BDGP Sequence Production Resources |
Search the DGRC for RH08789
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 87 |
Well: | 89 |
Vector: | pFlc-1 |
Associated Gene/Transcript | ssp7-RA |
Protein status: | RH08789.pep: gold |
Sequenced Size: | 384 |
Gene | Date | Evidence |
---|---|---|
CG32667 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32667 | 2004-01-31 | Blastp of sequenced clone |
CG32667 | 2008-04-29 | Release 5.5 accounting |
CG32667 | 2008-08-15 | Release 5.9 accounting |
CG32667 | 2008-12-18 | 5.12 accounting |
384 bp (384 high quality bases) assembled on 2004-01-31
GenBank Submission: BT011525
> RH08789.complete GATCAGTTAGCTACATAATATGAAATCGGTCACGTTCGTACTCTGCCTGC TCGTTCTGGGCGCCCACTCGCTGCTGGTGTTCGCCGTGGATTGCGAGATC GGTGGGCATCAGTTCAAGACCGGAGAGAAGTACACGCCGGAAGGTCGCTG CCTGCAGTACACCTGCCAGGCACCCAAACAGGTGACTGCCTTGGGATGCC CGGCCATCGCCTCCTTGAAGCCCTGCAAAATGGAAGAGGATCTGAGCAAA CCCTATCCCGGCTGCTGTCCCAAGTTCAACTGCTGACAACGCCTCCCTCG CAAGTCGAACTGCAAATGTGAAATGAACTATGAAAACTGAATATATAACT ATAGAAACATACATACCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32667-RA | 377 | CG32667-RA | 5..376 | 1..372 | 1845 | 99.7 | Plus |
nc_23059.a | 2366 | nc_23059.a | 1881..1997 | 311..195 | 585 | 100 | Minus |
nc_23059.a | 2366 | nc_23059.a | 2017..2118 | 187..86 | 510 | 100 | Minus |
nc_23059.a | 2366 | nc_23059.a | 2186..2271 | 86..1 | 430 | 100 | Minus |
CG15202.b | 707 | CG15202.b | 1..44 | 238..195 | 220 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11031020..11031193 | 368..195 | 840 | 98.9 | Minus |
chrX | 22417052 | chrX | 11031259..11031368 | 195..86 | 535 | 99.1 | Minus |
chrX | 22417052 | chrX | 11031436..11031521 | 86..1 | 415 | 98.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11031020..11031192 | 196..368 | 98 | <- | Minus |
chrX | 11031259..11031367 | 87..195 | 99 | <- | Minus |
chrX | 11031436..11031521 | 1..86 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..267 | 20..286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..267 | 20..286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..267 | 20..286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..267 | 20..286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp7-RA | 1..267 | 20..286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..368 | 1..368 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..368 | 1..368 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..368 | 1..368 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32667-RA | 1..368 | 1..368 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ssp7-RA | 1..368 | 1..368 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11139762..11139934 | 196..368 | 100 | <- | Minus |
X | 11140001..11140109 | 87..195 | 100 | <- | Minus |
X | 11140178..11140263 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11139762..11139934 | 196..368 | 100 | <- | Minus |
X | 11140001..11140109 | 87..195 | 100 | <- | Minus |
X | 11140178..11140263 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11139762..11139934 | 196..368 | 100 | <- | Minus |
X | 11140001..11140109 | 87..195 | 100 | <- | Minus |
X | 11140178..11140263 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11033795..11033967 | 196..368 | 100 | <- | Minus |
arm_X | 11034034..11034142 | 87..195 | 100 | <- | Minus |
arm_X | 11034211..11034296 | 1..86 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11147860..11148032 | 196..368 | 100 | <- | Minus |
X | 11148099..11148207 | 87..195 | 100 | <- | Minus |
X | 11148276..11148361 | 1..86 | 100 | Minus |
Translation from 19 to 285
> RH08789.hyp MKSVTFVLCLLVLGAHSLLVFAVDCEIGGHQFKTGEKYTPEGRCLQYTCQ APKQVTALGCPAIASLKPCKMEEDLSKPYPGCCPKFNC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ssp7-PA | 88 | CG32667-PA | 1..88 | 1..88 | 488 | 100 | Plus |
Translation from 19 to 285
> RH08789.pep MKSVTFVLCLLVLGAHSLLVFAVDCEIGGHQFKTGEKYTPEGRCLQYTCQ APKQVTALGCPAIASLKPCKMEEDLSKPYPGCCPKFNC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20393-PA | 89 | GF20393-PA | 1..89 | 1..88 | 295 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18878-PA | 88 | GG18878-PA | 1..88 | 1..88 | 412 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24575-PA | 94 | GH24575-PA | 1..87 | 1..88 | 257 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ssp7-PA | 88 | CG32667-PA | 1..88 | 1..88 | 488 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15280-PA | 94 | GI15280-PA | 1..87 | 1..88 | 249 | 53.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20257-PA | 90 | GL20257-PA | 1..90 | 1..88 | 230 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26998-PA | 90 | GA26998-PA | 1..90 | 1..88 | 216 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11263-PA | 88 | GM11263-PA | 1..88 | 1..88 | 443 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16000-PA | 88 | GD16000-PA | 1..88 | 1..88 | 447 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16933-PA | 93 | GJ16933-PA | 1..87 | 1..88 | 253 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17235-PA | 88 | GK17235-PA | 1..88 | 1..88 | 316 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17318-PA | 88 | GE17318-PA | 1..88 | 1..88 | 388 | 81.8 | Plus |