BDGP Sequence Production Resources |
Search the DGRC for RH09469
Library: | RH |
Tissue Source: | Drosophila melanogaster adult head |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2001-04-30 |
Comments: | Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 94 |
Well: | 69 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13369-RA |
Protein status: | RH09469.pep: gold |
Preliminary Size: | 1133 |
Sequenced Size: | 1182 |
Gene | Date | Evidence |
---|---|---|
CG13369 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13369 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13369 | 2005-03-04 | Blastp of sequenced clone |
CG13369 | 2008-04-29 | Release 5.5 accounting |
CG13369 | 2008-08-15 | Release 5.9 accounting |
CG13369 | 2008-12-18 | 5.12 accounting |
1182 bp (1182 high quality bases) assembled on 2005-03-04
GenBank Submission: BT021233
> RH09469.complete GACCTCTTCCCCGATCTCGGCCAGAAGCGGACTGGGCCAGTTGGCTGATA GTGCTCGTTCGGCTGCCCCGCTGTCGCCCTTCCCCTCCTCCACCGAGGTC AAGTAATCTCGAGTGATAAGCGGCAGTGAACTCTCGTCTCTGCTTCTCCA TTCCACAAGAAACTATAAATAACAGACTACCCACAAGAGACTAGTGCAAT TGCAGCAATGGCCCAAACGGAAGTGCTGGTGTTCGGCTCGGCCATCATTG ACTTTATAAGCTACACGACCCGTCTACCGAAAGCCGGAGAAACGCTCCAT GGGCATCGCTTTCAGATTGGCTACGGCGGCAAGGGCGCCAATCAGTGTGT GGCTGCCGCGCGCCAGGGATCCCGAACAGCTCTGGTGGCCAAACTGGGGG CAGACACATTCGGCAGCGACTACCTGAGACATCTGCGCGAGGAGCGCGTC AATGTAAACCACGTCGAGCAGCTGGCGGAGGAAACGACGGGCGTGGCCCA GATAGCCGTGTCAGATGGCGGCGAGAACAACATCATCATTGTGGTGGGCG CCAACAATCGACTGAGCTCGTGTGACGTTTCCTCGGCGAAGGCGCTCTTC CAGGAAGCCAAAGTTCTGGTGTGCCAGCTGGAGACGCCCGTTGAGGCCAC CCTGACCGCTCTGAGAGCCTTCCGGGGCGTGTCCATCGTCAATGCGGCTC CGGCCATGGCCGACACACCCCCCGAACTTCTTCAGTTGGCCAGCATCTTC TGTGTGAACGAAAGCGAGGCGGCACTGATGACTCAGATGCCCGACATTGG CAACATAGAGCACGCCGAAGATGCGGTTGGAAAGCTGATAGCGGCAGGTG CCAACACGGTGATCATAACTCTGGGCAAACTAGGAGCCGTTTTCGGTTCC GCCGACTCCAAGGGCGTGTGCCAGCATGTGGCTGCGCCGAGTGTGCCGCC CGAAAAAGTGGTGGACACGACGGGGGCTGGAGACGCCTTCATTGGGGCCT TGGCCCACAACTTGGCCCGTCATCCAACGAGGAAACTGGAGGAGCACATA GCCGCCGCCTGTGCCGTGGCCTCGCAATCCGTTCAGCTACCCGGGACGCA GTCGAGCTTCCCACACGCTTAGAGGGAAATCCCCAAAAGAATGCAACGCA ACAATAAATCTCTATCCTAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 517787..518338 | 259..810 | 2760 | 100 | Plus |
chrX | 22417052 | chrX | 518400..518758 | 810..1168 | 1780 | 99.7 | Plus |
chrX | 22417052 | chrX | 517469..517727 | 2..260 | 1295 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 517467..517727 | 1..260 | 99 | -> | Plus |
chrX | 517789..518337 | 261..809 | 100 | -> | Plus |
chrX | 518400..518758 | 810..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 1..915 | 208..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 1..915 | 208..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 1..915 | 208..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 1..915 | 208..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 1..915 | 208..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 8..1176 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 8..1176 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 7..1175 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 11..1179 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13369-RA | 7..1175 | 1..1168 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 623474..623734 | 1..260 | 99 | -> | Plus |
X | 623796..624344 | 261..809 | 100 | -> | Plus |
X | 624407..624765 | 810..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 623474..623734 | 1..260 | 99 | -> | Plus |
X | 623796..624344 | 261..809 | 100 | -> | Plus |
X | 624407..624765 | 810..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 623474..623734 | 1..260 | 99 | -> | Plus |
X | 623796..624344 | 261..809 | 100 | -> | Plus |
X | 624407..624765 | 810..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 517507..517767 | 1..260 | 99 | -> | Plus |
arm_X | 517829..518377 | 261..809 | 100 | -> | Plus |
arm_X | 518440..518798 | 810..1168 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 631572..631832 | 1..260 | 99 | -> | Plus |
X | 631894..632442 | 261..809 | 100 | -> | Plus |
X | 632505..632863 | 810..1168 | 100 | Plus |
Translation from 207 to 1121
> RH09469.hyp MAQTEVLVFGSAIIDFISYTTRLPKAGETLHGHRFQIGYGGKGANQCVAA ARQGSRTALVAKLGADTFGSDYLRHLREERVNVNHVEQLAEETTGVAQIA VSDGGENNIIIVVGANNRLSSCDVSSAKALFQEAKVLVCQLETPVEATLT ALRAFRGVSIVNAAPAMADTPPELLQLASIFCVNESEAALMTQMPDIGNI EHAEDAVGKLIAAGANTVIITLGKLGAVFGSADSKGVCQHVAAPSVPPEK VVDTTGAGDAFIGALAHNLARHPTRKLEEHIAAACAVASQSVQLPGTQSS FPHA*
Translation from 207 to 1121
> RH09469.pep MAQTEVLVFGSAIIDFISYTTRLPKAGETLHGHRFQIGYGGKGANQCVAA ARQGSRTALVAKLGADTFGSDYLRHLREERVNVNHVEQLAEETTGVAQIA VSDGGENNIIIVVGANNRLSSCDVSSAKALFQEAKVLVCQLETPVEATLT ALRAFRGVSIVNAAPAMADTPPELLQLASIFCVNESEAALMTQMPDIGNI EHAEDAVGKLIAAGANTVIITLGKLGAVFGSADSKGVCQHVAAPSVPPEK VVDTTGAGDAFIGALAHNLARHPTRKLEEHIAAACAVASQSVQLPGTQSS FPHA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22103-PA | 311 | GF22103-PA | 12..311 | 5..304 | 1232 | 78.7 | Plus |
Dana\GF14193-PA | 519 | GF14193-PA | 6..302 | 5..302 | 562 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12798-PA | 304 | GG12798-PA | 1..304 | 1..304 | 1449 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12089-PA | 306 | GH12089-PA | 6..301 | 5..302 | 1115 | 72.8 | Plus |
Dgri\GH13082-PA | 372 | GH13082-PA | 6..301 | 5..302 | 690 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13369-PA | 304 | CG13369-PA | 1..304 | 1..304 | 1527 | 100 | Plus |
CG17010-PA | 429 | CG17010-PA | 6..301 | 5..302 | 685 | 48 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11097-PA | 304 | GI11097-PA | 6..304 | 5..304 | 967 | 63.3 | Plus |
Dmoj\GI21538-PA | 437 | GI21538-PA | 2..299 | 3..302 | 676 | 45 | Plus |
Dmoj\GI21549-PA | 1459 | GI21549-PA | 2..299 | 3..302 | 642 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21383-PA | 318 | GL21383-PA | 4..219 | 3..218 | 845 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12236-PA | 303 | GA12236-PA | 4..303 | 3..304 | 1165 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19077-PA | 304 | GM19077-PA | 1..304 | 1..304 | 1496 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16516-PA | 317 | GD16516-PA | 1..277 | 1..276 | 1274 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15781-PA | 305 | GJ15781-PA | 6..304 | 5..303 | 1056 | 68.9 | Plus |
Dvir\GJ17488-PA | 376 | GJ17488-PA | 2..299 | 3..302 | 677 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25613-PA | 310 | GK25613-PA | 7..307 | 5..304 | 1122 | 77.1 | Plus |
Dwil\GK14853-PA | 280 | GK14853-PA | 6..247 | 5..246 | 618 | 47.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16624-PA | 304 | GE16624-PA | 1..304 | 1..304 | 1439 | 90.1 | Plus |