1596 345 83.7 Plus
chr2RHet 3288813 chr2RHet 1412783..1412908 1596..1471 345 84.9 Minus
chr2RHet 3288813 chr2RHet 990797..990940 1452..1595 330 81.9 Plus
chr2R 21145070 chr2R 8025764..8025888 1471..1596 325 85.7 Plus
chrX 22417052 chrX 22320137..22320281 1452..1596 320 81.4 Plus
chr2L 23010047 chr2L 22066577..22066718 1452..1593 320 81.7 Plus
chr2RHet 3288813 chr2RHet 989752..989889 1595..1458 315 81.9 Minus
chr2RHet 3288813 chr2RHet 1256272..1256415 1452..1595 315 81.2 Plus
chrXHet 204175 chrXHet 8286..8420 1452..1586 315 82.2 Plus
chr3RHet 2517486 chr3RHet 1893896..1894036 1452..1592 315 81.6 Plus
chr3L 24539361 chr3L 6307621..6307748 1579..1452 310 82.8 Minus
chrX 22417052 chrX 22245673..22245812 1457..1596 310 81.4 Plus
chr3R 27901430 chr3R 2866027..2866161 1596..1462 300 81.5 Minus
chrX 22417052 chrX 22300150..22300299 1447..1596 300 80 Plus
chr3RHet 2517486 chr3RHet 1129837..1129982 1452..1597 295 80.1 Plus
chr4 1351717 chr4 536608..536737 1464..1593 290 81.5 Plus
chr2R 21145070 chr2R 1332856..1332978 1471..1593 285 82.1 Plus
chrX 22417052 chrX 20867575..20867721 1603..1457 285 79.6 Minus
chr4 1351717 chr4 1123247..1123387 1452..1593 285 81.7 Plus
chr3LHet 2555433 chr3LHet 826003..826119 1588..1472 285 82.9 Minus
chr3R 27901430 chr3R 1377882..1377961 1452..1531 280 90 Plus
chr3R 27901430 chr3R 27891510..27891643 1586..1453 280 80.6 Minus
chrX 22417052 chrX 18509111..18509247 1457..1593 280 80.3 Plus
chrX 22417052 chrX 19761599..19761678 1452..1531 280 90 Plus
chr4 1351717 chr4 1148129..1148274 1596..1451 280 79.5 Minus
chr2R 21145070 chr2R 1620833..1620977 1596..1452 275 79.3 Minus
chr2R 21145070 chr2R 2085587..2085728 1452..1593 275 79.6 Plus
chr3R 27901430 chr3R 2907586..2907727 1593..1452 275 79.6 Minus
chrX 22417052 chrX 15445036..15445180 1452..1596 275 79.3 Plus
chrX 22417052 chrX 21081514..21081659 1452..1596 275 80.8 Plus
chr2L 23010047 chr2L 21266074..21266212 1596..1458 275 79.9 Minus
chrXHet 204175 chrXHet 22527..22638 1468..1579 275 83 Plus
chr3RHet 2517486 chr3RHet 1784572..1784713 1452..1593 275 79.6 Plus
chr2R 21145070 chr2R 581480..581623 1452..1596 270 80.7 Plus
chr2R 21145070 chr2R 606442..606564 1471..1593 270 81.3 Plus
chr2L 23010047 chr2L 21855727..21855852 1468..1593 270 81 Plus
chr4 1351717 chr4 382516..382641 1471..1596 270 81 Plus
chr4 1351717 chr4 983567..983698 1579..1448 270 80.3 Minus
chr2R 21145070 chr2R 5594998..5595122 1235..1359 265 80.8 Plus
chrX 22417052 chrX 22326099..22326241 1452..1595 265 80.6 Plus
chr2L 23010047 chr2L 21714291..21714433 1594..1452 265 79 Minus
chr3RHet 2517486 chr3RHet 1836678..1836817 1596..1457 265 79.3 Minus
chr4 1351717 chr4 170138..170271 1463..1596 265 79.9 Plus
chr4 1351717 chr4 935250..935389 1457..1596 265 79.3 Plus
chr3LHet 2555433 chr3LHet 227254..227381 1579..1452 265 80.5 Minus
chr2R 21145070 chr2R 1041585..1041705 1593..1473 260 81 Minus
chr2R 21145070 chr2R 12039550..12039670 1591..1471 260 81 Minus
chr3L 24539361 chr3L 24154021..24154123 1596..1494 260 83.5 Minus
chrX 22417052 chrX 21880670..21880808 1596..1458 260 79.1 Minus
chr2L 23010047 chr2L 20024630..20024759 1457..1586 260 80 Plus
chr2L 23010047 chr2L 22886607..22886748 1452..1593 260 78.9 Plus
chr3L 24539361 chr3L 163992..164111 1596..1477 255 80.8 Minus
chrX 22417052 chrX 20648533..20648655 1471..1593 255 80.5 Plus
chrX 22417052 chrX 21972030..21972137 1578..1471 255 82.4 Minus
chr4 1351717 chr4 520230..520376 1594..1448 255 78.2 Minus
chr4 1351717 chr4 1111633..1111767 1462..1596 255 79.3 Plus
chr3L 24539361 chr3L 23479184..23479323 1457..1596 250 78.6 Plus
chrX 22417052 chrX 559618..559697 1452..1531 250 87.5 Plus
chrX 22417052 chrX 22090143..22090282 1448..1587 250 78.6 Plus
chr4 1351717 chr4 1135278..1135399 1472..1593 250 80.3 Plus
chr3R 27901430 chr3R 3643..3751 1596..1488 245 81.7 Minus
chr3R 27901430 chr3R 27892237..27892354 1479..1596 245 80.5 Plus
chr3R 27901430 chr3R 27892881..27892998 1479..1596 245 80.5 Plus
chr3L 24539361 chr3L 22991725..22991869 1448..1596 245 79.2 Plus
chr3L 24539361 chr3L 24237519..24237645 1453..1579 245 79.5 Plus
chr2RHet 3288813 chr2RHet 1729296..1729437 1598..1457 245 78.2 Minus
chrX 22417052 chrX 21997920..21998061 1593..1452 245 78.2 Minus
chrX 22417052 chrX 22185158..22185281 1471..1594 245 79.8 Plus
chr2L 23010047 chr2L 21710135..21710234 1593..1494 245 83 Minus
chr3RHet 2517486 chr3RHet 611521..611662 1593..1452 245 78.2 Minus
chrX 22417052 chrX 20441463..20441576 1565..1452 240 80.7 Minus
chrX 22417052 chrX 21371047..21371190 1595..1452 240 77.8 Minus
chrX 22417052 chrX 22271565..22271666 1572..1471 240 82.4 Minus
chr2L 23010047 chr2L 116550..116699 1600..1451 240 77.3 Minus
chr2L 23010047 chr2L 22079535..22079657 1575..1453 240 79.7 Minus
chrXHet 204175 chrXHet 69782..69907 1577..1452 240 79.4 Minus
chr3RHet 2517486 chr3RHet 1963123..1963248 1596..1471 240 79.4 Minus
chr4 1351717 chr4 1044271..1044405 1592..1457 240 80.1 Minus
chr3LHet 2555433 chr3LHet 229460..229540 1451..1531 240 86.4 Plus
chr2R 21145070 chr2R 1361416..1361554 1457..1597 235 79.4 Plus
chr3L 24539361 chr3L 22500796..22500875 1531..1452 235 86.2 Minus
chr2RHet 3288813 chr2RHet 3153655..3153734 1531..1452 235 86.2 Minus
chrX 22417052 chrX 15465958..15466037 1452..1531 235 86.2 Plus
chrX 22417052 chrX 19189670..19189785 1479..1594 235 80.2 Plus
chrX 22417052 chrX 22109237..22109364 1579..1452 235 78.9 Minus
chr2L 23010047 chr2L 21786717..21786799 1497..1579 235 85.5 Plus
chr2L 23010047 chr2L 22126349..22126422 1531..1458 235 87.8 Minus
chr2L 23010047 chr2L 22161764..22161903 1591..1452 235 77.9 Minus
chr2L 23010047 chr2L 22191696..22191844 1448..1596 235 77.2 Plus
chr3RHet 2517486 chr3RHet 1120041..1120141 1497..1597 235 82.2 Plus
chr3RHet 2517486 chr3RHet 1124954..1125054 1497..1597 235 82.2 Plus
chr4 1351717 chr4 973426..973499 1531..1458 235 87.8 Minus
chr3LHet 2555433 chr3LHet 208616..208746 1594..1464 235 78.6 Minus
chr3LHet 2555433 chr3LHet 836645..836724 1531..1452 235 86.2 Minus
chr2R 21145070 chr2R 1251364..1251508 1452..1596 230 77.2 Plus
chr2R 21145070 chr2R 1841952..1842060 1579..1471 230 80.7 Minus
chr3R 27901430 chr3R 81740..81845 1593..1488 230 81.1 Minus
chr3R 27901430 chr3R 27866445..27866571 1578..1452 230 78.7 Minus
chr3L 24539361 chr3L 22768987..22769125 1590..1451 230 79.3 Minus
chr3L 24539361 chr3L 23732101..23732191 1542..1452 230 83.5 Minus
chr3L 24539361 chr3L 23831228..23831306 1452..1530 230 86.1 Plus
chrX 22417052 chrX 21890366..21890465 1596..1497 230 82 Minus
chr2L 23010047 chr2L 21255283..21255424 1452..1594 230 79 Plus
chr2L 23010047 chr2L 21728314..21728389 1452..1527 230 86.8 Plus
chr3RHet 2517486 chr3RHet 1703343..1703466 1594..1471 230 79 Minus
chr4 1351717 chr4 255822..255924 1574..1472 230 81.6 Minus
chr3LHet 2555433 chr3LHet 42995..43109 1458..1572 230 80 Plus
chr2R 21145070 chr2R 405930..406047 1596..1476 225 81 Minus
chr2R 21145070 chr2R 21141917..21141973 1529..1473 225 93 Minus
chrX 22417052 chrX 200803..200935 1462..1593 225 79.7 Plus
chrX 22417052 chrX 1712774..1712848 1457..1531 225 86.7 Plus
chrX 22417052 chrX 20760261..20760332 1452..1523 225 87.5 Plus
chr2L 23010047 chr2L 21578787..21578900 1565..1452 225 79.8 Minus
chr2L 23010047 chr2L 22892393..22892515 1593..1471 225 78.9 Minus
chr4 1351717 chr4 124152..124284 1463..1593 225 79.7 Plus
chr4 1351717 chr4 533362..533457 1593..1498 225 82.3 Minus
chr3LHet 2555433 chr3LHet 1314641..1314763 1471..1593 225 78.9 Plus
chr3LHet 2555433 chr3LHet 2011737..2011832 1593..1498 225 82.3 Minus
chr2R 21145070 chr2R 1003947..1004026 1452..1531 220 85 Plus
chr2R 21145070 chr2R 297782..297849 1464..1531 220 88.2 Plus
chr2R 21145070 chr2R 1211858..1211988 1457..1587 220 77.9 Plus
chr3R 27901430 chr3R 27894933..27895042 1586..1477 220 80 Minus
chr3L 24539361 chr3L 23324455..23324522 1452..1519 220 88.2 Plus
chr3L 24539361 chr3L 23691864..23691940 1452..1528 220 85.7 Plus
chr2RHet 3288813 chr2RHet 468816..468946 1593..1463 220 77.9 Minus
chr2RHet 3288813 chr2RHet 611323..611441 1477..1595 220 79 Plus
chr2RHet 3288813 chr2RHet 2777342..2777457 1579..1464 220 79.3 Minus
chrX 22417052 chrX 15464710..15464789 1452..1531 220 85 Plus
chrX 22417052 chrX 22414948..22415015 1464..1531 220 88.2 Plus
chr2L 23010047 chr2L 22367909..22367988 1531..1452 220 85 Minus
chr2L 23010047 chr2L 21342109..21342236 1579..1452 220 78.1 Minus
chr2L 23010047 chr2L 21749771..21749838 1531..1464 220 88.2 Minus
chr2L 23010047 chr2L 22051764..22051843 1531..1452 220 85 Minus
chr3LHet 2555433 chr3LHet 36814..36893 1531..1452 220 85 Minus
chr2R 21145070 chr2R 1580348..1580444 1497..1593 215 81.4 Plus
chr3R 27901430 chr3R 132491..132566 1527..1452 215 85.5 Minus
chr3L 24539361 chr3L 22709310..22709379 1462..1531 215 87.1 Plus
chr3L 24539361 chr3L 23073586..23073646 1471..1531 215 90.2 Plus
chr2L 23010047 chr2L 22254996..22255122 1452..1578 215 78 Plus
chr4 1351717 chr4 254041..254110 1531..1462 215 87.1 Minus
chr4 1351717 chr4 661598..661739 1452..1593 215 76.8 Plus
chr3LHet 2555433 chr3LHet 280064..280208 1596..1452 215 76.6 Minus
chr2R 21145070 chr2R 686274..686381 1579..1472 210 79.6 Minus
chr2R 21145070 chr2R 1239796..1239867 1523..1452 210 86.1 Minus
chr2R 21145070 chr2R 1853112..1853255 1595..1452 210 76.4 Minus
chr3R 27901430 chr3R 1502379..1502453 1531..1457 210 85.3 Minus
chr3L 24539361 chr3L 22006228..22006344 1452..1568 210 78.6 Plus
chr3L 24539361 chr3L 24174001..24174120 1475..1594 210 78.3 Plus
chr3L 24539361 chr3L 24195646..24195705 1531..1472 210 90 Minus
chrX 22417052 chrX 26669..26734 1528..1463 210 87.9 Minus
chrX 22417052 chrX 1040183..1040266 1531..1448 210 83.3 Minus
chrX 22417052 chrX 11797401..11797460 1464..1523 210 90 Plus
chrX 22417052 chrX 21982234..21982293 1472..1531 210 90 Plus
chr2L 23010047 chr2L 16678300..16678392 1494..1586 210 81.7 Plus
chr4 1351717 chr4 673838..673912 1457..1531 210 85.3 Plus
chr4 1351717 chr4 719561..719623 1471..1533 210 88.9 Plus
chr4 1351717 chr4 890835..890894 1471..1530 210 90 Plus
chr3LHet 2555433 chr3LHet 2263865..2263945 1532..1452 210 84 Minus
chr3LHet 2555433 chr3LHet 2278464..2278529 1529..1464 210 87.9 Minus
chr2R 21145070 chr2R 593540..593667 1452..1579 205 77.3 Plus
chr2R 21145070 chr2R 887519..887586 1464..1531 205 86.8 Plus
chr2R 21145070 chr2R 1018022..1018101 1531..1452 205 83.8 Minus
chr3L 24539361 chr3L 22971667..22971728 1471..1532 205 88.7 Plus
chr3L 24539361 chr3L 23278373..23278452 1452..1531 205 83.8 Plus
chr3L 24539361 chr3L 18837538..18837605 1464..1531 205 86.8 Plus
chr3L 24539361 chr3L 20044950..20045017 1452..1519 205 86.8 Plus
chr2RHet 3288813 chr2RHet 1880139..1880245 1471..1577 205 79.4 Plus
chrX 22417052 chrX 1039013..1039092 1531..1452 205 83.8 Minus
chrX 22417052 chrX 20392391..20392519 1579..1452 205 79.1 Minus
chrX 22417052 chrX 21180935..21180996 1471..1532 205 88.7 Plus
chrX 22417052 chrX 21912583..21912644 1532..1471 205 88.7 Minus
chrX 22417052 chrX 22234071..22234138 1531..1464 205 86.8 Minus
chr2L 23010047 chr2L 7231892..7231962 1532..1462 205 85.9 Minus
chr2L 23010047 chr2L 21198953..21199032 1531..1452 205 83.8 Minus
chr2L 23010047 chr2L 21382111..21382181 1522..1452 205 85.9 Minus
chr2L 23010047 chr2L 22061272..22061408 1457..1593 205 76.6 Plus
chr2L 23010047 chr2L 22174919..22175025 1490..1597 205 81.5 Plus
chr4 1351717 chr4 430074..430153 1531..1452 205 83.8 Minus
chr4 1351717 chr4 470219..470337 1452..1570 205 78.2 Plus
chr3LHet 2555433 chr3LHet 2455377..2455438 1532..1471 205 88.7 Minus
chr2R 21145070 chr2R 1037472..1037621 1596..1452 200 78.7 Minus
chr2R 21145070 chr2R 1078373..1078448 1456..1531 200 84.2 Plus
chr2R 21145070 chr2R 1131318..1131444 1453..1579 200 77.2 Plus
chr2R 21145070 chr2R 1404332..1404392 1531..1471 200 88.5 Minus
chr2R 21145070 chr2R 1836499..1836589 1587..1497 200 81.3 Minus
chr3R 27901430 chr3R 71989..72055 1518..1452 200 86.6 Minus
chr3R 27901430 chr3R 14083467..14083599 1606..1474 200 76.7 Minus
chr3L 24539361 chr3L 23476532..23476610 1452..1530 200 83.5 Plus
chrX 22417052 chrX 21882191..21882314 1575..1452 200 77.4 Minus
chr2L 23010047 chr2L 3462599..3462662 1463..1526 200 87.5 Plus
chr2L 23010047 chr2L 21581993..21582070 1531..1452 200 86.2 Minus
chr2L 23010047 chr2L 21795919..21795997 1530..1452 200 83.5 Minus
chr4 1351717 chr4 835596..835671 1523..1448 200 84.2 Minus
chr3LHet 2555433 chr3LHet 2460892..2460991 1596..1497 200 80 Minus
chr3LHet 2555433 chr3LHet 2482132..2482174 1490..1532 200 97.7 Plus
chr3LHet 2555433 chr3LHet 1382009..1382069 1531..1471 200 88.5 Minus
chr3LHet 2555433 chr3LHet 1419396..1419456 1471..1531 200 88.5 Plus
chr3LHet 2555433 chr3LHet 1423984..1424044 1471..1531 200 88.5 Plus
chr2R 21145070 chr2R 295019..295135 1578..1462 195 77.8 Minus
chr2R 21145070 chr2R 3283653..3283775 1593..1471 195 77.2 Minus
chr3L 24539361 chr3L 22750121..22750219 1495..1593 195 79.8 Plus
chr3L 24539361 chr3L 23313995..23314093 1498..1597 195 82 Plus
chrX 22417052 chrX 4021399..4021497 1593..1495 195 79.8 Minus
chrX 22417052 chrX 21299530..21299589 1472..1531 195 88.3 Plus
chr2L 23010047 chr2L 21921502..21921582 1532..1452 195 82.7 Minus
chr3RHet 2517486 chr3RHet 230433..230552 1474..1593 195 77.5 Plus
chr3RHet 2517486 chr3RHet 1688928..1689002 1531..1457 195 84 Minus
chr3RHet 2517486 chr3RHet 2073927..2074016 1565..1476 195 81.1 Minus
chr4 1351717 chr4 540946..541014 1520..1452 195 85.5 Minus
chr4 1351717 chr4 1099961..1100011 1522..1472 195 92.2 Minus
chr2R 21145070 chr2R 527886..528007 1593..1472 190 77 Minus
chr2R 21145070 chr2R 892850..892917 1531..1464 190 85.3 Minus
chr2R 21145070 chr2R 1607152..1607246 1558..1464 190 80 Minus
chr2R 21145070 chr2R 20993124..20993179 1474..1529 190 89.3 Plus
chr3L 24539361 chr3L 18077671..18077765 1499..1593 190 80 Plus
chr3L 24539361 chr3L 23175639..23175712 1458..1531 190 83.8 Plus
chr3L 24539361 chr3L 23215382..23215506 1471..1595 190 76.8 Plus
chr3L 24539361 chr3L 23220333..23220400 1464..1531 190 85.3 Plus
chr3L 24539361 chr3L 23258177..23258244 1464..1531 190 85.3 Plus
chr3L 24539361 chr3L 24185853..24185950 1593..1495 190 81.8 Minus
chr3L 24539361 chr3L 24206594..24206691 1593..1495 190 81.8 Minus
chr3L 24539361 chr3L 24355289..24355368 1531..1452 190 82.5 Minus
chr2RHet 3288813 chr2RHet 1856426..1856535 1457..1566 190 78.2 Plus
chrX 22417052 chrX 20625..20683 1471..1529 190 88.1 Plus
chrX 22417052 chrX 16431186..16431289 1598..1495 190 78.8 Minus
chrX 22417052 chrX 18732391..18732461 1452..1522 190 84.5 Plus
chrX 22417052 chrX 19849436..19849515 1452..1531 190 82.5 Plus
chrX 22417052 chrX 20124252..20124331 1530..1451 190 82.5 Minus
chrX 22417052 chrX 21996060..21996127 1464..1531 190 85.3 Plus
chr2L 23010047 chr2L 4029940..4030061 1593..1472 190 77 Minus
chr2L 23010047 chr2L 17972328..17972380 1523..1471 190 90.6 Minus
chr2L 23010047 chr2L 22468636..22468756 1593..1471 190 78.9 Minus
chr2L 23010047 chr2L 22581918..22582024 1579..1473 190 78.5 Minus
chr2R 21145070 chr2R 1497955..1498057 1494..1596 185 78.6 Plus
chr2R 21145070 chr2R 1380165..1380237 1458..1531 185 86.5 Plus
chr3R 27901430 chr3R 3590605..3590665 1531..1471 185 86.9 Minus
chr3R 27901430 chr3R 14039423..14039486 1458..1521 185 85.9 Plus
chr3L 24539361 chr3L 21733..21808 1457..1532 185 82.9 Plus
chr3L 24539361 chr3L 9431685..9431775 1587..1497 185 80.2 Minus
chr3L 24539361 chr3L 20648698..20648821 1471..1595 185 78.4 Plus
chr2RHet 3288813 chr2RHet 2899020..2899089 1463..1532 185 84.3 Plus
chr2RHet 3288813 chr2RHet 2907189..2907334 1595..1452 185 76.7 Minus
chrX 22417052 chrX 599234..599294 1523..1463 185 86.9 Minus
chrX 22417052 chrX 5149233..5149326 1495..1588 185 79.8 Plus
chrX 22417052 chrX 10217722..10217779 1529..1472 185 87.9 Minus
chrX 22417052 chrX 17137148..17137232 1495..1579 185 81.2 Plus
chr2L 23010047 chr2L 21263887..21263947 1531..1471 185 86.9 Minus
chr2L 23010047 chr2L 21376143..21376203 1523..1463 185 86.9 Minus
chrXHet 204175 chrXHet 2920..2983 1515..1452 185 85.9 Minus
chr4 1351717 chr4 410321..410459 1596..1458 185 75.5 Minus
chr4 1351717 chr4 906990..907083 1494..1587 185 79.8 Plus
chr4 1351717 chr4 965698..965806 1488..1596 185 78 Plus
chr4 1351717 chr4 1110178..1110238 1532..1472 185 86.9 Minus
chr3LHet 2555433 chr3LHet 1050537..1050636 1570..1471 185 79 Minus
chr3LHet 2555433 chr3LHet 893840..893894 1476..1530 185 89.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:20:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9705135..9706149 617..1631 5075 100 Plus
2R 25286936 2R 9704384..9704807 2..425 2120 100 Plus
2R 25286936 2R 9707019..9707419 617..1017 1480 91.3 Plus
2R 25286936 2R 9706269..9706692 2..425 1340 87.7 Plus
2R 25286936 2R 9704871..9705064 425..618 970 100 Plus
2R 25286936 2R 9706755..9706948 425..618 835 95.4 Plus
3R 32079331 3R 32064597..32064741 1452..1596 350 82.8 Plus
2R 25286936 2R 2642043..2642168 1596..1471 345 84.9 Minus
2R 25286936 2R 25173137..25173289 1452..1604 345 81.7 Plus
3L 28110227 3L 23035440..23035574 1462..1596 345 83.7 Plus
2R 25286936 2R 2247619..2247762 1452..1595 330 81.9 Plus
X 23542271 X 22924110..22924254 1452..1596 320 81.4 Plus
2L 23513712 2L 22067989..22068130 1452..1593 320 81.7 Plus
2R 25286936 2R 2246574..2246711 1595..1458 315 81.9 Minus
2R 25286936 2R 2431807..2431950 1452..1595 315 81.2 Plus
2R 25286936 2R 2437291..2437434 1452..1595 315 81.2 Plus
2R 25286936 2R 2446988..2447131 1452..1595 315 81.2 Plus
2R 25286936 2R 2470109..2470252 1452..1595 315 81.2 Plus
2R 25286936 2R 2477820..2477963 1452..1595 315 81.2 Plus
2R 25286936 2R 2485533..2485676 1452..1595 315 81.2 Plus
3R 32079331 3R 3628216..3628356 1592..1452 315 81.6 Minus
X 23542271 X 23029467..23029601 1452..1586 315 82.2 Plus
2R 25286936 2R 12138561..12138685 1471..1596 310 84.9 Plus
3L 28110227 3L 6315161..6315288 1579..1452 310 82.8 Minus
X 23542271 X 22849669..22849808 1457..1596 310 81.4 Plus
2R 25286936 2R 5445474..5445599 1471..1596 300 82.5 Plus
3R 32079331 3R 7040027..7040161 1596..1462 300 81.5 Minus
X 23542271 X 22904150..22904299 1447..1596 300 80 Plus
3R 32079331 3R 2548205..2548350 1452..1597 295 80.1 Plus
3R 32079331 3R 2553133..2553278 1452..1597 295 80.1 Plus
2L 23513712 2L 21267565..21267703 1596..1458 290 80.6 Minus
4 1348131 4 516058..516187 1464..1593 290 81.5 Plus
2R 25286936 2R 2452195..2452338 1452..1595 285 79.9 Plus
3L 28110227 3L 25340525..25340641 1588..1472 285 82.9 Minus
X 23542271 X 23043696..23043824 1468..1596 285 81.4 Plus
4 1348131 4 1102762..1102902 1452..1593 285 81.7 Plus
3R 32079331 3R 5552223..5552302 1452..1531 280 90 Plus
3R 32079331 3R 32069411..32069544 1586..1453 280 80.6 Minus
X 23542271 X 18619936..18620072 1457..1593 280 80.3 Plus
X 23542271 X 19872952..19873031 1452..1531 280 90 Plus
4 1348131 4 1127644..1127789 1596..1451 280 79.5 Minus
2R 25286936 2R 5733448..5733592 1596..1452 275 79.3 Minus
2R 25286936 2R 6198508..6198649 1452..1593 275 79.6 Plus
3R 32079331 3R 3774162..3774303 1593..1452 275 79.6 Minus
X 23542271 X 15555082..15555226 1452..1596 275 79.3 Plus
X 23542271 X 21216357..21216502 1452..1596 275 80.8 Plus
X 23542271 X 22601957..22602098 1593..1452 275 79.6 Minus
2R 25286936 2R 4693895..4694038 1452..1596 270 80.7 Plus
2R 25286936 2R 4718858..4718980 1471..1593 270 81.3 Plus
X 23542271 X 21002415..21002561 1603..1457 270 78.9 Minus
2L 23513712 2L 21857208..21857333 1468..1593 270 81 Plus
4 1348131 4 361941..362066 1471..1596 270 81 Plus
4 1348131 4 963047..963178 1579..1448 270 80.3 Minus
4 1348131 4 1091149..1091283 1462..1596 270 80 Plus
2R 25286936 2R 9707536..9707660 1235..1359 265 80.8 Plus
3R 32079331 3R 649758..649901 1594..1452 265 80.6 Minus
3R 32079331 3R 3713239..3713378 1457..1596 265 79.3 Plus
3L 28110227 3L 24743925..24744052 1579..1452 265 80.5 Minus
X 23542271 X 22930070..22930212 1452..1595 265 80.6 Plus
2L 23513712 2L 21715788..21715930 1594..1452 265 79 Minus
4 1348131 4 149504..149637 1463..1596 265 79.9 Plus
4 1348131 4 914718..914857 1457..1596 265 79.3 Plus
2R 25286936 2R 5154117..5154237 1593..1473 260 81 Minus
3R 32079331 3R 7081559..7081700 1593..1452 260 78.9 Minus
3L 28110227 3L 24165114..24165216 1596..1494 260 83.5 Minus
X 23542271 X 22484704..22484842 1596..1458 260 79.1 Minus
2L 23513712 2L 20026262..20026391 1457..1586 260 80 Plus
2L 23513712 2L 22995368..22995509 1452..1593 260 78.9 Plus
3L 28110227 3L 164030..164149 1596..1477 255 80.8 Minus
3L 28110227 3L 9439786..9439902 1587..1471 255 81.2 Minus
X 23542271 X 20783190..20783312 1471..1593 255 80.5 Plus
X 23542271 X 22576064..22576171 1578..1471 255 82.4 Minus
4 1348131 4 499680..499826 1594..1448 255 78.2 Minus
3L 28110227 3L 23490267..23490406 1457..1596 250 78.6 Plus
X 23542271 X 665647..665726 1452..1531 250 87.5 Plus
X 23542271 X 22694152..22694291 1448..1587 250 78.6 Plus
4 1348131 4 1114802..1114923 1472..1593 250 80.3 Plus
2R 25286936 2R 2954252..2954393 1598..1457 245 78.2 Minus
3R 32079331 3R 893923..894064 1452..1593 245 78.2 Plus
3R 32079331 3R 4177921..4178029 1596..1488 245 81.7 Minus
3R 32079331 3R 32070138..32070255 1479..1596 245 80.5 Plus
3R 32079331 3R 32070782..32070899 1479..1596 245 80.5 Plus
3L 28110227 3L 23002807..23002951 1448..1596 245 79.2 Plus
3L 28110227 3L 24248611..24248737 1453..1579 245 79.5 Plus
X 23542271 X 22789125..22789248 1471..1594 245 79.8 Plus
2L 23513712 2L 21711632..21711731 1593..1494 245 83 Minus
U 3151297 U 827283..827391 1471..1579 245 81.7 Plus
3R 32079331 3R 1853074..1853157 1531..1448 240 85.7 Minus
3R 32079331 3R 3524910..3525035 1471..1596 240 79.4 Plus
3L 28110227 3L 24746131..24746211 1451..1531 240 86.4 Plus
X 23542271 X 20576045..20576158 1565..1452 240 80.7 Minus
X 23542271 X 20894941..20895012 1452..1523 240 88.9 Plus
X 23542271 X 21505889..21506032 1595..1452 240 77.8 Minus
X 23542271 X 22875587..22875688 1572..1471 240 82.4 Minus
X 23542271 X 23090907..23091032 1577..1452 240 79.4 Minus
2L 23513712 2L 116513..116662 1600..1451 240 77.3 Minus
2L 23513712 2L 22080975..22081097 1575..1453 240 79.7 Minus
4 1348131 4 1023740..1023874 1592..1457 240 80.1 Minus
2R 25286936 2R 16152232..16152353 1592..1471 235 79.5 Minus
2R 25286936 2R 3917441..3917520 1531..1452 235 86.2 Minus
2R 25286936 2R 5474052..5474190 1457..1597 235 79.4 Plus
3R 32079331 3R 32072834..32072943 1586..1477 235 80.9 Minus
3L 28110227 3L 22511888..22511967 1531..1452 235 86.2 Minus
3L 28110227 3L 24725287..24725417 1594..1464 235 78.6 Minus
3L 28110227 3L 25351168..25351247 1531..1452 235 86.2 Minus
X 23542271 X 15576040..15576119 1452..1531 235 86.2 Plus
X 23542271 X 19300775..19300890 1479..1594 235 80.2 Plus
X 23542271 X 22713262..22713389 1579..1452 235 78.9 Minus
2L 23513712 2L 21788189..21788271 1497..1579 235 85.5 Plus
2L 23513712 2L 22127803..22127876 1531..1458 235 87.8 Minus
2L 23513712 2L 22163229..22163368 1591..1452 235 77.9 Minus
2L 23513712 2L 22193168..22193316 1448..1596 235 77.2 Plus
4 1348131 4 952907..952980 1531..1458 235 87.8 Minus
2R 25286936 2R 5363951..5364095 1452..1596 230 77.2 Plus
2R 25286936 2R 5954743..5954851 1579..1471 230 80.7 Minus
3R 32079331 3R 32044342..32044468 1578..1452 230 78.7 Minus
3R 32079331 3R 3063370..3063493 1471..1594 230 79 Plus
3R 32079331 3R 3849322..3849445 1471..1594 230 79 Plus
3R 32079331 3R 4256019..4256124 1593..1488 230 81.1 Minus
3L 28110227 3L 22780082..22780220 1590..1451 230 79.3 Minus
3L 28110227 3L 23743195..23743285 1542..1452 230 83.5 Minus
3L 28110227 3L 23842328..23842406 1452..1530 230 86.1 Plus
X 23542271 X 22494400..22494499 1596..1497 230 82 Minus
2L 23513712 2L 21256764..21256905 1452..1594 230 79 Plus
2L 23513712 2L 21729801..21729876 1452..1527 230 86.8 Plus
4 1348131 4 235241..235343 1574..1472 230 81.6 Minus
Y 3667352 Y 704371..704485 1458..1572 230 80 Plus
2R 25286936 2R 4518330..4518447 1596..1476 225 81 Minus
2R 25286936 2R 25256032..25256088 1529..1473 225 93 Minus
3L 28110227 3L 25931982..25932104 1471..1593 225 78.9 Plus
3L 28110227 3L 26729446..26729541 1593..1498 225 82.3 Minus
X 23542271 X 1818903..1818977 1457..1531 225 86.7 Plus
X 23542271 X 306801..306933 1462..1593 225 79.7 Plus
X 23542271 X 7015079..7015198 1472..1591 225 79.2 Plus
X 23542271 X 19810139..19810255 1478..1594 225 79.5 Plus
2L 23513712 2L 21580292..21580405 1565..1452 225 79.8 Minus
2L 23513712 2L 23001154..23001276 1593..1471 225 78.9 Minus
4 1348131 4 103516..103648 1463..1593 225 79.7 Plus
4 1348131 4 512812..512907 1593..1498 225 82.3 Minus
U 3151297 U 2800417..2800494 1529..1452 225 85.9 Minus
2R 25286936 2R 555889..556034 1597..1452 220 76.7 Minus
2R 25286936 2R 1342121..1342251 1593..1463 220 77.9 Minus
2R 25286936 2R 1868188..1868306 1477..1595 220 79 Plus
2R 25286936 2R 4410186..4410253 1464..1531 220 88.2 Plus
2R 25286936 2R 5116457..5116536 1452..1531 220 85 Plus
2R 25286936 2R 5324464..5324594 1457..1587 220 77.9 Plus
3L 28110227 3L 23335537..23335604 1452..1519 220 88.2 Plus
3L 28110227 3L 23702958..23703034 1452..1528 220 85.7 Plus
3L 28110227 3L 28011059..28011174 1464..1579 220 79.3 Plus
X 23542271 X 23018886..23018953 1464..1531 220 88.2 Plus
2L 23513712 2L 21343586..21343713 1579..1452 220 78.1 Minus
2L 23513712 2L 21751217..21751284 1531..1464 220 88.2 Minus
2L 23513712 2L 22053172..22053251 1531..1452 220 85 Minus
2L 23513712 2L 22369401..22369480 1531..1452 220 85 Minus
Y 3667352 Y 695444..695523 1531..1452 220 85 Minus
2R 25286936 2R 578560..578701 1452..1594 215 78.3 Plus
2R 25286936 2R 5692973..5693069 1497..1593 215 81.4 Plus
3R 32079331 3R 4306771..4306846 1527..1452 215 85.5 Minus
3L 28110227 3L 22720407..22720476 1462..1531 215 87.1 Plus
3L 28110227 3L 23084667..23084727 1471..1531 215 90.2 Plus
3L 28110227 3L 24796735..24796879 1596..1452 215 76.6 Minus
2L 23513712 2L 22256461..22256587 1452..1578 215 78 Plus
4 1348131 4 233460..233529 1531..1462 215 87.1 Minus
4 1348131 4 641044..641185 1452..1593 215 76.8 Plus
Y 3667352 Y 1459620..1459749 1457..1586 215 77.7 Plus
Y 3667352 Y 1881817..1881946 1586..1457 215 77.7 Minus
2R 25286936 2R 2737493..2737543 1473..1523 210 94.1 Plus
2R 25286936 2R 4798704..4798811 1579..1472 210 79.6 Minus
2R 25286936 2R 5352378..5352449 1523..1452 210 86.1 Minus
2R 25286936 2R 5965895..5966038 1595..1452 210 76.4 Minus
3R 32079331 3R 5676721..5676795 1531..1457 210 85.3 Minus
3L 28110227 3L 22017293..22017409 1452..1568 210 78.6 Plus
3L 28110227 3L 24185094..24185213 1475..1594 210 78.3 Plus
3L 28110227 3L 24206739..24206798 1531..1472 210 90 Minus
3L 28110227 3L 27156540..27156620 1532..1452 210 84 Minus
3L 28110227 3L 27171137..27171202 1529..1464 210 87.9 Minus
X 23542271 X 130285..130350 1528..1463 210 87.9 Minus
X 23542271 X 11906262..11906321 1464..1523 210 90 Plus
X 23542271 X 22586268..22586327 1472..1531 210 90 Plus
2L 23513712 2L 16679603..16679695 1494..1586 210 81.7 Plus
4 1348131 4 653284..653358 1457..1531 210 85.3 Plus
4 1348131 4 698993..699055 1471..1533 210 88.9 Plus
4 1348131 4 870304..870363 1471..1530 210 90 Plus
2R 25286936 2R 4999899..4999966 1464..1531 205 86.8 Plus
2R 25286936 2R 5130556..5130635 1531..1452 205 83.8 Minus
2R 25286936 2R 25107196..25107251 1474..1529 205 91.1 Plus
2R 25286936 2R 3097001..3097107 1471..1577 205 79.4 Plus
2R 25286936 2R 4705955..4706082 1452..1579 205 77.3 Plus
3L 28110227 3L 18847892..18847959 1464..1531 205 86.8 Plus
3L 28110227 3L 20055660..20055727 1452..1519 205 86.8 Plus
3L 28110227 3L 22982747..22982808 1471..1532 205 88.7 Plus
3L 28110227 3L 23289453..23289532 1452..1531 205 83.8 Plus
3L 28110227 3L 27332450..27332511 1532..1471 205 88.7 Minus
X 23542271 X 1145049..1145128 1531..1452 205 83.8 Minus
X 23542271 X 15574792..15574862 1452..1522 205 85.9 Plus
X 23542271 X 21315778..21315839 1471..1532 205 88.7 Plus
X 23542271 X 22516617..22516678 1532..1471 205 88.7 Minus
X 23542271 X 22838067..22838134 1531..1464 205 86.8 Minus
2L 23513712 2L 7232880..7232950 1532..1462 205 85.9 Minus
2L 23513712 2L 21200421..21200500 1531..1452 205 83.8 Minus
2L 23513712 2L 21383596..21383666 1522..1452 205 85.9 Minus
2L 23513712 2L 22062670..22062806 1457..1593 205 76.6 Plus
2L 23513712 2L 22176395..22176501 1490..1597 205 81.5 Plus
2L 23513712 2L 23170139..23170245 1578..1472 205 79.4 Minus
4 1348131 4 409518..409597 1531..1452 205 83.8 Minus
4 1348131 4 449660..449778 1452..1570 205 78.2 Plus
U 3151297 U 833686..833792 1558..1452 205 79.4 Minus
3R 32079331 3R 1840040..1840115 1448..1523 200 84.2 Plus
3R 32079331 3R 4246267..4246333 1518..1452 200 86.6 Minus
3R 32079331 3R 18259173..18259305 1606..1474 200 76.7 Minus
3L 28110227 3L 23487615..23487693 1452..1530 200 83.5 Plus
3L 28110227 3L 25999345..25999405 1531..1471 200 88.5 Minus
3L 28110227 3L 26036732..26036792 1471..1531 200 88.5 Plus
3L 28110227 3L 26041320..26041380 1471..1531 200 88.5 Plus
3L 28110227 3L 27337965..27338064 1596..1497 200 80 Minus
3L 28110227 3L 27359206..27359248 1490..1532 200 97.7 Plus
X 23542271 X 22486225..22486348 1575..1452 200 77.4 Minus
2L 23513712 2L 21583498..21583575 1531..1452 200 86.2 Minus
2L 23513712 2L 21797392..21797470 1530..1452 200 83.5 Minus
4 1348131 4 815021..815096 1523..1448 200 84.2 Minus
Y 3667352 Y 1886780..1886909 1586..1457 200 76.9 Minus
3R 32079331 3R 3407544..3407633 1476..1565 195 81.1 Plus
3R 32079331 3R 3426687..3426776 1476..1565 195 81.1 Plus
3R 32079331 3R 3863786..3863860 1457..1531 195 84 Plus
3R 32079331 3R 1203836..1203955 1593..1474 195 77.5 Minus
3R 32079331 3R 2414274..2414375 1472..1573 195 79.4 Plus
3L 28110227 3L 22761216..22761314 1495..1593 195 79.8 Plus
3L 28110227 3L 23325076..23325174 1498..1597 195 82 Plus
X 23542271 X 1146219..1146278 1531..1472 195 88.3 Minus
X 23542271 X 21434372..21434431 1472..1531 195 88.3 Plus
2L 23513712 2L 3463003..3463077 1452..1526 195 84 Plus
2L 23513712 2L 21922973..21923053 1532..1452 195 82.7 Minus
4 1348131 4 520395..520463 1520..1452 195 85.5 Minus
4 1348131 4 1079469..1079519 1522..1472 195 92.2 Minus
3R 32079331 3R 1857331..1857407 1529..1453 190 83.1 Minus
3L 28110227 3L 18087983..18088077 1499..1593 190 80 Plus
3L 28110227 3L 23186707..23186780 1458..1531 190 83.8 Plus
3L 28110227 3L 23226450..23226574 1471..1595 190 76.8 Plus
3L 28110227 3L 23231401..23231468 1464..1531 190 85.3 Plus
3L 28110227 3L 23269257..23269324 1464..1531 190 85.3 Plus
3L 28110227 3L 24196946..24197043 1593..1495 190 81.8 Minus
3L 28110227 3L 24217686..24217783 1593..1495 190 81.8 Minus
X 23542271 X 124241..124299 1471..1529 190 88.1 Plus
X 23542271 X 18843233..18843303 1452..1522 190 84.5 Plus
X 23542271 X 19960833..19960912 1452..1531 190 82.5 Plus
X 23542271 X 20258726..20258805 1530..1451 190 82.5 Minus
X 23542271 X 22600097..22600164 1464..1531 190 85.3 Plus
2L 23513712 2L 17973694..17973746 1523..1471 190 90.6 Minus
2L 23513712 2L 21936116..21936210 1567..1473 190 80 Minus
2L 23513712 2L 22577417..22577537 1593..1471 190 78.9 Minus
2L 23513712 2L 22690693..22690799 1579..1473 190 78.5 Minus
U 3151297 U 2819255..2819322 1531..1464 190 85.3 Minus
Ymm 880023 Ymm 729485..729528 1488..1531 190 95.5 Plus
3R 32079331 3R 7764545..7764605 1531..1471 185 86.9 Minus
3R 32079331 3R 18215129..18215192 1458..1521 185 85.9 Plus
X 23542271 X 705253..705313 1523..1463 185 86.9 Minus
X 23542271 X 5256653..5256746 1495..1588 185 79.8 Plus
2L 23513712 2L 21265378..21265438 1531..1471 185 86.9 Minus
2L 23513712 2L 21377627..21377687 1523..1463 185 86.9 Minus
4 1348131 4 389768..389906 1596..1458 185 75.5 Minus
4 1348131 4 886459..886552 1494..1587 185 79.8 Plus
4 1348131 4 945181..945289 1488..1596 185 78 Plus
4 1348131 4 1089693..1089753 1532..1472 185 86.9 Minus
U 3151297 U 90218..90299 1558..1477 185 81.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9706334..9707348 617..1631 5075 100 Plus
2R 25260384 2R 9705583..9706006 2..425 2120 100 Plus
2R 25260384 2R 9708218..9708618 617..1017 1480 91.2 Plus
2R 25260384 2R 9706070..9706263 425..618 970 100 Plus
2R 25260384 2R 9707954..9708147 425..618 835 95.3 Plus
2R 25260384 2R 9707673..9707891 207..425 810 91.3 Plus
2R 25260384 2R 9707468..9707666 2..200 590 86.4 Plus
3L 28103327 3L 23028540..23028674 1462..1596 345 83.7 Plus
2R 25260384 2R 12139760..12139884 1471..1596 320 84.9 Plus
X 23527363 X 22909202..22909346 1452..1596 320 81.3 Plus
X 23527363 X 22889242..22889391 1447..1596 300 80 Plus
X 23527363 X 23028788..23028916 1468..1596 285 81.3 Plus
2R 25260384 2R 2470109..2470188 1452..1531 280 90 Plus
2R 25260384 2R 2446988..2447067 1452..1531 280 90 Plus
2R 25260384 2R 2437291..2437370 1452..1531 280 90 Plus
2R 25260384 2R 2431807..2431886 1452..1531 280 90 Plus
2R 25260384 2R 2485533..2485612 1452..1531 280 90 Plus
2R 25260384 2R 2477820..2477899 1452..1531 280 90 Plus
3L 28103327 3L 6308309..6308388 1531..1452 280 90 Minus
X 23527363 X 19881050..19881129 1452..1531 280 90 Plus
3R 31820162 3R 5293054..5293133 1452..1531 280 90 Plus
X 23527363 X 22587049..22587190 1593..1452 275 79.5 Minus
3R 31820162 3R 3435600..3435741 1593..1452 275 79.5 Minus
2R 25260384 2R 9708735..9708859 1235..1359 265 80.8 Plus
2R 25260384 2R 2247619..2247698 1452..1531 265 88.7 Plus
2R 25260384 2R 5734712..5734791 1531..1452 265 88.7 Minus
4 1331231 4 149504..149637 1463..1596 265 79.8 Plus
2R 25260384 2R 2642108..2642168 1531..1471 260 95 Minus
3L 28103327 3L 24158214..24158316 1596..1494 260 83.4 Minus
X 23527363 X 22561156..22561263 1578..1471 255 82.4 Minus
3R 31820162 3R 3289723..3289794 1523..1452 255 90.2 Minus
4 1331231 4 1127709..1127789 1531..1451 255 87.6 Minus
2R 25260384 2R 2452195..2452265 1452..1522 250 90.1 Plus
X 23527363 X 23014559..23014638 1452..1531 250 87.5 Plus
X 23527363 X 21201449..21201528 1452..1531 250 87.5 Plus
X 23527363 X 673745..673824 1452..1531 250 87.5 Plus
3R 31820162 3R 31805428..31805507 1452..1531 250 87.5 Plus
4 1331231 4 1102762..1102841 1452..1531 250 87.5 Plus
3R 31820162 3R 31811613..31811730 1479..1596 245 80.5 Plus
3R 31820162 3R 31810969..31811086 1479..1596 245 80.5 Plus
3L 28103327 3L 24739231..24739311 1451..1531 240 86.4 Plus
X 23527363 X 20880033..20880104 1452..1523 240 88.8 Plus
X 23527363 X 22834761..22834835 1457..1531 240 88 Plus
3R 31820162 3R 1650652..1650735 1531..1448 240 85.7 Minus
2R 25260384 2R 25174336..25174415 1452..1531 235 86.2 Plus
2R 25260384 2R 6199707..6199786 1452..1531 235 86.2 Plus
2R 25260384 2R 2246638..2246711 1531..1458 235 87.8 Minus
2R 25260384 2R 5155378..5155436 1531..1473 235 93.2 Minus
2R 25260384 2R 3918640..3918719 1531..1452 235 86.2 Minus
3L 28103327 3L 25344268..25344347 1531..1452 235 86.2 Minus
3L 28103327 3L 22504988..22505067 1531..1452 235 86.2 Minus
X 23527363 X 15584138..15584217 1452..1531 235 86.2 Plus
X 23527363 X 15563180..15563259 1452..1531 235 86.2 Plus
X 23527363 X 20561171..20561250 1531..1452 235 86.2 Minus
2L 23513712 2L 22067989..22068068 1452..1531 235 86.2 Plus
2L 23513712 2L 21788189..21788271 1497..1579 235 85.5 Plus
2L 23513712 2L 22127803..22127876 1531..1458 235 87.8 Minus
4 1331231 4 516058..516125 1464..1531 235 89.7 Plus
4 1331231 4 952907..952980 1531..1458 235 87.8 Minus
3L 28103327 3L 23835428..23835506 1452..1530 230 86 Plus
3L 28103327 3L 23736295..23736385 1542..1452 230 83.5 Minus
X 23527363 X 18628034..18628106 1457..1529 230 87.6 Plus
2L 23513712 2L 21729801..21729876 1452..1527 230 86.8 Plus
3R 31820162 3R 6780923..6780992 1531..1462 230 88.5 Minus
3R 31820162 3R 31810297..31810375 1531..1453 230 86 Minus
Y 3410481 Y 979518..979632 1458..1572 230 80 Plus
2R 25260384 2R 25257231..25257287 1529..1473 225 92.9 Minus
X 23527363 X 1827001..1827075 1457..1531 225 86.6 Plus
X 23527363 X 22915162..22915239 1452..1529 225 85.8 Plus
2L 23513712 2L 20026262..20026336 1457..1531 225 86.6 Plus
2L 23513712 2L 21580292..21580405 1565..1452 225 79.8 Minus
4 1331231 4 963095..963178 1531..1448 225 84.5 Minus
4 1331231 4 512812..512907 1593..1498 225 82.2 Minus
Unimproved_211000022280437_4026_5283 1257 Unimproved_211000022280437_4026_5283 491..568 1529..1452 225 85.8 Minus
2R 25260384 2R 4695094..4695173 1452..1531 220 85 Plus
2R 25260384 2R 4411385..4411452 1464..1531 220 88.2 Plus
2R 25260384 2R 5117656..5117735 1452..1531 220 85 Plus
2R 25260384 2R 1342121..1342251 1593..1463 220 77.8 Minus
3L 28103327 3L 23696058..23696134 1452..1528 220 85.7 Plus
3L 28103327 3L 24737073..24737152 1531..1452 220 85 Minus
3L 28103327 3L 23328637..23328704 1452..1519 220 88.2 Plus
X 23527363 X 23003978..23004045 1464..1531 220 88.2 Plus
X 23527363 X 22860722..22860780 1529..1471 220 91.5 Minus
X 23527363 X 23076045..23076124 1531..1452 220 85 Minus
2L 23513712 2L 21751217..21751284 1531..1464 220 88.2 Minus
2L 23513712 2L 21267630..21267703 1531..1458 220 86.4 Minus
2L 23513712 2L 22369401..22369480 1531..1452 220 85 Minus
2L 23513712 2L 22053172..22053251 1531..1452 220 85 Minus
Y 3410481 Y 970591..970670 1531..1452 220 85 Minus
2R 25260384 2R 5446673..5446733 1471..1531 215 90.1 Plus
2R 25260384 2R 4720057..4720117 1471..1531 215 90.1 Plus
2R 25260384 2R 5694172..5694268 1497..1593 215 81.4 Plus
3L 28103327 3L 22713507..22713576 1462..1531 215 87.1 Plus
3L 28103327 3L 23077767..23077827 1471..1531 215 90.1 Plus
3L 28103327 3L 24241711..24241789 1453..1531 215 84.8 Plus
3L 28103327 3L 22773239..22773320 1532..1451 215 84.1 Minus
X 23527363 X 20768282..20768342 1471..1531 215 90.1 Plus
2L 23513712 2L 21256764..21256842 1452..1530 215 84.8 Plus
2L 23513712 2L 21715855..21715930 1527..1452 215 85.5 Minus
2L 23513712 2L 22081019..22081097 1531..1453 215 84.8 Minus
3R 31820162 3R 3186348..3186408 1471..1531 215 90.1 Plus
3R 31820162 3R 4047602..4047677 1527..1452 215 85.5 Minus
4 1331231 4 1091149..1091218 1462..1531 215 87.1 Plus
4 1331231 4 233460..233529 1531..1462 215 87.1 Minus
2R 25260384 2R 5475251..5475325 1457..1531 210 85.3 Plus
2R 25260384 2R 2737493..2737543 1473..1523 210 94.1 Plus
2R 25260384 2R 5365150..5365227 1452..1529 210 84.6 Plus
2R 25260384 2R 5353577..5353648 1523..1452 210 86.1 Minus
3L 28103327 3L 22010393..22010509 1452..1568 210 78.6 Plus
3L 28103327 3L 25333682..25333741 1531..1472 210 90 Minus
3L 28103327 3L 24199839..24199898 1531..1472 210 90 Minus
3L 28103327 3L 27164237..27164302 1529..1464 210 87.8 Minus
3L 28103327 3L 24789902..24789979 1529..1452 210 84.6 Minus
3L 28103327 3L 27149640..27149720 1532..1452 210 83.9 Minus
X 23527363 X 22571360..22571419 1472..1531 210 90 Plus
X 23527363 X 11914360..11914419 1464..1523 210 90 Plus
X 23527363 X 138383..138448 1528..1463 210 87.8 Minus
2L 23513712 2L 21583498..21583575 1531..1452 210 86.2 Minus
2L 23513712 2L 116582..116662 1531..1451 210 83.9 Minus
3R 31820162 3R 3374677..3374751 1457..1531 210 85.3 Plus
3R 31820162 3R 5417552..5417626 1531..1457 210 85.3 Minus
3R 31820162 3R 6822451..6822531 1532..1452 210 83.9 Minus
4 1331231 4 914718..914792 1457..1531 210 85.3 Plus
4 1331231 4 870304..870363 1471..1530 210 90 Plus
4 1331231 4 698993..699055 1471..1533 210 88.8 Plus
4 1331231 4 641044..641115 1452..1523 210 86.1 Plus
4 1331231 4 653284..653358 1457..1531 210 85.3 Plus
4 1331231 4 1023800..1023874 1531..1457 210 85.3 Minus
2R 25260384 2R 5001098..5001165 1464..1531 205 86.7 Plus
2R 25260384 2R 25108395..25108450 1474..1529 205 91 Plus
2R 25260384 2R 3097001..3097107 1471..1577 205 79.4 Plus
2R 25260384 2R 5131755..5131834 1531..1452 205 83.7 Minus
3L 28103327 3L 22975847..22975908 1471..1532 205 88.7 Plus
3L 28103327 3L 20048760..20048827 1452..1519 205 86.7 Plus
3L 28103327 3L 18840992..18841059 1464..1531 205 86.7 Plus
3L 28103327 3L 23282553..23282632 1452..1531 205 83.7 Plus
3L 28103327 3L 23318176..23318274 1498..1597 205 82 Plus
3L 28103327 3L 27325550..27325611 1532..1471 205 88.7 Minus
X 23527363 X 15582890..15582960 1452..1522 205 85.9 Plus
X 23527363 X 22501709..22501770 1532..1471 205 88.7 Minus
X 23527363 X 22823159..22823226 1531..1464 205 86.7 Minus
X 23527363 X 1153147..1153226 1531..1452 205 83.7 Minus
X 23527363 X 21300870..21300931 1471..1532 205 88.7 Plus
2L 23513712 2L 22256461..22256540 1452..1531 205 83.7 Plus
2L 23513712 2L 21383596..21383666 1522..1452 205 85.9 Minus
2L 23513712 2L 7232880..7232950 1532..1462 205 85.9 Minus
2L 23513712 2L 21200421..21200500 1531..1452 205 83.7 Minus
2L 23513712 2L 23170139..23170245 1578..1472 205 79.4 Minus
3R 31820162 3R 2350711..2350790 1452..1531 205 83.7 Plus
3R 31820162 3R 2345783..2345862 1452..1531 205 83.7 Plus
3R 31820162 3R 447400..447479 1531..1452 205 83.7 Minus
4 1331231 4 409518..409597 1531..1452 205 83.7 Minus
Unmapped_scaffold_39 40272 Unmapped_scaffold_39 8851..8930 1452..1531 205 83.7 Plus
2R 25260384 2R 5325663..5325729 1457..1523 200 86.5 Plus
2R 25260384 2R 5192137..5192212 1456..1531 200 84.2 Plus
2R 25260384 2R 16153492..16153552 1531..1471 200 88.5 Minus
2R 25260384 2R 5518180..5518240 1531..1471 200 88.5 Minus
2R 25260384 2R 5950485..5950575 1587..1497 200 81.3 Minus
3L 28103327 3L 27352306..27352348 1490..1532 200 97.6 Plus
3L 28103327 3L 26034420..26034480 1471..1531 200 88.5 Plus
3L 28103327 3L 26029832..26029892 1471..1531 200 88.5 Plus
3L 28103327 3L 25925082..25925142 1471..1531 200 88.5 Plus
3L 28103327 3L 28004159..28004225 1464..1530 200 86.5 Plus
3L 28103327 3L 23480715..23480793 1452..1530 200 83.5 Plus
3L 28103327 3L 25992445..25992505 1531..1471 200 88.5 Minus
3L 28103327 3L 9432942..9433002 1531..1471 200 88.5 Minus
X 23527363 X 22774217..22774277 1471..1531 200 88.5 Plus
X 23527363 X 20987587..20987653 1523..1457 200 86.5 Minus
X 23527363 X 22471317..22471440 1575..1452 200 77.4 Minus
2L 23513712 2L 21857208..21857271 1468..1531 200 87.5 Plus
2L 23513712 2L 22193168..22193240 1448..1520 200 84.9 Plus
2L 23513712 2L 21797392..21797470 1530..1452 200 83.5 Minus
3R 31820162 3R 1637618..1637693 1448..1523 200 84.2 Plus
3R 31820162 3R 3987098..3987164 1518..1452 200 86.5 Minus
4 1331231 4 361941..362001 1471..1531 200 88.5 Plus
4 1331231 4 815021..815096 1523..1448 200 84.2 Minus
2R 25260384 2R 2732848..2732898 1473..1523 195 92.1 Plus
2R 25260384 2R 2954319..2954393 1531..1457 195 84 Minus
2R 25260384 2R 5479906..5479985 1531..1457 195 85 Minus
2R 25260384 2R 5151273..5151353 1532..1452 195 82.7 Minus
3L 28103327 3L 27331065..27331115 1596..1546 195 92.1 Minus
X 23527363 X 21419464..21419523 1472..1531 195 88.3 Plus
X 23527363 X 7023177..7023236 1472..1531 195 88.3 Plus
X 23527363 X 21491047..21491124 1529..1452 195 83.3 Minus
X 23527363 X 1154317..1154376 1531..1472 195 88.3 Minus
2L 23513712 2L 3463003..3463077 1452..1526 195 84 Plus
2L 23513712 2L 22995368..22995448 1452..1532 195 82.7 Plus
2L 23513712 2L 21922973..21923053 1532..1452 195 82.7 Minus
3R 31820162 3R 3525224..3525298 1457..1531 195 84 Plus
3R 31820162 3R 2211852..2211953 1472..1573 195 79.4 Plus
4 1331231 4 1114802..1114861 1472..1531 195 88.3 Plus
4 1331231 4 103516..103584 1463..1531 195 85.5 Plus
4 1331231 4 1079469..1079519 1522..1472 195 92.1 Minus
4 1331231 4 235287..235343 1528..1472 195 89.4 Minus
4 1331231 4 520395..520463 1520..1452 195 85.5 Minus
Unimproved_211000022278098_2_2788 2786 Unimproved_211000022278098_2_2788 1622..1702 1532..1452 195 82.7 Minus
2R 25260384 2R 578560..578639 1452..1531 190 82.5 Plus
2R 25260384 2R 3073288..3073397 1457..1566 190 78.1 Plus
3L 28103327 3L 23179807..23179880 1458..1531 190 83.7 Plus
3L 28103327 3L 24359489..24359568 1531..1452 190 82.5 Minus
3L 28103327 3L 23262357..23262424 1464..1531 190 85.2 Plus
3L 28103327 3L 23224501..23224568 1464..1531 190 85.2 Plus
X 23527363 X 19308873..19308925 1479..1531 190 90.5 Plus
X 23527363 X 132339..132397 1471..1529 190 88.1 Plus
X 23527363 X 22585189..22585256 1464..1531 190 85.2 Plus
X 23527363 X 18851331..18851401 1452..1522 190 84.5 Plus
X 23527363 X 314899..314969 1462..1532 190 84.5 Plus
X 23527363 X 19968931..19969010 1452..1531 190 82.5 Plus
X 23527363 X 22469870..22469934 1522..1458 190 86.1 Minus
X 23527363 X 22698402..22698481 1531..1452 190 82.5 Minus
X 23527363 X 20243817..20243896 1530..1451 190 82.5 Minus
2L 23513712 2L 17973694..17973746 1523..1471 190 90.5 Minus
2L 23513712 2L 21343634..21343713 1531..1452 190 82.5 Minus
3R 31820162 3R 691501..691580 1452..1531 190 82.5 Plus
3R 31820162 3R 1654909..1654985 1529..1453 190 83.1 Minus
3L 28103327 3L 22995907..22995982 1448..1523 185 82.8 Plus
X 23527363 X 23009194..23009257 1515..1452 185 85.9 Minus
3L 28103327 3L 24560164..24560226 1452..1514 180 85.7 Plus
2L 23513712 2L 22062670..22062744 1457..1531 180 82.6 Plus
3R 31820162 3R 31713027..31713070 1488..1531 175 93.1 Plus
3L 28103327 3L 23319535..23319577 1489..1531 170 93 Plus
3L 28103327 3L 22716735..22716782 1546..1593 165 89.5 Plus
3L 28103327 3L 9439717..9439770 1462..1515 165 87 Plus
X 23527363 X 23009132..23009182 1596..1546 165 88.2 Minus
2L 23513712 2L 22691342..22691401 1546..1605 165 85 Plus
3R 31820162 3R 31805522..31805572 1546..1596 165 88.2 Plus
3R 31820162 3R 4075263..4075322 1531..1472 165 85 Minus
3L 28103327 3L 164094..164149 1532..1477 160 85.7 Minus
3L 28103327 3L 24718450..24718517 1531..1464 160 82.3 Minus
2L 23513712 2L 21621342..21621376 1497..1531 160 97.1 Plus
2L 23513712 2L 21622662..21622705 1488..1531 160 90.9 Plus
2L 23513712 2L 21726533..21726582 1547..1596 160 88 Plus
2L 23513712 2L 21711694..21711731 1531..1494 160 94.7 Minus
3L 28103327 3L 22995994..22996051 1539..1596 155 84.4 Plus
X 23527363 X 20987507..20987564 1603..1546 155 84.4 Minus
2L 23513712 2L 22686424..22686472 1463..1511 155 87.7 Plus
2L 23513712 2L 22326041..22326101 1533..1471 155 85.7 Minus
3R 31820162 3R 2350805..2350856 1546..1597 155 86.5 Plus
3R 31820162 3R 2345877..2345928 1546..1597 155 86.5 Plus
4 1331231 4 1185217..1185256 1471..1510 155 92.5 Plus
3L 28103327 3L 24560257..24560307 1546..1596 150 86.2 Plus
3L 28103327 3L 23327246..23327293 1546..1593 150 87.5 Plus
3L 28103327 3L 9439786..9439833 1546..1593 150 87.5 Plus
X 23527363 X 163523..163570 1593..1546 150 87.5 Minus
X 23527363 X 163587..163664 1529..1452 150 79.4 Minus
2L 23513712 2L 22068083..22068130 1546..1593 150 87.5 Plus
2L 23513712 2L 21857286..21857333 1546..1593 150 87.5 Plus
2L 23513712 2L 21622720..21622770 1546..1596 150 86.2 Plus
2L 23513712 2L 21711632..21711679 1593..1546 150 87.5 Minus
4 1331231 4 914807..914857 1546..1596 150 86.2 Plus
4 1331231 4 362016..362066 1546..1596 150 86.2 Plus
4 1331231 4 630865..630915 1596..1546 150 86.2 Minus
X 23527363 X 21490981..21491030 1595..1546 145 86 Minus
2L 23513712 2L 21726476..21726531 1462..1517 145 83.9 Plus
3R 31820162 3R 4075209..4075258 1594..1545 145 86 Minus
4 1331231 4 631078..631106 1523..1495 145 100 Minus
2L 23513712 2L 22325984..22326032 1594..1546 140 85.7 Minus
3R 31820162 3R 31713088..31713136 1546..1594 140 85.7 Plus
4 1331231 4 1185172..1185205 1378..1411 140 94.1 Plus
Blast to na_te.dros performed 2019-03-15 14:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
INE-1 611 INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). 10..217 1562..1349 371 68 Minus
Dsub\SGM 823 Dsub\SGM SGM 823bp Derived from AF043638. 1..241 1595..1365 361 65.4 Minus
Dfun\Isfun-1 928 Dfun\Isfun-1 DFU309320 928bp Derived from AJ309320 (Rel. 68, Last updated, Version 1). 10..232 1573..1367 314 64.3 Minus
Dbuz\ISBu2 726 Dbuz\ISBu2 ISBU2 726bp 31..398 1568..1188 307 58.1 Minus
Dpse\mini-me 4622 Dpse\mini-me DPSEMINIME 4622bp 1..178 1593..1430 307 69.1 Minus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 1299..1437 1430..1568 298 70 Plus
Dsub\GEM 1730 Dsub\GEM GEM 1730bp 984..1145 1448..1601 276 68.7 Plus
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 3010..3150 1395..1529 259 67.4 Plus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 3933..4042 1435..1548 218 69.6 Plus

RH07111.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:34:15 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5591845..5592268 1..424 99 -> Plus
chr2R 5592333..5592526 425..618 100 -> Plus
chr2R 5592599..5593340 619..1360 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:39:59 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RA 1..612 405..1016 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:07:34 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RB 1..288 25..312 100 == Plus
CG30002-RB 289..936 366..1016 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:34:02 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RB 1..288 25..312 100 == Plus
CG30002-RB 289..936 366..1016 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:57:19 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RA 1..612 405..1016 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:02:13 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RB 1..288 25..312 100 == Plus
CG30002-RB 289..936 366..1016 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:27:36 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RA 2..1629 2..1629 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:07:34 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RA 2..1629 2..1629 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:34:02 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RB 1..311 2..312 100 == Plus
CG30002-RB 312..1572 366..1629 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:57:20 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RA 2..1629 2..1629 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:02:13 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
CG30002-RB 1..311 2..312 100 == Plus
CG30002-RB 312..1572 366..1629 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:15 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9704383..9704806 1..424 99 -> Plus
2R 9704871..9705064 425..618 100 -> Plus
2R 9705137..9706147 619..1629 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:15 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9704383..9704806 1..424 99 -> Plus
2R 9704871..9705064 425..618 100 -> Plus
2R 9705137..9706147 619..1629 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:34:15 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9704383..9704806 1..424 99 -> Plus
2R 9704871..9705064 425..618 100 -> Plus
2R 9705137..9706147 619..1629 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:34:02 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5591888..5592311 1..424 99 -> Plus
arm_2R 5592376..5592569 425..618 100 -> Plus
arm_2R 5592642..5593652 619..1629 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:29:54 Download gff for RH07111.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9705582..9706005 1..424 99 -> Plus
2R 9706070..9706263 425..618 100 -> Plus
2R 9706336..9707346 619..1629 100   Plus

RH07111.pep Sequence

Translation from 404 to 1015

> RH07111.pep
MCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEF
NLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVG
WGKTESLRYANSTMEVDIRTEKCTDGRDTSFLCASGDYVDTCNGDSGGPL
LWKTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWILEKMAEF
SDV*

RH07111.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23281-PA 372 GF23281-PA 169..368 7..198 319 36 Plus
Dana\GF12631-PA 271 GF12631-PA 70..270 2..199 315 36.1 Plus
Dana\GF15010-PA 628 GF15010-PA 423..619 2..193 311 36.4 Plus
Dana\GF23282-PA 376 GF23282-PA 177..375 8..197 244 29.4 Plus
Dana\GF16252-PA 399 GF16252-PA 196..397 10..197 244 31.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24097-PA 312 GG24097-PA 112..311 3..202 838 75.5 Plus
Dere\GG20545-PA 371 GG20545-PA 173..369 10..197 324 34.5 Plus
Dere\GG11531-PA 377 GG11531-PA 174..373 7..198 318 37.4 Plus
Dere\GG20543-PA 280 GG20543-PA 88..275 7..197 284 35.7 Plus
Dere\GG11533-PA 385 GG11533-PA 181..384 4..197 283 33.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20292-PA 242 GH20292-PA 44..239 8..197 329 37.3 Plus
Dgri\GH20291-PA 237 GH20291-PA 39..234 8..197 324 36.8 Plus
Dgri\GH20624-PA 374 GH20624-PA 170..370 7..199 307 36.8 Plus
Dgri\GH17524-PA 374 GH17524-PA 170..370 7..199 307 36.8 Plus
Dgri\GH23917-PA 235 GH23917-PA 55..232 8..197 270 34.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30002-PB 311 CG30002-PB 109..311 1..203 1105 100 Plus
CG1773-PA 317 CG1773-PA 109..310 1..202 1000 90.1 Plus
grass-PA 335 CG5896-PA 132..331 7..198 307 37.4 Plus
grass-PB 377 CG5896-PB 174..373 7..198 307 37.4 Plus
CG5909-PA 381 CG5909-PA 183..380 8..197 286 34.5 Plus
CG30090-PA 291 CG30090-PA 88..273 8..193 261 37.6 Plus
CG30289-PA 316 CG30289-PA 81..278 2..200 261 31.1 Plus
SPE-PA 400 CG16705-PA 198..398 10..197 260 34.5 Plus
CG30088-PB 281 CG30088-PB 91..272 8..193 243 35.2 Plus
CG30288-PC 282 CG30288-PC 84..279 2..202 242 33.7 Plus
CG30087-PA 277 CG30087-PA 88..274 8..197 238 33.5 Plus
CG33225-PB 292 CG33225-PB 83..275 2..194 238 36.8 Plus
CG33225-PC 307 CG33225-PC 98..290 2..194 238 36.8 Plus
CG43742-PB 474 CG43742-PB 90..259 30..199 237 36.4 Plus
MP1-PA 390 CG1102-PA 187..384 10..193 236 34 Plus
MP1-PC 399 CG1102-PC 196..393 10..193 236 34 Plus
MP1-PE 400 CG1102-PE 197..394 10..193 236 34 Plus
Sp7-PF 391 CG3066-PF 198..387 10..195 232 33.8 Plus
Sp7-PE 391 CG3066-PE 198..387 10..195 232 33.8 Plus
Sp7-PA 391 CG3066-PA 198..387 10..195 232 33.8 Plus
CG9737-PA 424 CG9737-PA 207..406 10..193 230 35.3 Plus
ea-PB 261 CG4920-PB 58..255 10..193 224 33.7 Plus
CG30414-PC 305 CG30414-PC 107..298 3..201 224 31.4 Plus
CG30414-PB 305 CG30414-PB 107..298 3..201 224 31.4 Plus
ea-PA 392 CG4920-PA 189..386 10..193 224 33.7 Plus
CG30082-PB 280 CR30082-PB 88..272 8..194 222 36.2 Plus
CG43335-PA 281 CG43335-PA 87..272 5..193 222 32.1 Plus
CG43110-PA 483 CG43110-PA 95..254 35..193 215 34.1 Plus
CG43110-PB 483 CG43110-PB 95..254 35..193 215 34.1 Plus
CG30286-PB 277 CG30286-PB 76..273 2..198 214 31.4 Plus
CG10232-PD 509 CG10232-PD 319..503 9..193 212 33.5 Plus
CG30283-PB 273 CG30283-PB 84..264 2..194 210 29.4 Plus
CG11313-PD 370 CG11313-PD 176..368 5..197 210 33.5 Plus
CG30091-PA 526 CG30091-PA 110..273 35..193 210 36.1 Plus
CG11313-PC 367 CG11313-PC 176..365 8..197 209 33.5 Plus
Ser7-PA 397 CG2045-PA 191..388 12..193 209 34.2 Plus
CG30287-PA 284 CG30287-PA 90..277 7..193 200 29.7 Plus
CG30098-PA 264 CG30098-PA 85..259 10..197 198 31.2 Plus
CG33226-PC 292 CG33226-PC 115..290 32..201 195 33.3 Plus
CG16710-PB 372 CG16710-PB 167..366 9..197 195 29.2 Plus
CG31219-PB 345 CG31219-PB 141..339 3..193 193 31 Plus
CG13744-PA 389 CG13744-PA 190..385 7..198 192 33.6 Plus
CG43336-PA 279 CG43336-PA 86..272 7..194 191 29.7 Plus
CG18636-PA 349 CG18636-PA 98..279 12..194 190 30.7 Plus
CG8172-PG 192 CG8172-PG 20..188 37..198 189 35.2 Plus
CG33462-PA 300 CG33462-PA 84..276 8..200 185 29.1 Plus
CG11842-PA 319 CG11842-PA 132..318 12..199 184 29.2 Plus
Sb-PB 787 CG4316-PB 599..784 7..195 182 29.9 Plus
Sb-PA 787 CG4316-PA 599..784 7..195 182 29.9 Plus
CG30083-PB 279 CG30083-PB 100..256 39..194 176 31.3 Plus
CG40160-PH 421 CG40160-PH 234..409 35..197 176 31.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23202-PA 376 GI23202-PA 173..373 7..199 299 35.3 Plus
Dmoj\GI22268-PA 380 GI22268-PA 177..379 5..197 288 34.1 Plus
Dmoj\GI22780-PA 412 GI22780-PA 208..410 10..197 264 33.8 Plus
Dmoj\GI10853-PA 285 GI10853-PA 82..279 10..193 243 34 Plus
Dmoj\GI15987-PA 407 GI15987-PA 194..401 12..203 235 34 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:00:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10195-PA 357 GL10195-PA 154..357 4..199 334 40.2 Plus
Dper\GL11854-PA 352 GL11854-PA 152..350 8..198 332 39.3 Plus
Dper\GL23905-PA 374 GL23905-PA 171..370 7..198 325 37.9 Plus
Dper\GL11766-PA 376 GL11766-PA 169..376 8..199 309 37.3 Plus
Dper\GL23906-PA 390 GL23906-PA 191..389 10..197 288 36.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24114-PA 361 GA24114-PA 162..361 8..199 333 41 Plus
Dpse\GA25144-PB 366 GA25144-PB 166..364 8..198 332 39.3 Plus
Dpse\GA19211-PB 335 GA19211-PB 132..331 7..198 321 37.4 Plus
Dpse\GA19211-PA 374 GA19211-PA 171..370 7..198 321 37.4 Plus
Dpse\GA24065-PA 376 GA24065-PA 169..376 8..199 318 37.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21145-PA 311 GM21145-PA 109..311 1..203 966 86.7 Plus
Dsec\GM21144-PA 236 GM21144-PA 55..191 5..140 580 79.6 Plus
Dsec\GM21637-PA 306 GM21637-PA 101..304 2..197 327 35.3 Plus
Dsec\GM10373-PA 377 GM10373-PA 174..373 7..198 322 36.9 Plus
Dsec\GM10374-PA 385 GM10374-PA 185..384 8..197 286 34.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10675-PA 311 GD10675-PA 109..311 1..203 979 88.2 Plus
Dsim\GD10676-PA 311 GD10676-PA 109..311 1..203 975 87.2 Plus
Dsim\GD15186-PA 419 GD15186-PA 216..415 7..198 321 37.4 Plus
Dsim\GD11133-PA 295 GD11133-PA 88..283 8..203 267 36 Plus
Dsim\GD15187-PA 367 GD15187-PA 185..366 8..197 265 33.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21214-PA 280 GJ21214-PA 75..277 2..197 369 43.4 Plus
Dvir\GJ21212-PA 268 GJ21212-PA 66..265 4..197 358 39.5 Plus
Dvir\GJ21978-PA 296 GJ21978-PA 93..288 4..193 332 36.3 Plus
Dvir\GJ22863-PA 372 GJ22863-PA 169..368 7..198 320 38.4 Plus
Dvir\GJ22783-PA 401 GJ22783-PA 197..399 10..197 259 35.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:01:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18214-PA 163 GK18214-PA 1..162 37..198 322 39.3 Plus
Dwil\GK11884-PA 375 GK11884-PA 172..371 9..198 315 35.8 Plus
Dwil\GK11885-PA 388 GK11885-PA 185..387 5..197 277 35.4 Plus
Dwil\GK25542-PA 285 GK25542-PA 53..269 5..203 247 30.3 Plus
Dwil\GK23933-PA 280 GK23933-PA 63..253 9..193 239 32 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19296-PA 323 GE19296-PA 109..311 1..203 946 83.7 Plus
Dyak\GE11731-PA 371 GE11731-PA 173..369 10..197 329 35.5 Plus
Dyak\GE23721-PA 377 GE23721-PA 174..373 7..198 319 36.9 Plus
Dyak\GE11725-PA 296 GE11725-PA 85..280 8..203 282 36.9 Plus
Dyak\GE23722-PA 386 GE23722-PA 188..385 10..197 282 34.5 Plus

RH07111.hyp Sequence

Translation from 404 to 1015

> RH07111.hyp
MCPRSKEIRVWLGELDLSSTSDCTTYNYERVCAPPVEEFTIDKWILHEEF
NLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQRFMAVG
WGKTESLRYANSTMEVDIRTEKCTDGRDTSFLCASGDYVDTCNGDSGGPL
LWKTTLFGKDRAVQFGVVSTGSQNCGAGHKAYYMDVPTYMPWILEKMAEF
SDV*

RH07111.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG30002-PB 311 CG30002-PB 109..311 1..203 1105 100 Plus
CG1773-PA 317 CG1773-PA 109..310 1..202 1000 90.1 Plus
grass-PA 335 CG5896-PA 132..331 7..198 307 37.4 Plus
grass-PB 377 CG5896-PB 174..373 7..198 307 37.4 Plus
CG5909-PA 381 CG5909-PA 183..380 8..197 286 34.5 Plus