RH09582.complete Sequence
1085 bp (1085 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089652
> RH09582.complete
GAGTGTGTGAGTCGCGATAAACGCGAGCGAAACGGGCGGCGCAACTGAAA
TCGCGTACCGACTGGCGCAGACACGCACACCACCGCACAACAGCGCGTAT
ACGTATACGGGCGAGAGAGCGCATGCTCTCCGCCACACACACGCGGTCAA
CGTTTTCTCCGCTTTGTGGCGCCGCGCAAGTTTTGTCGCAGCAGCAAACA
CGCAATAAAAGTTCAAAAACAGTTGAAGTATACCGCGACGCGAGTAAAAA
TCTTTCCTTCGACGTCGTCTCTGTTCGTTGTAGTAGTTGTTGTTGCTGCT
GTTGTTCTTGTTGCTGCTACTGCCGCTGCTTAACGTTTCTATAGTGTGTT
CCGTTCCGCGAATTCTCATGTGCATTTATGAAGATATACATATATATATA
TATACATATATCTGCATATATGACTGACCAAAAGATTCTCCACCGCTCTG
GATATGCGAACAAAGTCCTTAGCTGCAGCGACATTAGTTTAAATTTCAAG
CCGGCTATCGCATGGTGATTCCACCTGCACGTGCAAAGCGCGACTGTGGA
TATCGCAGGACGAGAGTCGCGTCTTCTCCTGCGAGGAGCAACTGCATCAT
AATCATAGCCACAGATTGAAAAGACCGAAAGCAGATGCAAGCTCAACGAC
AGGACTAAGAATCGGAAGCAAAACTTCCCCAAAGCAATGGCACAATACAC
CCGGAAACGCAAAAGAAAGAAATTTAAAGAGCTGAAAGCCCCGTGGACTT
CATGAACCCAGGTGCAACAAATAATTTCAAGGAGAAGATGTTTTTGTGGT
CAAAAACGTGCAGATGACTTCTAAGAAGTTGGAAAATCATGTATTTACTC
GGAAAGAAGCCAGAACTGAAGTAGCATACTTATTAGTATTATCAAATGAT
GAGTTTTTTCATCATAGTTTTAGTTCTATATTTATAGAAAAAAAAAACTT
TCCTTGTTACTTTTAGTTTTTTCATTTGAAAGACTGCCGTTGACTTTTTC
ATTTTATTCGCGTGCATATTAAATATGTGTGTTAAATATACATAATAATA
AATGATCGCTGTGTTTATGCAAAAAAAAAAAAAAA
RH09582.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:24:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32711-RA | 1294 | CG32711-RA | 180..1249 | 2..1071 | 5350 | 100 | Plus |
CG32711.a | 1259 | CG32711.a | 73..765 | 2..694 | 3465 | 100 | Plus |
CG32711-RB | 1343 | CG32711-RB | 708..1343 | 435..1070 | 3180 | 100 | Plus |
CG32711-RB | 1343 | CG32711-RB | 15..447 | 2..434 | 2165 | 100 | Plus |
CG32711.a | 1259 | CG32711.a | 838..1214 | 695..1071 | 1885 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:46:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 8301412..8301844 | 434..2 | 2165 | 100 | Minus |
chrX | 22417052 | chrX | 8299755..8300071 | 1070..754 | 1585 | 100 | Minus |
chrX | 22417052 | chrX | 8300266..8300527 | 694..433 | 1310 | 100 | Minus |
chrX | 22417052 | chrX | 8300134..8300193 | 754..695 | 300 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:21:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:46:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8409663..8410095 | 434..2 | 2165 | 100 | Minus |
X | 23542271 | X | 8408007..8408324 | 1071..754 | 1590 | 100 | Minus |
X | 23542271 | X | 8408519..8408780 | 694..433 | 1310 | 100 | Minus |
X | 23542271 | X | 8408387..8408446 | 754..695 | 300 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 8417761..8418193 | 434..2 | 2165 | 100 | Minus |
X | 23527363 | X | 8416105..8416422 | 1071..754 | 1590 | 100 | Minus |
X | 23527363 | X | 8416617..8416878 | 694..433 | 1310 | 100 | Minus |
X | 23527363 | X | 8416485..8416544 | 754..695 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 19:46:46 has no hits.
RH09582.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:47:42 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 8299755..8300071 | 754..1070 | 100 | <- | Minus |
chrX | 8300135..8300193 | 695..753 | 100 | <- | Minus |
chrX | 8300266..8300525 | 435..694 | 100 | <- | Minus |
chrX | 8301412..8301844 | 1..434 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:40:54 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 1..222 | 123..344 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:37:05 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RB | 1..222 | 123..344 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:34:08 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 1..222 | 123..344 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:08:06 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 1..222 | 123..344 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:42:18 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RD | 1..222 | 123..344 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:02:25 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 1..1069 | 2..1070 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:37:05 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 1..1069 | 2..1070 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:08 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RC | 1563..2632 | 1..1070 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:08:06 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32711-RA | 1..1069 | 2..1070 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:42:18 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lawc-RC | 1563..2632 | 1..1070 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:47:42 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8408008..8408324 | 754..1070 | 100 | <- | Minus |
X | 8408388..8408446 | 695..753 | 100 | <- | Minus |
X | 8408519..8408778 | 435..694 | 100 | <- | Minus |
X | 8409663..8410095 | 1..434 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:47:42 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8408008..8408324 | 754..1070 | 100 | <- | Minus |
X | 8408388..8408446 | 695..753 | 100 | <- | Minus |
X | 8408519..8408778 | 435..694 | 100 | <- | Minus |
X | 8409663..8410095 | 1..434 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:47:42 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8408008..8408324 | 754..1070 | 100 | <- | Minus |
X | 8408388..8408446 | 695..753 | 100 | <- | Minus |
X | 8408519..8408778 | 435..694 | 100 | <- | Minus |
X | 8409663..8410095 | 1..434 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:08 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8302041..8302357 | 754..1070 | 100 | <- | Minus |
arm_X | 8302421..8302479 | 695..753 | 100 | <- | Minus |
arm_X | 8302552..8302811 | 435..694 | 100 | <- | Minus |
arm_X | 8303696..8304128 | 1..434 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:42:08 Download gff for
RH09582.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8416106..8416422 | 754..1070 | 100 | <- | Minus |
X | 8416486..8416544 | 695..753 | 100 | <- | Minus |
X | 8416617..8416876 | 435..694 | 100 | <- | Minus |
X | 8417761..8418193 | 1..434 | 99 | | Minus |
RH09582.hyp Sequence
Translation from 122 to 343
> RH09582.hyp
MLSATHTRSTFSPLCGAAQVLSQQQTRNKSSKTVEVYRDASKNLSFDVVS
VRCSSCCCCCCSCCCYCRCLTFL*
RH09582.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:57:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-PA | 73 | CG32711-PA | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PB | 73 | CG32711-PB | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PD | 73 | CG32711-PD | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PC | 73 | CG32711-PC | 1..73 | 1..73 | 406 | 100 | Plus |
RH09582.pep Sequence
Translation from 122 to 343
> RH09582.pep
MLSATHTRSTFSPLCGAAQVLSQQQTRNKSSKTVEVYRDASKNLSFDVVS
VRCSSCCCCCCSCCCYCRCLTFL*
RH09582.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:52:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19054-PA | 66 | GG19054-PA | 1..56 | 1..56 | 264 | 98.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lawc-PA | 73 | CG32711-PA | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PB | 73 | CG32711-PB | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PD | 73 | CG32711-PD | 1..73 | 1..73 | 406 | 100 | Plus |
lawc-PC | 73 | CG32711-PC | 1..73 | 1..73 | 406 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:52:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM21398-PA | 68 | GM21398-PA | 1..54 | 1..54 | 230 | 96.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:52:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24572-PA | 77 | GD24572-PA | 1..54 | 1..54 | 251 | 96.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:52:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17458-PA | 69 | GE17458-PA | 1..69 | 1..73 | 258 | 89 | Plus |