BDGP Sequence Production Resources |
Search the DGRC for RH09039
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 90 |
Well: | 39 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14591-RA |
Protein status: | RH09039.pep: gold |
Preliminary Size: | 999 |
Sequenced Size: | 1743 |
Gene | Date | Evidence |
---|---|---|
CG14591 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14591 | 2002-01-09 | Blastp of sequenced clone |
CG14591 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14591 | 2008-04-29 | Release 5.5 accounting |
CG14591 | 2008-08-15 | Release 5.9 accounting |
CG14591 | 2008-12-18 | 5.12 accounting |
1743 bp (1743 high quality bases) assembled on 2002-01-09
GenBank Submission: AY075538
> RH09039.complete GAGTCGCTTGCAGACAGTCGCTCAGTGAGAACGTCGCGTTTTTTCGCCAC CCTTCTTCTTTTCGACCAGCGAATTGCATGCTTAATGCAGACATGCAGTC GAAATGTAATTAAAAATAAAAAAGGAACAAAGAATGTGCGATGTTCGCGG GATTTGCTTAATAGCATAAAAAATCCATCGGTGAATCTAGGGGTATCTAA AGAAGCTTCGGACCAGAACACGTGGCAGTTTCAGGCGGAAGACTTATAGC CTTAAAATGGGATGGGACTGGGCGGTCGGAGGTATATCCGATGAGATTCC GAGGACAACGGGACCAGAATGCATCAACTACATGACAGATCGACGTCGCT GGTTGGAGACGATACTACTGTCCGCCCTCTTCATCTTTATAATGCACCGC TCCTGGCAACGCCTAGCGCCGATTAAACTTCCGCCGCCGCACGAGATACA GAAGCCACACAGTCCTACAAGACTGTTTCTGCTAATAGCCTTGTCAATGA TTTTTGGCATTGAGATGGGCTTCAAACTCTCCGGACAGTCAATGATTTTC GCCTTGAATCCATGTCATGTCCAGTCATGCCTGCAGATTTATCTTTTGGC CGCCAAGCCGACGAAGACGACAACAGCGCTCTTTCGTATACAGATGAGCA ATCTCAACGGCCCATTTCTGGCGTTTCTTTTCCCCGAGGTGGAGGGCCGC ACATATCCCTTCGAGCAGGCCACCTATTGGATCCAGCATGCACTGCTCTA TATAATACCGATTTACATTATCCGAAGCGGAGCGTACACTGTCGAGGACC TCAGCGAGTTCCACTGGTCACATATAGGTACCGCCTTCATGCTGTTTTAT CACTTCATCCTTCTCTCTCCGCTCTCAATTTTTACTGGTATCAATCTGGA CCACATGCTCTGTGCGGCTATGTCAGATCCGTTCCAGGGCTCGAATTACC GGATATTTGCGTGCTGCCACCAAGCACTGCTCTGTCCGCTGCTGAGTAAG GGCACAGTGGTGCTGTTCGGACGCCGGAATCGGAGCAGCAGCGGCCTGAC CGGATCGGGAAGTATGCCGGAGCCGAGGGGCGAGGCTGCCCAGTATCACC AATTAACCCAAGGTGACTATGCCATGCAGGAGGAGGCGATATTGCGACAC CGATTTAGCAACCAGGAAGCGGTGGACGATGGACATCCGCATGACGCAGG GGAAATGGCGTCCCTTACAGCAGAGTACACCATGCCAACAACCAAGATCG ACTAGTACTTACTGCGTCTAATATGCATGTCAATTCACGAGCCCCTACGG CTACGGTCCACGTTTTGCAGATAGCCGCATTGCCCGATCATACTAAAATA TGAAGGATTTGTGTGAGATCTAAGAGAGGTGAATGTATTTAACAAAGACG TGTAGATAATAACAAATAAGGCTAATTTTCATGCTCATCGAGGTTATACT TCTAAACAAAACCAACACCACTCAAGAGTTATCGAGTTATTTCTTACTTC GAAAAAAATCAAAAGTTACACCACTTCAATGGTTAATAATAGAGTACGTG TCTTAAATTGTAAGCCTGTAGCGATCAACAGATAAATTCAAAATTCAAAT CGAGCGCCAAGGGACGGGCAACTCTAAAGGTCTATGTTCGGTCTGGCAGC ACTGTCCGAGTGAACTGTGACCCGTTTATCTGCAGCTGTTGGTGAATCTT GAAATAAATAATAAATAGTCGAAACGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14591-RA | 1732 | CG14591-RA | 7..1732 | 2..1727 | 8630 | 100 | Plus |
CG14591-RB | 1876 | CG14591-RB | 305..1784 | 248..1727 | 7400 | 100 | Plus |
CG14591.a | 1644 | CG14591.a | 148..1627 | 248..1727 | 7400 | 100 | Plus |
CG14591-RB | 1876 | CG14591-RB | 20..267 | 2..249 | 1240 | 100 | Plus |
CG14591.a | 1644 | CG14591.a | 7..110 | 2..105 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1923728..1924574 | 1727..881 | 4160 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 1925241..1925579 | 586..248 | 1695 | 100 | Minus |
chr2R | 21145070 | chr2R | 1927247..1927488 | 249..2 | 1080 | 97.6 | Minus |
chr2R | 21145070 | chr2R | 1924987..1925183 | 780..584 | 985 | 100 | Minus |
chr2R | 21145070 | chr2R | 1924831..1924932 | 880..779 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 6036558..6037404 | 1727..881 | 4235 | 100 | Minus |
2R | 25286936 | 2R | 6038071..6038409 | 586..248 | 1695 | 100 | Minus |
2R | 25286936 | 2R | 6040082..6040329 | 249..2 | 1240 | 100 | Minus |
2R | 25286936 | 2R | 6037817..6038013 | 780..584 | 985 | 100 | Minus |
2R | 25286936 | 2R | 6037661..6037762 | 880..779 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 6037757..6038603 | 1727..881 | 4235 | 100 | Minus |
2R | 25260384 | 2R | 6039270..6039608 | 586..248 | 1695 | 100 | Minus |
2R | 25260384 | 2R | 6041281..6041528 | 249..2 | 1240 | 100 | Minus |
2R | 25260384 | 2R | 6039016..6039212 | 780..584 | 985 | 100 | Minus |
2R | 25260384 | 2R | 6038860..6038961 | 880..779 | 510 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib3 | 2883 | transib3 TRANSIB3 2883bp | 52..163 | 1600..1489 | 145 | 63.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1927247..1927488 | 1..249 | 97 | Minus | |
chr2R | 1923728..1924574 | 881..1727 | 99 | <- | Minus |
chr2R | 1924831..1924931 | 780..880 | 100 | <- | Minus |
chr2R | 1924988..1925180 | 587..779 | 100 | <- | Minus |
chr2R | 1925241..1925577 | 250..586 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RB | 1..999 | 257..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RC | 1..999 | 257..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RB | 1..999 | 257..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RB | 1..999 | 257..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RB | 1..999 | 257..1255 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RA | 6..1732 | 1..1727 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RA | 6..1732 | 1..1727 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RA | 5..1731 | 1..1727 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RA | 6..1732 | 1..1727 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14591-RA | 5..1731 | 1..1727 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6036558..6037404 | 881..1727 | 100 | <- | Minus |
2R | 6037661..6037761 | 780..880 | 100 | <- | Minus |
2R | 6037818..6038010 | 587..779 | 100 | <- | Minus |
2R | 6038071..6038407 | 250..586 | 100 | <- | Minus |
2R | 6040082..6040329 | 1..249 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6036558..6037404 | 881..1727 | 100 | <- | Minus |
2R | 6037661..6037761 | 780..880 | 100 | <- | Minus |
2R | 6037818..6038010 | 587..779 | 100 | <- | Minus |
2R | 6038071..6038407 | 250..586 | 100 | <- | Minus |
2R | 6040082..6040329 | 1..249 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6036558..6037404 | 881..1727 | 100 | <- | Minus |
2R | 6037661..6037761 | 780..880 | 100 | <- | Minus |
2R | 6037818..6038010 | 587..779 | 100 | <- | Minus |
2R | 6038071..6038407 | 250..586 | 100 | <- | Minus |
2R | 6040082..6040329 | 1..249 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1924063..1924909 | 881..1727 | 100 | <- | Minus |
arm_2R | 1925166..1925266 | 780..880 | 100 | <- | Minus |
arm_2R | 1925323..1925515 | 587..779 | 100 | <- | Minus |
arm_2R | 1925576..1925912 | 250..586 | 100 | <- | Minus |
arm_2R | 1927587..1927834 | 1..249 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 6037757..6038603 | 881..1727 | 100 | <- | Minus |
2R | 6038860..6038960 | 780..880 | 100 | <- | Minus |
2R | 6039017..6039209 | 587..779 | 100 | <- | Minus |
2R | 6039270..6039606 | 250..586 | 100 | <- | Minus |
2R | 6041281..6041528 | 1..249 | 99 | Minus |
Translation from 256 to 1254
> RH09039.pep MGWDWAVGGISDEIPRTTGPECINYMTDRRRWLETILLSALFIFIMHRSW QRLAPIKLPPPHEIQKPHSPTRLFLLIALSMIFGIEMGFKLSGQSMIFAL NPCHVQSCLQIYLLAAKPTKTTTALFRIQMSNLNGPFLAFLFPEVEGRTY PFEQATYWIQHALLYIIPIYIIRSGAYTVEDLSEFHWSHIGTAFMLFYHF ILLSPLSIFTGINLDHMLCAAMSDPFQGSNYRIFACCHQALLCPLLSKGT VVLFGRRNRSSSGLTGSGSMPEPRGEAAQYHQLTQGDYAMQEEAILRHRF SNQEAVDDGHPHDAGEMASLTAEYTMPTTKID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13824-PA | 341 | GF13824-PA | 1..341 | 1..332 | 1374 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10837-PA | 332 | GG10837-PA | 1..332 | 1..332 | 1620 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22818-PA | 325 | GH22818-PA | 1..325 | 1..332 | 1234 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14591-PD | 332 | CG14591-PD | 1..332 | 1..332 | 1773 | 100 | Plus |
CG14591-PC | 332 | CG14591-PC | 1..332 | 1..332 | 1773 | 100 | Plus |
CG14591-PB | 332 | CG14591-PB | 1..332 | 1..332 | 1773 | 100 | Plus |
CG14591-PA | 332 | CG14591-PA | 1..332 | 1..332 | 1773 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21194-PA | 330 | GI21194-PA | 1..330 | 1..332 | 1248 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17784-PA | 349 | GL17784-PA | 5..349 | 3..332 | 1393 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13101-PA | 349 | GA13101-PA | 5..349 | 3..332 | 1393 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16487-PA | 332 | GM16487-PA | 1..332 | 1..332 | 1727 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10339-PA | 332 | GD10339-PA | 1..332 | 1..332 | 1731 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20798-PA | 314 | GJ20798-PA | 1..314 | 1..332 | 1264 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22003-PA | 329 | GK22003-PA | 1..329 | 1..332 | 1310 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19431-PA | 332 | GE19431-PA | 1..332 | 1..332 | 1587 | 91.9 | Plus |
Translation from 256 to 1254
> RH09039.hyp MGWDWAVGGISDEIPRTTGPECINYMTDRRRWLETILLSALFIFIMHRSW QRLAPIKLPPPHEIQKPHSPTRLFLLIALSMIFGIEMGFKLSGQSMIFAL NPCHVQSCLQIYLLAAKPTKTTTALFRIQMSNLNGPFLAFLFPEVEGRTY PFEQATYWIQHALLYIIPIYIIRSGAYTVEDLSEFHWSHIGTAFMLFYHF ILLSPLSIFTGINLDHMLCAAMSDPFQGSNYRIFACCHQALLCPLLSKGT VVLFGRRNRSSSGLTGSGSMPEPRGEAAQYHQLTQGDYAMQEEAILRHRF SNQEAVDDGHPHDAGEMASLTAEYTMPTTKID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14591-PD | 332 | CG14591-PD | 1..332 | 1..332 | 1773 | 100 | Plus |
CG14591-PC | 332 | CG14591-PC | 1..332 | 1..332 | 1773 | 100 | Plus |
CG14591-PB | 332 | CG14591-PB | 1..332 | 1..332 | 1773 | 100 | Plus |
CG14591-PA | 332 | CG14591-PA | 1..332 | 1..332 | 1773 | 100 | Plus |