BDGP Sequence Production Resources |
Search the DGRC for RH08259
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 82 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8736-RB |
Protein status: | RH08259.pep: gold |
Preliminary Size: | 645 |
Sequenced Size: | 782 |
Gene | Date | Evidence |
---|---|---|
CG8736 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8736 | 2002-04-21 | Blastp of sequenced clone |
CG8736 | 2008-04-29 | Release 5.5 accounting |
CG8736 | 2008-08-15 | Release 5.9 accounting |
CG8736 | 2008-12-18 | 5.12 accounting |
782 bp (782 high quality bases) assembled on 2002-04-21
GenBank Submission: AY113559
> RH08259.complete ACCAGAGCAGTGCAGCGCCGACCAGGAACCCAATTGGAAGTTTGAGCTAC GACTCCATAGTCCAATTCGGCAAGGATTACCATAAGCCCCACACCAGAAC CAACTCCACAACTACCAACCACCCACTCACCTCAGCCAACATGTTCTGCA AGCTGCTTTTCGCTACCTTCGTGGCCCTGGCGGTGGCCAAGCCACAACAC CAACCTGCTGCCCAGTATCCGGCTGGCGTGAATCCGCAGGACTGCCCCAA CTTCCCCATCTGTGATAATGCGCGCCTGCACAATCCGCAGCCGCAGTGGG GTGCCCCGCAGCCACAGTGGAACCCCCAGCCGCAGCCACAGTGGAACCCG CAGCCACAGTGGCAGCAACCTCAACCCCAGTGGAACCCCCAGCCGCAGCC ACAGTGGCAGGCACAGCCCTCGTGGAACGCAGCCCCTGCTGCCGCACCCG GTGGCGATAAGTATCCAGCTGGCGTCAATCCGCAGACCTGCCCCAACTAT CCCTACTGCGACGTGAACGCCGGACACGCTGGTGCTCCCGTGGCAGCTCC TCCTCTACCTGGCTGGACGGAGCGTCTGTATCCCGCCGGAGTTTCGCCGC ACCAGTGCCCCAACTTCCCGTACTGCAACTAGGGCGGCCTAGGGCTCACT TGCGGCCAGCCGCAGCTTCCTTTAACGCTTCGCCTTTCCCCAGTTCTCAA TTAGTGGACATTAATCTGAAATTCTTTGTTGTTGGCGCCGAAATAAATGC AAAATGTTGGTCAAAGAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4481617..4481963 | 420..766 | 99 | == | Minus |
chr2R | 4482060..4482227 | 156..323 | 100 | <- | Minus |
chr2R | 4482442..4482594 | 1..155 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..492 | 141..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..492 | 141..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..492 | 141..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..492 | 141..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..492 | 141..632 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..764 | 4..766 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..764 | 4..766 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..764 | 4..766 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..764 | 4..766 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8736-RB | 1..764 | 4..766 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8594031..8594641 | 156..766 | 100 | <- | Minus |
2R | 8594849..8595001 | 1..155 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8594031..8594641 | 156..766 | 100 | <- | Minus |
2R | 8594849..8595001 | 1..155 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8594031..8594641 | 156..766 | 100 | <- | Minus |
2R | 8594849..8595001 | 1..155 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4481536..4482146 | 156..766 | 100 | <- | Minus |
arm_2R | 4482354..4482506 | 1..155 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8595230..8595840 | 156..766 | 100 | <- | Minus |
2R | 8596048..8596200 | 1..155 | 98 | Minus |
Translation from 0 to 631
> RH08259.hyp SSSAAPTRNPIGSLSYDSIVQFGKDYHKPHTRTNSTTTNHPLTSANMFCK LLFATFVALAVAKPQHQPAAQYPAGVNPQDCPNFPICDNARLHNPQPQWG APQPQWNPQPQPQWNPQPQWQQPQPQWNPQPQPQWQAQPSWNAAPAAAPG GDKYPAGVNPQTCPNYPYCDVNAGHAGAPVAAPPLPGWTERLYPAGVSPH QCPNFPYCN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8736-PB | 163 | CG8736-PB | 1..163 | 47..209 | 978 | 100 | Plus |
Translation from 2 to 631
> RH08259.pep QSSAAPTRNPIGSLSYDSIVQFGKDYHKPHTRTNSTTTNHPLTSANMFCK LLFATFVALAVAKPQHQPAAQYPAGVNPQDCPNFPICDNARLHNPQPQWG APQPQWNPQPQPQWNPQPQWQQPQPQWNPQPQPQWQAQPSWNAAPAAAPG GDKYPAGVNPQTCPNYPYCDVNAGHAGAPVAAPPLPGWTERLYPAGVSPH QCPNFPYCN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12575-PA | 162 | GF12575-PA | 1..162 | 47..209 | 527 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10631-PA | 165 | GG10631-PA | 1..165 | 47..209 | 789 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22145-PA | 163 | GH22145-PA | 1..163 | 47..209 | 452 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8736-PB | 163 | CG8736-PB | 1..163 | 47..209 | 978 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19375-PA | 162 | GI19375-PA | 1..48 | 47..94 | 203 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11020-PA | 168 | GL11020-PA | 1..168 | 47..209 | 506 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24576-PA | 168 | GA24576-PA | 1..168 | 47..209 | 506 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20677-PA | 214 | GM20677-PA | 7..214 | 2..209 | 1044 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10155-PA | 214 | GD10155-PA | 7..214 | 2..209 | 1050 | 99.5 | Plus |
Dsim\GD15271-PA | 163 | GD15271-PA | 1..163 | 47..209 | 807 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19933-PA | 163 | GJ19933-PA | 1..163 | 47..209 | 321 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23212-PA | 163 | GK23212-PA | 1..162 | 47..208 | 486 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22901-PA | 163 | GE22901-PA | 1..163 | 47..209 | 807 | 99.4 | Plus |