BDGP Sequence Production Resources |
Search the DGRC for RH08992
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 89 |
Well: | 92 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15916-RA |
Protein status: | RH08992.pep: gold |
Preliminary Size: | 531 |
Sequenced Size: | 965 |
Gene | Date | Evidence |
---|---|---|
CG15916 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15916 | 2002-01-09 | Blastp of sequenced clone |
CG15916 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15916 | 2008-04-29 | Release 5.5 accounting |
CG15916 | 2008-08-15 | Release 5.9 accounting |
CG15916 | 2008-12-18 | 5.12 accounting |
965 bp (965 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075537
> RH08992.complete GATTCCACATTATATTTTGTATTGCATTCTATTTTATCTAAGCTAGCAAA TATATTTAAGGCAACTAGACTAAATGTTAAGCATTCGTGTTTTAAGGCTA CAAAATGGACACTCCGTTCTTAACAACGCCTGCCAATTGGCACTTTCGCG AAACAAGAGCTCCAAAAGGTCGAGCAAAGACAACGTAACGCGACAGGGAA AAATATTTGGCTCGTTGTTTGGAAATCGGCTTAAAGGCAGCAAAAGCCAT TGGTATCCATCGCCCGATGCAGGAACATCAGGCAATCAAAAGTCGCTGCA CGCCTTAAAGTTTGGAACCCCACACTCGAAGACAACTTGCAGCCACAACA ATCGACGCATGTCTGTTCTGAACAAGTTGTTCATGACGAACATCACTGAT ATTCTGGCCACCGGCGCAGTTGCCGATTCCATCGTGGGACACGGAGTGCA GATTTCCTATGTCAAGATCACCAGCGACTTCTCCCGCATCAATGTCTATT GGATGGGCAAGGATGGCGGGGAGAACCAAGAGCTCGAGAACACATTGAAT CGCATGAGCGGCAAACTGCAGCACGAGCTATCGCAGCTCCATCTGATGGG CGAAGTGCCAAAGATCAAGTTTGTCCGGGACAAAACGAGCACTGGTCTCC ATCAGGTCCACGAGGTTCTGTCCAAAATCGATCTTCAGCACAGTTACTCT AGTTCAAATGCGGAAGTTGAAGAAAGCGACGCACAGAGTTGTCAGACGGC TGCGGATGAGGAATGGCCGGAGATGCGACAGGATTTCCTCAGTTTTAACC ATAGCTTAGTTATGGACAAGATTCTCGGCAAGATGCGCAAGTCCAAAGAT GCCTGGGTTAATCATAGACAAAATATTGCGAAAACCTAACGTTTGTTAAA TCCCTCGACTTATGTACATAATGTTAATTATTAAAGTGTTATTCAATCCA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15916-RA | 949 | CG15916-RA | 2..949 | 2..949 | 4740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15780456..15781403 | 2..949 | 4740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15890600..15891549 | 2..951 | 4750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15898698..15899647 | 2..951 | 4750 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 35..102 | 20..83 | 123 | 71 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15780455..15781403 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 1..816 | 74..889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 1..816 | 74..889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 1..816 | 74..889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 1..816 | 74..889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 1..816 | 74..889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 2..949 | 2..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 2..949 | 2..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 11..959 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 2..949 | 2..949 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15916-RA | 11..959 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15890599..15891547 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15890599..15891547 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15890599..15891547 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15784632..15785580 | 1..949 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15898697..15899645 | 1..949 | 99 | Plus |
Translation from 73 to 888
> RH08992.pep MLSIRVLRLQNGHSVLNNACQLALSRNKSSKRSSKDNVTRQGKIFGSLFG NRLKGSKSHWYPSPDAGTSGNQKSLHALKFGTPHSKTTCSHNNRRMSVLN KLFMTNITDILATGAVADSIVGHGVQISYVKITSDFSRINVYWMGKDGGE NQELENTLNRMSGKLQHELSQLHLMGEVPKIKFVRDKTSTGLHQVHEVLS KIDLQHSYSSSNAEVEESDAQSCQTAADEEWPEMRQDFLSFNHSLVMDKI LGKMRKSKDAWVNHRQNIAKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10091-PA | 287 | GF10091-PA | 1..275 | 1..271 | 654 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17927-PA | 177 | GG17927-PA | 1..177 | 96..271 | 856 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24894-PA | 410 | GH24894-PA | 44..304 | 37..261 | 464 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15916-PA | 271 | CG15916-PA | 1..271 | 1..271 | 1407 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14290-PA | 377 | GI14290-PA | 16..286 | 22..266 | 527 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14024-PA | 270 | GA14024-PA | 1..269 | 1..266 | 553 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22594-PA | 271 | GM22594-PA | 1..271 | 1..271 | 1349 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24682-PA | 271 | GD24682-PA | 1..271 | 1..271 | 1341 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19347-PA | 396 | GJ19347-PA | 1..294 | 1..266 | 581 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25240-PA | 377 | GK25240-PA | 32..277 | 37..264 | 554 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17234-PA | 176 | GE17234-PA | 1..176 | 96..271 | 863 | 92.6 | Plus |
Translation from 73 to 888
> RH08992.hyp MLSIRVLRLQNGHSVLNNACQLALSRNKSSKRSSKDNVTRQGKIFGSLFG NRLKGSKSHWYPSPDAGTSGNQKSLHALKFGTPHSKTTCSHNNRRMSVLN KLFMTNITDILATGAVADSIVGHGVQISYVKITSDFSRINVYWMGKDGGE NQELENTLNRMSGKLQHELSQLHLMGEVPKIKFVRDKTSTGLHQVHEVLS KIDLQHSYSSSNAEVEESDAQSCQTAADEEWPEMRQDFLSFNHSLVMDKI LGKMRKSKDAWVNHRQNIAKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15916-PA | 271 | CG15916-PA | 1..271 | 1..271 | 1407 | 100 | Plus |